CsGy5G000430 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G000430
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein BOBBER 1
Location	Gy14Chr5: 244590 .. 246662 (+)
RNA-Seq Expression	CsGy5G000430
Synteny	CsGy5G000430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTATTAGAGACTGATCTCTAAAACCCTCATCCAACCGGACCCATCATAGTCAGCGATTTAGCAATTCCCTTCATTTCTTCGCCATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAAATCCCGAAGCCAAAGAAGCCTTCCTCTTCCTCTTCCTCCTCTCCATCATCATCTTCATCGCCCAAGCCTTCTCAATTCAATGCCAGCTTTGACCCTTCAAACCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTTGTGCGTAGAGCTGTCGAGAAGAGAAAGAAGCATGATGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGGAGGAAGCTGCGCCGGTGAAGGCTGCTGCATCACCGCCGGAAGAGAAAGTGGGTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGGCAAGAGGTGAGCATTTCTCTTCTCTTCCTCTACTTGTTTGTTCTCTATTATGTGAAATTGTTATTTGTGTTGGATTGACTTGATTGATCTCACACTATCTGGAAGTGGTAAAGGGAGGGTAAACATTCATTAATTAAAATGATTGTTTGTTCTTAAATCTTAGTCAGTCAAGTGTGGCTAGATTTAACTGTTAATTGTGCTTTCAACAGGCAAGATTTGGCAATGGTAGTGAAGAAATTTGCATTGGTGATGTACCATTAGGGACAGCAATTCCATAATTCTTAGTTTGTATCGTCAATGGTTTTAGTTTGTAGTTAGCAAGTTGTTTACTTGGTTAGTGGGGTGTAGGTTAATCATAATAAATATTCATCCTATGTTCTCCGAGACTCCCTCCCTTGAATTCACAGTTCGACCTTTTGAGTTGTTCAATGTGGCCTCGAGTTCATAAGTCTTGATTGAATTTTAAGTTTAGAAGGGAAATATTTGAAATACTATTCTATTCTAGCCATATCGCGAGTTAGAAGTTATATCAATTTTTAAGGGGTATTTGGAGGGCGGAGTTAATTATTATAGTCCATGAGTTTAAATAGTTTGTTATTGGGCTGCAGACGGTTTTAGTCTCGTTATGAGGGACCTGAAATGGTAATACAGTAGGTAATGGTAGATTATAATAATTGGGAACTCCAACTGCTATAATTGGAACCCTAAACAAGGGGTGGGCTATTATAACCCACCCAAACTCTTCCTAGCGGGTTCAAGTAAATGGTTTAAGTTGATTTATTTGGAATATGTGTATGTGTGTGGATATTGGAAACCATTCTTCAGTTGAGTAAACTTATATGGAAGATTTAACTGCTGGTGTGGAGTTTGAAATTTATCATTTTGGATCGAGCATGATAATCTCTTCATGCAGTTTGATAGTTTCTGTCTTTTCTTTTCATAATGCATATGCTTCTGCACAAGATATCTAGAATTCCTCTGGAACTTAGAATTCAGTGTGAGGCTCATCGTATCAAATTTGTGAAATAAATCTTTTGTGTTGTGAGTTCAACTGACTGACCCTATCTTTTGTTTCTAAACTGAATGTCATCTCAACTTTGTTTCTTACTTCTAATGGATTTTGCAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGTATGTTTTCTCCACAGAATCTTGTTTCAACAGGGTGTTATTTTTTATTTTCAAGTTCTAAATTATCATCACATGCTTGCAGGCAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGGTACTTGAAGTTTTGTTAATAAATAAGTGTGAATGATGTTAAATTCTCTTTTAGATATGGTTTATTTTTATGCTGCTCAAGTCCTTGGGAGTTGATAGCATAAATAAGAAGGGTGGATGCACAAAGTTA

mRNA sequence

CGTATTAGAGACTGATCTCTAAAACCCTCATCCAACCGGACCCATCATAGTCAGCGATTTAGCAATTCCCTTCATTTCTTCGCCATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAAATCCCGAAGCCAAAGAAGCCTTCCTCTTCCTCTTCCTCCTCTCCATCATCATCTTCATCGCCCAAGCCTTCTCAATTCAATGCCAGCTTTGACCCTTCAAACCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTTGTGCGTAGAGCTGTCGAGAAGAGAAAGAAGCATGATGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGGAGGAAGCTGCGCCGGTGAAGGCTGCTGCATCACCGCCGGAAGAGAAAGTGGGTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGGCAAGAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGCAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGGTACTTGAAGTTTTGTTAATAAATAAGTGTGAATGATGTTAAATTCTCTTTTAGATATGGTTTATTTTTATGCTGCTCAAGTCCTTGGGAGTTGATAGCATAAATAAGAAGGGTGGATGCACAAAGTTA

