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CsGy4G024885 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTCCCAATAATTCTCTATAAATATCTCTTCTATTTCTCTCCCCCATTTCCATCATCACTGCTTAACTCTCACCTCTCATCCATTTTTCATTACAAAACTTCCCATCTTCGTCACCATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGAAACCATGGGGTTGGGGATCTTCAGGGAGTCTCTACCCATTGATTCTAACTGTAATTTGCAATTTGCTAAAGGTGTTATTCGTAGAGCTAAATGTATAGATATCTAAAAAGCTCTCTAATTAATTATTAATTGTATATTCCTTCTATTGTTATTACTAATTTACTGATTATGTTTGCTTCTAATTTCGTTTAATTTCAATCAACCTTAGATTTAGTTAAATTACTGTTATGTGTACTGATTATTGTTGGTTATGATGAACTAAAAGATTTGGAAAAAGAGGACTAATCAATGCAGTAGTCATATAACTGAATTAAACCTCTTTAATTGATGAATTTGATAATGTTAATAAATATGTACAAACTATTAGTTTCTTCATTTTTCCACCAAATTCACAAAATCCAAACTTTTACAACTAATCAATATTTGTTCAAAAAAGTTTACAAACACTTAGAAAGTGCTCATATAGTGGATTATTAACTTAATCATTGTTATTAATACAGTTGAACATAAACTCTAAACTTTAATTTTTTTGTTTAGTAGGTTGATGAATTTCGGAAGAGGGAGTCGTGCATGTCGAAGTAGATAAAAAAGAAAGAGAAAGAGAGAACGAGGGGTATGAGAAAGTAAATAAAGAGAAAAAAAACTACATGCATTGTTGATATGCATAGGAGGCAATCAACGAGTGACAACTATTGATATATGTTGAATACATATATACATTTAGGAGGCAATGTTTGCCAAGCTTCCTTGTCCCCATGTCCTAAGTTCTTGCAATAGTTCATCGTCCATTTTGTTATTTTAAAAGAAAAAAAAGACCTATTAATTTACATAAATTATTTATAAATTTTAAATTAATGAATTAGTTTTCACTAAAAAAATTCATCAAAATGACT TTCTCCCAATAATTCTCTATAAATATCTCTTCTATTTCTCTCCCCCATTTCCATCATCACTGCTTAACTCTCACCTCTCATCCATTTTTCATTACAAAACTTCCCATCTTCGTCACCATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGAAACCATGGGGTTGGGGATCTTCAGGGAGTCTCTACCCATTGATTCTAACTGTAATTTGCAATTTGCTAAAGGTGTTATTCGTAGAGCTAAATGTATAGATATCTAAAAAGCTCTCTAATTAATTATTAATTGTATATTCCTTCTATTGTTATTACTAATTTACTGATTATGTTTGCTTCTAATTTCGTTTAATTTCAATCAACCTTAGATTTAGTTAAATTACTGTTATGTGTACTGATTATTGTTGGTTATGATGAACTAAAAGATTTGGAAAAAGAGGACTAATCAATGCAGTAGTCATATAACTGAATTAAACCTCTTTAATTGATGAATTTGATAATGTTAATAAATATGTACAAACTATTAGTTTCTTCATTTTTCCACCAAATTCACAAAATCCAAACTTTTACAACTAATCAATATTTGTTCAAAAAAGTTTACAAACACTTAGAAAGTGCTCATATAGTGGATTATTAACTTAATCATTGTTATTAATACAGTTGAACATAAACTCTAAACTTTAATTTTTTTGTTTAGTAGGTTGATGAATTTCGGAAGAGGGAGTCGTGCATGTCGAAGTAGATAAAAAAGAAAGAGAAAGAGAGAACGAGGGGTATGAGAAAGTAAATAAAGAGAAAAAAAACTACATGCATTGTTGATATGCATAGGAGGCAATCAACGAGTGACAACTATTGATATATGTTGAATACATATATACATTTAGGAGGCAATGTTTGCCAAGCTTCCTTGTCCCCATGTCCTAAGTTCTTGCAATAGTTCATCGTCCATTTTGTTATTTTAAAAGAAAAAAAAGACCTATTAATTTACATAAATTATTTATAAATTTTAAATTAATGAATTAGTTTTCACTAAAAAAATTCATCAAAATGACT ATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGA MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF* Homology
BLAST of CsGy4G024885 vs. NCBI nr
Match: KGN55462.1 (hypothetical protein Csa_012581 [Cucumis sativus]) HSP 1 Score: 258 bits (659), Expect = 5.56e-87 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsGy4G024885 vs. NCBI nr
Match: XP_008452891.1 (PREDICTED: uncharacterized protein LOC103493778 [Cucumis melo] >KAA0064610.1 DNA ligase [Cucumis melo var. makuwa] >TYK19982.1 DNA ligase [Cucumis melo var. makuwa]) HSP 1 Score: 212 bits (539), Expect = 1.13e-68 Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of CsGy4G024885 vs. NCBI nr
Match: XP_023523424.1 (uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 160 bits (405), Expect = 3.39e-48 Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of CsGy4G024885 vs. NCBI nr
Match: KAG7031776.1 (hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 160 bits (405), Expect = 3.39e-48 Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of CsGy4G024885 vs. NCBI nr
Match: XP_022940408.1 (uncharacterized protein LOC111446022 [Cucurbita moschata] >KAG6608139.1 hypothetical protein SDJN03_01481, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 160 bits (405), Expect = 3.50e-48 Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A0A0L4E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652740 PE=4 SV=1) HSP 1 Score: 258 bits (659), Expect = 2.69e-87 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A5A7VBS3 (DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00970 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 5.45e-69 Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A1S3BVQ9 (uncharacterized protein LOC103493778 OS=Cucumis melo OX=3656 GN=LOC103493778 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 5.45e-69 Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A6J1FP70 (uncharacterized protein LOC111446022 OS=Cucurbita moschata OX=3662 GN=LOC111446022 PE=4 SV=1) HSP 1 Score: 160 bits (405), Expect = 1.69e-48 Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of CsGy4G024885 vs. ExPASy TrEMBL
Match: A0A6J1J1H3 (uncharacterized protein LOC111480417 OS=Cucurbita maxima OX=3661 GN=LOC111480417 PE=4 SV=1) HSP 1 Score: 159 bits (401), Expect = 6.88e-48 Identity = 81/116 (69.83%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of CsGy4G024885 vs. TAIR 10
Match: AT5G11070.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10 Identity = 48/121 (39.67%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of CsGy4G024885 vs. TAIR 10
Match: AT5G35090.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 3.2e-09 Identity = 49/136 (36.03%), Postives = 64/136 (47.06%), Query Frame = 0
BLAST of CsGy4G024885 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 6.9e-04 Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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