CsGy4G024885 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G024885
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDNA ligase
LocationGy14Chr4: 30486091 .. 30487460 (-)
RNA-Seq ExpressionCsGy4G024885
SyntenyCsGy4G024885
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCCCAATAATTCTCTATAAATATCTCTTCTATTTCTCTCCCCCATTTCCATCATCACTGCTTAACTCTCACCTCTCATCCATTTTTCATTACAAAACTTCCCATCTTCGTCACCATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGAAACCATGGGGTTGGGGATCTTCAGGGAGTCTCTACCCATTGATTCTAACTGTAATTTGCAATTTGCTAAAGGTGTTATTCGTAGAGCTAAATGTATAGATATCTAAAAAGCTCTCTAATTAATTATTAATTGTATATTCCTTCTATTGTTATTACTAATTTACTGATTATGTTTGCTTCTAATTTCGTTTAATTTCAATCAACCTTAGATTTAGTTAAATTACTGTTATGTGTACTGATTATTGTTGGTTATGATGAACTAAAAGATTTGGAAAAAGAGGACTAATCAATGCAGTAGTCATATAACTGAATTAAACCTCTTTAATTGATGAATTTGATAATGTTAATAAATATGTACAAACTATTAGTTTCTTCATTTTTCCACCAAATTCACAAAATCCAAACTTTTACAACTAATCAATATTTGTTCAAAAAAGTTTACAAACACTTAGAAAGTGCTCATATAGTGGATTATTAACTTAATCATTGTTATTAATACAGTTGAACATAAACTCTAAACTTTAATTTTTTTGTTTAGTAGGTTGATGAATTTCGGAAGAGGGAGTCGTGCATGTCGAAGTAGATAAAAAAGAAAGAGAAAGAGAGAACGAGGGGTATGAGAAAGTAAATAAAGAGAAAAAAAACTACATGCATTGTTGATATGCATAGGAGGCAATCAACGAGTGACAACTATTGATATATGTTGAATACATATATACATTTAGGAGGCAATGTTTGCCAAGCTTCCTTGTCCCCATGTCCTAAGTTCTTGCAATAGTTCATCGTCCATTTTGTTATTTTAAAAGAAAAAAAAGACCTATTAATTTACATAAATTATTTATAAATTTTAAATTAATGAATTAGTTTTCACTAAAAAAATTCATCAAAATGACT

mRNA sequence

TTCTCCCAATAATTCTCTATAAATATCTCTTCTATTTCTCTCCCCCATTTCCATCATCACTGCTTAACTCTCACCTCTCATCCATTTTTCATTACAAAACTTCCCATCTTCGTCACCATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGAAACCATGGGGTTGGGGATCTTCAGGGAGTCTCTACCCATTGATTCTAACTGTAATTTGCAATTTGCTAAAGGTGTTATTCGTAGAGCTAAATGTATAGATATCTAAAAAGCTCTCTAATTAATTATTAATTGTATATTCCTTCTATTGTTATTACTAATTTACTGATTATGTTTGCTTCTAATTTCGTTTAATTTCAATCAACCTTAGATTTAGTTAAATTACTGTTATGTGTACTGATTATTGTTGGTTATGATGAACTAAAAGATTTGGAAAAAGAGGACTAATCAATGCAGTAGTCATATAACTGAATTAAACCTCTTTAATTGATGAATTTGATAATGTTAATAAATATGTACAAACTATTAGTTTCTTCATTTTTCCACCAAATTCACAAAATCCAAACTTTTACAACTAATCAATATTTGTTCAAAAAAGTTTACAAACACTTAGAAAGTGCTCATATAGTGGATTATTAACTTAATCATTGTTATTAATACAGTTGAACATAAACTCTAAACTTTAATTTTTTTGTTTAGTAGGTTGATGAATTTCGGAAGAGGGAGTCGTGCATGTCGAAGTAGATAAAAAAGAAAGAGAAAGAGAGAACGAGGGGTATGAGAAAGTAAATAAAGAGAAAAAAAACTACATGCATTGTTGATATGCATAGGAGGCAATCAACGAGTGACAACTATTGATATATGTTGAATACATATATACATTTAGGAGGCAATGTTTGCCAAGCTTCCTTGTCCCCATGTCCTAAGTTCTTGCAATAGTTCATCGTCCATTTTGTTATTTTAAAAGAAAAAAAAGACCTATTAATTTACATAAATTATTTATAAATTTTAAATTAATGAATTAGTTTTCACTAAAAAAATTCATCAAAATGACT

Coding sequence (CDS)

ATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGA

Protein sequence

MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF*
Homology
BLAST of CsGy4G024885 vs. NCBI nr
Match: KGN55462.1 (hypothetical protein Csa_012581 [Cucumis sativus])

HSP 1 Score: 258 bits (659), Expect = 5.56e-87
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVA 60
           MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVA
Sbjct: 1   MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVA 60

Query: 61  RISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF 119
           RISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF
Sbjct: 61  RISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF 119

BLAST of CsGy4G024885 vs. NCBI nr
Match: XP_008452891.1 (PREDICTED: uncharacterized protein LOC103493778 [Cucumis melo] >KAA0064610.1 DNA ligase [Cucumis melo var. makuwa] >TYK19982.1 DNA ligase [Cucumis melo var. makuwa])

HSP 1 Score: 212 bits (539), Expect = 1.13e-68
Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPI-SCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLV 60
           MFNHYNPFSFTHKLKS I SCFRPDHD ELH+N     +PALKSMTSDLPELRGMCRSLV
Sbjct: 1   MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDD--NPALKSMTSDLPELRGMCRSLV 60

Query: 61  ARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPH-VNLMR 119
           ARISWPSRRRYHHS DFRYDPSSYALNFEDEQ+R D+EFPIRDFTSRLPASPP  VNLMR
Sbjct: 61  ARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIRDFTSRLPASPPPPVNLMR 119

BLAST of CsGy4G024885 vs. NCBI nr
Match: XP_023523424.1 (uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160 bits (405), Expect = 3.39e-48
Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPISCFRPDHDPELHD----NPSSPTSPALKSMTSDLPELRGMCR 60
           M N Y+PFSFT KLKS I CFR DH   L +    +P +P SP LKSM ++ PELRGMCR
Sbjct: 1   MLNDYHPFSFTRKLKSSILCFRRDHGDFLENEDDSSPRTPRSP-LKSMAAEFPELRGMCR 60

Query: 61  SLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPP 112
           +LVARI   SRRRYHHS DFRYDPSSYALNFEDEQ+R DDEFPIRDF SRLPASPP
Sbjct: 61  NLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEFPIRDFASRLPASPP 114

BLAST of CsGy4G024885 vs. NCBI nr
Match: KAG7031776.1 (hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160 bits (405), Expect = 3.39e-48
Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPISCFRPDHDPELHD----NPSSPTSPALKSMTSDLPELRGMCR 60
           M N Y+PFSFT KLKS I CFR DH   L +    +P +P SP LKSM ++ PELRGMCR
Sbjct: 1   MLNDYHPFSFTRKLKSSILCFRRDHGDFLENEGDSSPRTPRSP-LKSMAAEFPELRGMCR 60

Query: 61  SLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPP 112
           +LVARI   SRRRYHHS DFRYDPSSYALNFEDEQ+R DDEFPIRDF SRLPASPP
Sbjct: 61  NLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEFPIRDFASRLPASPP 114

BLAST of CsGy4G024885 vs. NCBI nr
Match: XP_022940408.1 (uncharacterized protein LOC111446022 [Cucurbita moschata] >KAG6608139.1 hypothetical protein SDJN03_01481, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160 bits (405), Expect = 3.50e-48
Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPISCFRPDHDPELHD----NPSSPTSPALKSMTSDLPELRGMCR 60
           M N Y+PFSFT KLKS I CFR DH   L +    +P +P SP LKSM ++ PELRGMCR
Sbjct: 2   MLNDYHPFSFTRKLKSSILCFRRDHGDFLENEGDSSPRTPRSP-LKSMAAEFPELRGMCR 61

