Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTTTCCACCCAACTTCTAGAGCTTGGAAGGCTTGAGAAGAAGGGAAAAAAGAGGATCAAAAGAGAAAGTTTAAAGAGAGAAAACAATGGCTATTATTCATACAAGGATGTGAGTGACAATGAAGAGCATGGAGAGAGTAAGGGAAGAAGAAGAAGAAAAAGAAGAAAGAAGGGTCAATTTGGGACTACAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGTCATATACTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTTTGAAGATGAGAGGATGAAGAAGAATGAAGTGATTTCTATTGATCCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTATGGCTAATTGTATGTAA
mRNA sequence
ATGTCTGTTTCCACCCAACTTCTAGAGCTTGGAAGGCTTGAGAAGAAGGGAAAAAAGAGGATCAAAAGAGAAAGTTTAAAGAGAGAAAACAATGGCTATTATTCATACAAGGATGTGAGTGACAATGAAGAGCATGGAGAGAGTAAGGGAAGAAGAAGAAGAAAAAGAAGAAAGAAGGGTCAATTTGGGACTACAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGTCATATACTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTTTGAAGATGAGAGGATGAAGAAGAATGAAGTGATTTCTATTGATCCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTATGGCTAATTGTATGTAA
Coding sequence (CDS)
ATGTCTGTTTCCACCCAACTTCTAGAGCTTGGAAGGCTTGAGAAGAAGGGAAAAAAGAGGATCAAAAGAGAAAGTTTAAAGAGAGAAAACAATGGCTATTATTCATACAAGGATGTGAGTGACAATGAAGAGCATGGAGAGAGTAAGGGAAGAAGAAGAAGAAAAAGAAGAAAGAAGGGTCAATTTGGGACTACAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGTCATATACTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTTTGAAGATGAGAGGATGAAGAAGAATGAAGTGATTTCTATTGATCCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTATGGCTAATTGTATGTAA
Protein sequence
MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPVLPYTTMANCM*
Homology
BLAST of CsGy4G025815 vs. NCBI nr
Match:
KGN55571.1 (hypothetical protein Csa_012627 [Cucumis sativus])
HSP 1 Score: 262 bits (669), Expect = 3.78e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60
MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG
Sbjct: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60
Query: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120
QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV
Sbjct: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120
Query: 121 LPYTTMANCM 130
LPYTTMANCM
Sbjct: 121 LPYTTMANCM 130
BLAST of CsGy4G025815 vs. NCBI nr
Match:
TYK01842.1 (hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa])
HSP 1 Score: 226 bits (576), Expect = 7.27e-74
Identity = 113/130 (86.92%), Postives = 121/130 (93.08%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60
MS+STQLL LGRLEKKG+KRIKRES KRE NGYYSYK+VSDN EHG+SKGRRRR+RRKKG
Sbjct: 1 MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60
Query: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120
QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDA+EDERM + SIDPYFSMPV
Sbjct: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120
Query: 121 LPYTTMANCM 130
LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126
BLAST of CsGy4G025815 vs. NCBI nr
Match:
KAA0052276.1 (hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa])
HSP 1 Score: 225 bits (573), Expect = 2.08e-73
Identity = 112/130 (86.15%), Postives = 121/130 (93.08%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60
MS+STQLL LGRLEKKG+K+IKRES KRE NGYYSYK+VSDN EHG+SKGRRRR+RRKKG
Sbjct: 1 MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60
Query: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120
QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDA+EDERM + SIDPYFSMPV
Sbjct: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120
Query: 121 LPYTTMANCM 130
LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126
BLAST of CsGy4G025815 vs. NCBI nr
Match:
KAG6608012.1 (hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 158 bits (400), Expect = 4.52e-47
Identity = 86/136 (63.24%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVS--DNEEHGESKGRRRRK--- 60
MSVS Q+L L L+KK KK +RE L+RE G++S ++E+ G+ KGRRR K
Sbjct: 1 MSVSIQVLGLTSLQKKEKKCHRREILERERTGHFSTSQHGHHESEQPGDGKGRRREKKQG 60
Query: 61 -RRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDP 120
RRK QFG R VL N WYFTSTIS+ILRKAKAFYNECCCDA+EDERMK+ EV +DP
Sbjct: 61 RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120
Query: 121 YFSMPVLPYTTMANCM 130
YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136
BLAST of CsGy4G025815 vs. NCBI nr
Match:
XP_022940822.1 (uncharacterized protein LOC111446301 [Cucurbita moschata])
HSP 1 Score: 157 bits (397), Expect = 1.29e-46
Identity = 86/136 (63.24%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVS--DNEEHGESKGRRRRK--- 60
MSVS Q+L L L+KK KK +RE L+RE G++S ++E+ G+ KGRRR K
Sbjct: 1 MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60
Query: 61 -RRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDP 120
RRK QFG R VL N WYFTSTIS+ILRKAKAFYNECCCDA+EDERMK+ EV +DP
Sbjct: 61 RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120
Query: 121 YFSMPVLPYTTMANCM 130
YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136
BLAST of CsGy4G025815 vs. ExPASy TrEMBL
Match:
A0A0A0L609 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1)