Coding sequence (CDS)

ATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAAATCCCGAAGCCAAAGAAGCCTTCCTCTTCCTCTTCCTCCTCTCCATCATCATCTTCATCGCCCAAGCCTTCTCAATTCAATGCCAGCTTTGACCCTTCAAACCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTTGTGCGTAGAGCTGTCGAGAAGAGAAAGAAGCATGATGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGGAGGAAGCTGCGCCGGTGAAGGCTGCTGCATCACCGCCGGAAGAGAAAGTGGGTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGGCAAGAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGCAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGGTACTTGA

Protein sequence

MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIGT*

Homology

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BLAST of CsGy5G000430 vs. ExPASy Swiss-Prot
Match: Q9LV09 (Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.8e-45
Identity = 119/227 (52.42%), Postives = 148/227 (65.20%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+ EE+                 SSSS P    F A+   +NPLGFLEKVFDFL  
Sbjct: 1   MAIISEVEEE-----------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLGE 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHD------ESLE-LKGKAEKRIKEEV-KSVKEE 120
           ++DFL K   E +I   VR A EK KK +      ES++ ++ KAEK I + V K V++E
Sbjct: 61  QSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKE 120

Query: 121 AAPVKAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVP 180
           +     AAS  E    EK +E  EE+K+E+G  VPNKGNG D++NYSW Q+LQEV VN+P
Sbjct: 121 SVKPTIAASSAEPIEVEKPKE--EEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIP 180

Query: 181 VPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 220
           VP GTK+R VVCEIKKNRLKVGLKGQ P++D EL  +VKPDDCYW+I
Sbjct: 181 VPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNI 208

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BLAST of CsGy5G000430 vs. ExPASy Swiss-Prot
Match: Q9STN7 (Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-37
Identity = 91/196 (46.43%), Postives = 129/196 (65.82%), Query Frame = 0


Query: 26  SPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKR 85
           S    + P    F ASFDPSNP+ FLEKV D +  E++FL KD  EK+I   V  A ++R
Sbjct: 5   SEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAV-MAAKQR 64

Query: 86  KKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAASPPEEKV--GEKLEENTEEKKEENG 145
            +  E  +L+ ++ K +  EV+  K+++        P EE +   + +E    ++++E+G
Sbjct: 65  LREAEKKKLEKESVKSM--EVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESG 124

Query: 146 ARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 205
             VPNKGNGLD + YSW Q+LQEV +N+P+P+GTKSR V CEIKKNRLKVGLKGQ  ++D
Sbjct: 125 PIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVD 184

Query: 206 AELCHTVKPDDCYWSI 220
            E  ++VKPDDC+W+I
Sbjct: 185 GEFFNSVKPDDCFWNI 197

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BLAST of CsGy5G000430 vs. ExPASy Swiss-Prot
Match: Q5ZIN1 (Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 69/196 (35.20%), Postives = 99/196 (50.51%), Query Frame = 0


Query: 49  GFLEK-VFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKA-----EKRI 108
           G  EK + D   +      K+R EK      R+  E+R+K + + +L  +A     E RI
Sbjct: 54  GVAEKLITDSFNHHNKLAQKERKEKK----ARQEAERREKAERAAKLAKEAKQEANEPRI 113

Query: 109 KE-----------EVKSVKE-----EAAPVKAAASPPEEKVGEKLEENTEEKKE-ENGAR 168
           KE           E+   KE        PVK++    +     K E + EEK E + G  
Sbjct: 114 KELTDEEAERLQLEIDQKKEAQKEVNNVPVKSSEDDGDSSDSNKQETDDEEKDENDKGKL 173

Query: 169 VPNKGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 220
            PN GNG D+ NY WTQ+L E+++ +P  V    K + VV +I++ RL+VGLKG PPVID
Sbjct: 174 KPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVID 233

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BLAST of CsGy5G000430 vs. ExPASy Swiss-Prot
Match: O35685 (Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.5e-12
Identity = 59/209 (28.23%), Postives = 91/209 (43.54%), Query Frame = 0


Query: 55  FDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAA 114
           F FL  +TDF          E +  + + +   H   L  K + EKR ++E +  ++   
Sbjct: 33  FSFLRRKTDFFIGGE-----EGMAEKLITQTFNHHNQLAQKARREKRARQETERREKAER 92

Query: 115 PVKAAASPPEEKVGEKLEENTEEKKE---------------------------------- 174
             + A     E  G +++E T+E+ E                                  
Sbjct: 93  AARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAEDQEAQLKNGSLDSPGKQDAED 152

Query: 175 --------ENGARVPNKGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNR 220
                   + G   PN GNG D+ NY WTQ+L E+++ VP  V    K + VV +I++  
Sbjct: 153 EEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRH 212

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BLAST of CsGy5G000430 vs. ExPASy Swiss-Prot
Match: Q17QG2 (Nuclear migration protein nudC OS=Bos taurus OX=9913 GN=NUDC PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.5e-12
Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 93  ELKGKAEKRIKEEVKSVK----EEAAPVKAAASPPEEKVGEKLEENTEEKKEENGARVPN 152
           EL  +  +R++ E+   K    +EA     +   P ++  E+ EE  +EK  + G   PN
Sbjct: 106 ELTDEEAERLQLEIDQKKDAENQEAQLKNGSLGSPGKQEAEEEEEEDDEK--DKGKLKPN 165

Query: 153 KGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAEL 212
            GNG D+ +Y WTQ+L E+++ VP  V    K + VV +I++  L+VGLKGQP ++D EL
Sbjct: 166 LGNGADLPSYRWTQTLSELDLAVPFCVNFRLKGKDVVVDIQRRHLRVGLKGQPAIVDGEL 225

Query: 213 CHTVKPDDCYWSI 220
            + VK ++  W I
Sbjct: 226 YNEVKVEESSWLI 236

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BLAST of CsGy5G000430 vs. NCBI nr
Match: XP_011654620.1 (protein BOBBER 1 [Cucumis sativus] >KGN49866.1 hypothetical protein Csa_000528 [Cucumis sativus])

HSP 1 Score: 413 bits (1061), Expect = 1.78e-143
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219

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BLAST of CsGy5G000430 vs. NCBI nr
Match: XP_008437594.1 (PREDICTED: protein BOBBER 1 [Cucumis melo] >KAA0042552.1 protein BOBBER 1 [Cucumis melo var. makuwa] >TYK05956.1 protein BOBBER 1 [Cucumis melo var. makuwa])

HSP 1 Score: 384 bits (987), Expect = 3.05e-132
Identity = 205/219 (93.61%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPK+PSSSSS  PSSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSS--PSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLS DRVEKDIETVVRRAVEKRKKH+ESLELKGKAEKRIKEEVKSVK+EAAP KA A
Sbjct: 61  ETDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEE TEEKKE+NG RVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           FVVCEIKKNRLKVGLKGQPPVID ELCHTVKPDDCYWSI
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSI 217

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BLAST of CsGy5G000430 vs. NCBI nr
Match: XP_038874468.1 (protein BOBBER 1 [Benincasa hispida])

HSP 1 Score: 354 bits (909), Expect = 2.09e-120
Identity = 193/220 (87.73%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEI KPKKPSSSSS  PSSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISEYEEKEEISKPKKPSSSSS--PSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLS+DRVEKDIETVVRRAVEKRKKH+ES ELKGKAEKRIKEEV+S+K+E   VKA A
Sbjct: 61  ETDFLSRDRVEKDIETVVRRAVEKRKKHEESFELKGKAEKRIKEEVRSIKQE---VKAVA 120

Query: 121 SPPEEKVGEKLEENTEE-KKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKS 180
           SPPEEK+  KLEENTEE KKE NG R PN+GNGLDMDNYSWTQSLQEVNVNVPVPKGTK+
Sbjct: 121 SPPEEKLDVKLEENTEEEKKEANGPRAPNRGNGLDMDNYSWTQSLQEVNVNVPVPKGTKA 180

Query: 181 RFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           RFVVCEIKKNRLKVGLKGQPPVID ELCH VKPDDCYWSI
Sbjct: 181 RFVVCEIKKNRLKVGLKGQPPVIDGELCHIVKPDDCYWSI 215

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BLAST of CsGy5G000430 vs. NCBI nr
Match: KAG7035749.1 (Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345 bits (885), Expect = 1.31e-116
Identity = 188/225 (83.56%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSSSP SSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQ+LQEVN+NVPVP
Sbjct: 121 EPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSI
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSI 225

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BLAST of CsGy5G000430 vs. NCBI nr
Match: XP_022995953.1 (protein BOBBER 1-like [Cucurbita maxima])

HSP 1 Score: 342 bits (878), Expect = 1.46e-115
Identity = 189/225 (84.00%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQSLQEVN+NVPVP
Sbjct: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSI
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSI 224

[Close]

BLAST of CsGy5G000430 vs. ExPASy TrEMBL
Match: A0A0A0KQ62 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 8.64e-144
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219

[Close]

BLAST of CsGy5G000430 vs. ExPASy TrEMBL
Match: A0A5A7TGM4 (Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00490 PE=4 SV=1)

HSP 1 Score: 384 bits (987), Expect = 1.48e-132
Identity = 205/219 (93.61%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPK+PSSSSS  PSSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSS--PSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLS DRVEKDIETVVRRAVEKRKKH+ESLELKGKAEKRIKEEVKSVK+EAAP KA A
Sbjct: 61  ETDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEE TEEKKE+NG RVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           FVVCEIKKNRLKVGLKGQPPVID ELCHTVKPDDCYWSI
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSI 217

[Close]

BLAST of CsGy5G000430 vs. ExPASy TrEMBL
Match: A0A1S3AUE5 (protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1)

HSP 1 Score: 384 bits (987), Expect = 1.48e-132
Identity = 205/219 (93.61%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPK+PSSSSS  PSSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSS--PSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLS DRVEKDIETVVRRAVEKRKKH+ESLELKGKAEKRIKEEVKSVK+EAAP KA A
Sbjct: 61  ETDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEE TEEKKE+NG RVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           FVVCEIKKNRLKVGLKGQPPVID ELCHTVKPDDCYWSI
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSI 217

[Close]

BLAST of CsGy5G000430 vs. ExPASy TrEMBL
Match: A0A6J1K9G4 (protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491313 PE=4 SV=1)

HSP 1 Score: 342 bits (878), Expect = 7.08e-116
Identity = 189/225 (84.00%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQSLQEVN+NVPVP
Sbjct: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSI
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSI 224

[Close]

BLAST of CsGy5G000430 vs. ExPASy TrEMBL
Match: A0A6J1H279 (protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459706 PE=4 SV=1)

HSP 1 Score: 335 bits (860), Expect = 3.98e-113
Identity = 184/225 (81.78%), Postives = 198/225 (88.00%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSSS  SSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSAPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ES+ELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESIELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             +  ASP E KV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQ+LQEVN+NVPVP
Sbjct: 121 EPRNVASPSEGKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 219
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSI
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSI 225

[Close]

BLAST of CsGy5G000430 vs. TAIR 10
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.7e-46
Identity = 119/227 (52.42%), Postives = 148/227 (65.20%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+ EE+                 SSSS P    F A+   +NPLGFLEKVFDFL  
Sbjct: 1   MAIISEVEEE-----------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLGE 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHD------ESLE-LKGKAEKRIKEEV-KSVKEE 120
           ++DFL K   E +I   VR A EK KK +      ES++ ++ KAEK I + V K V++E
Sbjct: 61  QSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKE 120

Query: 121 AAPVKAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVP 180
           +     AAS  E    EK +E  EE+K+E+G  VPNKGNG D++NYSW Q+LQEV VN+P
Sbjct: 121 SVKPTIAASSAEPIEVEKPKE--EEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIP 180

Query: 181 VPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSI 220
           VP GTK+R VVCEIKKNRLKVGLKGQ P++D EL  +VKPDDCYW+I
Sbjct: 181 VPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNI 208

[Close]

BLAST of CsGy5G000430 vs. TAIR 10
Match: AT4G27890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 7.1e-39
Identity = 91/196 (46.43%), Postives = 129/196 (65.82%), Query Frame = 0


Query: 26  SPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKR 85
           S    + P    F ASFDPSNP+ FLEKV D +  E++FL KD  EK+I   V  A ++R
Sbjct: 5   SEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAV-MAAKQR 64

Query: 86  KKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAASPPEEKV--GEKLEENTEEKKEENG 145
            +  E  +L+ ++ K +  EV+  K+++        P EE +   + +E    ++++E+G
Sbjct: 65  LREAEKKKLEKESVKSM--EVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESG 124

Query: 146 ARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 205
             VPNKGNGLD + YSW Q+LQEV +N+P+P+GTKSR V CEIKKNRLKVGLKGQ  ++D
Sbjct: 125 PIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVD 184

Query: 206 AELCHTVKPDDCYWSI 220
            E  ++VKPDDC+W+I
Sbjct: 185 GEFFNSVKPDDCFWNI 197

[Close]

BLAST of CsGy5G000430 vs. TAIR 10
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-08
Identity = 20/62 (32.26%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 158 YSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYW 217
           + W Q+L+EVN+ + +P     +   C+I+   ++VG+KG PP ++ +L   VK D  +W
Sbjct: 21  FEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGNPPYLNHDLSAPVKTDCSFW 80

Query: 218 SI 220
           ++
Sbjct: 81  TL 82

[Close]

BLAST of CsGy5G000430 vs. TAIR 10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 52.0 bits (123), Expect = 7.2e-07
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 38  FNASFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGK 97
           F+ASF+PSNPLGFLE V DF+  E++FL KD  EK+I   V  A E+ ++ ++  E    
Sbjct: 11  FSASFNPSNPLGFLENVLDFIGKESNFLRKDTAEKEITDAVTTAKERLRETEKKTE---- 70

Query: 98  AEKRIKEEVKSVKEEAAPVKAAASPPE 125
                  +V+ V+    P  A+  P +
Sbjct: 71  -----SMDVEKVRPSTLPFNASFDPSD 88

The following BLAST results are available for this feature:

BLAST of CsGy5G000430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV09	3.8e-45	52.42	Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1	[more]
Q9STN7	1.0e-37	46.43	Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1	[more]
Q5ZIN1	2.0e-14	35.20	Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1	[more]
O35685	5.5e-12	28.23	Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1	[more]
Q17QG2	9.5e-12	36.09	Nuclear migration protein nudC OS=Bos taurus OX=9913 GN=NUDC PE=2 SV=1	[more]

BLAST of CsGy5G000430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654620.1	1.78e-143	100.00	protein BOBBER 1 [Cucumis sativus] >KGN49866.1 hypothetical protein Csa_000528 [...	[more]
XP_008437594.1	3.05e-132	93.61	PREDICTED: protein BOBBER 1 [Cucumis melo] >KAA0042552.1 protein BOBBER 1 [Cucum...	[more]
XP_038874468.1	2.09e-120	87.73	protein BOBBER 1 [Benincasa hispida]	[more]
KAG7035749.1	1.31e-116	83.56	Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022995953.1	1.46e-115	84.00	protein BOBBER 1-like [Cucurbita maxima]	[more]

BLAST of CsGy5G000430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ62	8.64e-144	100.00	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=...	[more]
A0A5A7TGM4	1.48e-132	93.61	Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G004...	[more]
A0A1S3AUE5	1.48e-132	93.61	protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1	[more]
A0A6J1K9G4	7.08e-116	84.00	protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491313 PE=4 SV=1	[more]
A0A6J1H279	3.98e-113	81.78	protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459706 PE=4 SV=1	[more]

BLAST of CsGy5G000430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53400.1	2.7e-46	52.42	HSP20-like chaperones superfamily protein	[more]
AT4G27890.1	7.1e-39	46.43	HSP20-like chaperones superfamily protein	[more]
AT5G58740.1	3.8e-08	32.26	HSP20-like chaperones superfamily protein	[more]
AT2G27280.1	7.2e-07	37.93	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 141..221 e-value: 6.8E-25 score: 89.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 140..220
IPR007052	CS domain	PFAM	PF04969	CS	coord: 157..219 e-value: 1.7E-16 score: 61.0
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 153..221 score: 12.577467
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..152
None	No IPR available	PANTHER	PTHR12356:SF25	PROTEIN BOBBER 2	coord: 33..219
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 158..219 e-value: 1.91198E-27 score: 98.0033
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 33..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G000430.2	CsGy5G000430.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051082	unfolded protein binding