Query: 61  SLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPP 112
           +LVARI   SRRRYHHS DFRYDPSSYALNFEDEQ+R DDEFPIRDF SRLPASPP
Sbjct: 62  NLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEFPIRDFASRLPASPP 115

BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A0A0L4E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652740 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 2.69e-87
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVA 60
           MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVA
Sbjct: 1   MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVA 60

Query: 61  RISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF 119
           RISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF
Sbjct: 61  RISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF 119

BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A5A7VBS3 (DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00970 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 5.45e-69
Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPI-SCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLV 60
           MFNHYNPFSFTHKLKS I SCFRPDHD ELH+N     +PALKSMTSDLPELRGMCRSLV
Sbjct: 1   MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDD--NPALKSMTSDLPELRGMCRSLV 60

Query: 61  ARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPH-VNLMR 119
           ARISWPSRRRYHHS DFRYDPSSYALNFEDEQ+R D+EFPIRDFTSRLPASPP  VNLMR
Sbjct: 61  ARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIRDFTSRLPASPPPPVNLMR 119

BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A1S3BVQ9 (uncharacterized protein LOC103493778 OS=Cucumis melo OX=3656 GN=LOC103493778 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 5.45e-69
Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPI-SCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLV 60
           MFNHYNPFSFTHKLKS I SCFRPDHD ELH+N     +PALKSMTSDLPELRGMCRSLV
Sbjct: 1   MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDD--NPALKSMTSDLPELRGMCRSLV 60

Query: 61  ARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPH-VNLMR 119
           ARISWPSRRRYHHS DFRYDPSSYALNFEDEQ+R D+EFPIRDFTSRLPASPP  VNLMR
Sbjct: 61  ARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIRDFTSRLPASPPPPVNLMR 119

BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A6J1FP70 (uncharacterized protein LOC111446022 OS=Cucurbita moschata OX=3662 GN=LOC111446022 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 1.69e-48
Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPISCFRPDHDPELHD----NPSSPTSPALKSMTSDLPELRGMCR 60
           M N Y+PFSFT KLKS I CFR DH   L +    +P +P SP LKSM ++ PELRGMCR
Sbjct: 2   MLNDYHPFSFTRKLKSSILCFRRDHGDFLENEGDSSPRTPRSP-LKSMAAEFPELRGMCR 61

Query: 61  SLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPP 112
           +LVARI   SRRRYHHS DFRYDPSSYALNFEDEQ+R DDEFPIRDF SRLPASPP
Sbjct: 62  NLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEFPIRDFASRLPASPP 115

BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A6J1J1H3 (uncharacterized protein LOC111480417 OS=Cucurbita maxima OX=3661 GN=LOC111480417 PE=4 SV=1)

HSP 1 Score: 159 bits (401), Expect = 6.88e-48
Identity = 81/116 (69.83%), Postives = 90/116 (77.59%), Query Frame = 0

Query: 1   MFNHYNPFSFTHKLKSPISCFRPDH----DPELHDNPSSPTSPALKSMTSDLPELRGMCR 60
           M N Y+PFSFT KLKS I CFR DH    + E   +P +P SP LKSM ++ PE+RGMCR
Sbjct: 2   MLNEYHPFSFTRKLKSSIRCFRRDHSDFFESEDDSSPRTPRSP-LKSMAAEFPEIRGMCR 61

Query: 61  SLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPP 112
           +LVARI    RRRYHHS DFRYDPSSYALNFEDEQ+R DDEFPIRDF SRLPASPP
Sbjct: 62  NLVARIG-RCRRRYHHSADFRYDPSSYALNFEDEQVRDDDEFPIRDFASRLPASPP 115

BLAST of CsGy4G024885 vs. TAIR 10
Match: AT5G11070.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10
Identity = 48/121 (39.67%), Postives = 63/121 (52.07%), Query Frame = 0

Query: 12  HKLKSPISCFRPDH--DPE---LHDNPSSPTSPA--LKSMTSDLPELRGMCRSLVARISW 71
           H+++SPI C   +   +PE   +     +P SP   LKS   +L ELR  CR + +RI  
Sbjct: 20  HRMRSPICCIGANAVVEPEAMMIGGEQRTPRSPYEWLKSTAQEL-ELRDRCRRVKSRIKV 79

Query: 72  PSR----------RRYHHST----DFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPAS 112
             R            +HHS     DF YDP SYALNFED  +R DD+    +FT+RLP S
Sbjct: 80  TCRNNNCAYNNCVHHHHHSQSYPGDFSYDPLSYALNFED-NVRADDDGSFPNFTARLPQS 138

BLAST of CsGy4G024885 vs. TAIR 10
Match: AT5G35090.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-09
Identity = 49/136 (36.03%), Postives = 64/136 (47.06%), Query Frame = 0

Query: 9   SFTHKLKSPI---SCFRP----DHDPELHDNPSSP--TSPALKS------------MTSD 68
           S   KLKS      CFR      HD    D PSSP  T  + +S            +T  
Sbjct: 10  SLQKKLKSRFCIAGCFRTTNHHHHDNIPDDLPSSPVTTEKSTQSPHGGGMKTKSPRLTRT 69

Query: 69  LPELRGMCRSLVAR-------ISWPSRRRYHHSTDFRYDPSSYALNF----EDEQLRYDD 113
           L +    C+SL+ R       +    +    H+ DF YDPSSYALNF    ED+ +   D
Sbjct: 70  LSKSHEKCKSLIHRMGGGVGGVGGHGKHIRRHTADFHYDPSSYALNFDKGDEDDNI---D 129

BLAST of CsGy4G024885 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 6.9e-04
Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0

Query: 76  FRYDPSSYALNFED--EQLRYDDEFPIRDFTSRLPA 110
           FRYD  SY+LNF+D  +   +DDEFP RD++ R  A
Sbjct: 125 FRYDQLSYSLNFDDGNQTGHFDDEFPYRDYSMRFAA 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN55462.15.56e-87100.00hypothetical protein Csa_012581 [Cucumis sativus][more]
XP_008452891.11.13e-6886.78PREDICTED: uncharacterized protein LOC103493778 [Cucumis melo] >KAA0064610.1 DNA... [more]
XP_023523424.13.39e-4871.55uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo][more]
KAG7031776.13.39e-4871.55hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022940408.13.50e-4871.55uncharacterized protein LOC111446022 [Cucurbita moschata] >KAG6608139.1 hypothet... [more]
Match NameE-valueIdentityDescription
A0A0A0L4E22.69e-87100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652740 PE=4 SV=1[more]
A0A5A7VBS35.45e-6986.78DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00970 PE=... [more]
A0A1S3BVQ95.45e-6986.78uncharacterized protein LOC103493778 OS=Cucumis melo OX=3656 GN=LOC103493778 PE=... [more]
A0A6J1FP701.69e-4871.55uncharacterized protein LOC111446022 OS=Cucurbita moschata OX=3662 GN=LOC1114460... [more]
A0A6J1J1H36.88e-4869.83uncharacterized protein LOC111480417 OS=Cucurbita maxima OX=3661 GN=LOC111480417... [more]
Match NameE-valueIdentityDescription
AT5G11070.12.9e-1039.67unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
AT5G35090.13.2e-0936.03unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
AT3G01430.16.9e-0452.78BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..46
NoneNo IPR availablePANTHERPTHR33168:SF61SUBFAMILY NOT NAMEDcoord: 11..113
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 11..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G024885.1CsGy4G024885.1mRNA