HSP 1 Score: 262 bits (669), Expect = 1.83e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60
MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG
Sbjct: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60
Query: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120
QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV
Sbjct: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120
Query: 121 LPYTTMANCM 130
LPYTTMANCM
Sbjct: 121 LPYTTMANCM 130
BLAST of CsGy4G025815 vs. ExPASy TrEMBL
Match:
A0A5D3BSQ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00900 PE=4 SV=1)
HSP 1 Score: 226 bits (576), Expect = 3.52e-74
Identity = 113/130 (86.92%), Postives = 121/130 (93.08%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60
MS+STQLL LGRLEKKG+KRIKRES KRE NGYYSYK+VSDN EHG+SKGRRRR+RRKKG
Sbjct: 1 MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60
Query: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120
QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDA+EDERM + SIDPYFSMPV
Sbjct: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120
Query: 121 LPYTTMANCM 130
LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126
BLAST of CsGy4G025815 vs. ExPASy TrEMBL
Match:
A0A5A7UDK1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001040 PE=4 SV=1)
HSP 1 Score: 225 bits (573), Expect = 1.01e-73
Identity = 112/130 (86.15%), Postives = 121/130 (93.08%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60
MS+STQLL LGRLEKKG+K+IKRES KRE NGYYSYK+VSDN EHG+SKGRRRR+RRKKG
Sbjct: 1 MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60
Query: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120
QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDA+EDERM + SIDPYFSMPV
Sbjct: 61 QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120
Query: 121 LPYTTMANCM 130
LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126
BLAST of CsGy4G025815 vs. ExPASy TrEMBL
Match:
A0A6J1FKP2 (uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC111446301 PE=4 SV=1)
HSP 1 Score: 157 bits (397), Expect = 6.26e-47
Identity = 86/136 (63.24%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 1 MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVS--DNEEHGESKGRRRRK--- 60
MSVS Q+L L L+KK KK +RE L+RE G++S ++E+ G+ KGRRR K
Sbjct: 1 MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60
Query: 61 -RRKKGQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDP 120
RRK QFG R VL N WYFTSTIS+ILRKAKAFYNECCCDA+EDERMK+ EV +DP
Sbjct: 61 RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120
Query: 121 YFSMPVLPYTTMANCM 130
YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136
BLAST of CsGy4G025815 vs. ExPASy TrEMBL
Match:
A0A1Q3D8H6 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32173 PE=4 SV=1)
HSP 1 Score: 82.4 bits (202), Expect = 1.33e-17
Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0
Query: 43 EEHGESKGRRRRKRRKK-GQFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFED 102
EEH E+ G + R+KK G + + WY TS+IS+ILRKAKAFYNECCCDAFED
Sbjct: 31 EEHEENMGEKYMPRKKKPGHWAL--QFPRLGIWYMTSSISYILRKAKAFYNECCCDAFED 90
Query: 103 ERMKKNEVISIDPYFSMPVLPYTTMANCM 130
+ +V +D YFS PV+P T++ M
Sbjct: 91 PVLMGKQVTLVDSYFSTPVVPPPTISPYM 117
BLAST of CsGy4G025815 vs. TAIR 10
Match:
AT4G19430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 59.3 bits (142), Expect = 2.7e-09
Identity = 31/86 (36.05%), Postives = 50/86 (58.14%), Query Frame = 0
Query: 37 KDVSDNEEHGESKGRRRRKRRKKGQFGTTRDVLHMN-FWYFTSTISHILRKAKAFYNECC 96
++ ++ +EHG+ + + RDV ++ WY +ISHILRKA+AFYNE C
Sbjct: 78 EEETNQQEHGKVSNKDGKSITATKYGDLRRDVARLSLLWYMKCSISHILRKARAFYNEFC 137
Query: 97 CDAFEDERMKKNEVISIDPYFSMPVL 122
CD + + N + ++PYFS+PV+
Sbjct: 138 CDTYAE----SNTMAVVEPYFSIPVI 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KGN55571.1 | 3.78e-88 | 100.00 | hypothetical protein Csa_012627 [Cucumis sativus] | [more] |
TYK01842.1 | 7.27e-74 | 86.92 | hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa] | [more] |
KAA0052276.1 | 2.08e-73 | 86.15 | hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa] | [more] |
KAG6608012.1 | 4.52e-47 | 63.24 | hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022940822.1 | 1.29e-46 | 63.24 | uncharacterized protein LOC111446301 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L609 | 1.83e-88 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1 | [more] |
A0A5D3BSQ8 | 3.52e-74 | 86.92 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UDK1 | 1.01e-73 | 86.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1FKP2 | 6.26e-47 | 63.24 | uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC1114463... | [more] |
A0A1Q3D8H6 | 1.33e-17 | 49.44 | Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... | [more] |
Match Name | E-value | Identity | Description | |
AT4G19430.1 | 2.7e-09 | 36.05 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |