CsGy4G024410 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G024410
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionER membrane protein complex subunit 4
LocationGy14Chr4: 30173004 .. 30176345 (+)
RNA-Seq ExpressionCsGy4G024410
SyntenyCsGy4G024410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTAGTTTTGGTATTGGAAATTAAAAGAGATATTAATCTGGTTGAAATTTTCGGACCATAAACCTTCAAAAGGATCTGAATCTAAGCGTCTAAGTGAATCAACTCCAAACTCCACCATCGGAAAATCAGGAACCCCGTAATCTGAATGGAAAAGGGCAAGGGTTTGATGGTGGACAGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCGTCGAATTCAACTCGCGATATTCCTGATCCACCCGGTTTCACTCGTGCTTCTCAAGATCAAGACGATTCCACTCTCAGTCGCCAGAAGAAGGATGCCGAATCCAATTGGAAGGCTCAGGTGCTAGTCGAAATTGTATTATTTTGGTCGATTAGGGTTTCTTTTGAGATTCTTCGTCCTTAATTTTTCACGCATCTCGATGGGTTTTAGTTCTAGCGAAATTTAGAGCTTAGCAATAATCAATTATCTTTTTAGGGGAGGAGTTGATAAGATTACTTAGTAGTAGAAGCTTTGTTCTTCATTTTATGTGGGATTTTTAAAAAAAGTAAATATGGTAGACAAGAATTTTGTTGCCAAATGCAGTGATCTAACTTTGCAATATATGAGCAGAAAGCTTGGGAAGTGGCCCAGGCGCCGTTGAAGAATTTGTTCATGATGGGATTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGCATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCCCTGCAAGGCGTTGGAAAGGGTAGGATTGATATCCATTCTCTTTGCTAACTTCATCTTTTTCGTTATGTGTGTGTGTTTTGTTTAGCATGGTGTTGTCTTATCTCTATCGTTCTGTCTATAAGCACATTTGACCAAGTAAGGTTGTAACTAGGTAGTGTTTTTTCAATAGCTTCCTTTTCTAGTGGATTTCTAATAAGTAGAACTAAATATCGATTGCTCTGTTTGTAGAATGGCTATATAAGATATAAAATTTTGAACTATGTAAGGAAAAATTATATTGTTTCTGGGATCAGGGATGTTAGTGATTTGATTTTAGTAGGTTTATCATATTGTTGGCTGTTTGTATTGATATTTCTTTTTCCTGCAGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTCTTTATTGCTCTCAACCTCGGAGGTTTAGCATTAGGTGTTTGGAAGGTGAGTTTTCTAATATTATAAATCTTTTTTTTAATCTCTTAATCTCTAAACAAGTTCTGAACGCCTCTTTTGTATTTTCTTACCACTGCTTAATTTTCCTACATTTCAAATGTGGCTTTTGCAGCTTAACACTTTGGGGCTTCTGCCAACACATATATCAGACTGGGTTTCGTCACTACCACCTGCTCAGGTCAGTTTCTTACTCATATGTTAATATGATTACTCCCTTTCATGGGCATCTGCTGTTATGGCAACTCATGGGCTCCATGTTTCAATAACTTGTGGTTCTACTTCTAAATGCTGTCATGTTAATCAAATACAGTGTTAGGATGCAAGTTCCTCATGCTTTCACTTCAGTTAGGATGCAAGTTCTTTTGTTAATAATCAAGAAAAAATATTTTTAAATTGGTCCGGTTGATTGGATTTCTAGGCCATCTGTTTGGTTTACTCTTTCAAGTAGAGTTGAATCGTTTCTAATGTGGACTGAGTTTTGATTTTTAATGGTTGACTGCTGGAAGGTTAGTTGTTTGTAGTTAGCTTGATTGCAGGCTGTTAATTAGTTAAGTTGCTTGGATAGGAGAAAATAGAAGGGGGAAGAATAAGGTATGAGTGAAAGCAATGGGTTAATAGAGTATCACCTCGACCAAAAGGTCAGAGGTTCAAACCTCACTCCTTGAATTTTGAACTCAAAATAAGGGATGAGAGAAGTAATGAGAAAAATATACTTCTTCATACTTCTCTATCCTTTGATTATGATTAACTGTAGCTTTTAAATTCGGATTGAAGTCACTTAACATTTGATAGGATCTACAGGGTTAGTTTTATTTAAACTTTGTTTCAATCGGATCAGAGATCTTCTCTATTATCATTTATAGTTATTCTGATTGTTTATCAAATTTTAACATGCAATTAAATGCTCCCATCTCATAATCCCGACAAAAAATTCACTAGTCGATCTTCGCATTGAATTGAAATGCCACTTGAGATGTGCTTGGTTAACAAGAAGAATAGTAACTTGTTGTGCCTATTAATTTTTTAAACTTTTGGTTAGTGCTAGCACCTTGGAACTTATTCTTTATGATAATAGTCCTTCCATTCTCTGTACCATTGTTAAATATTTATCATCTTTTTTCTCAGGAGGTCGAATTTTCTGGTGGTGGGATTTCTCTTCGCTAAGATGCACAACATCATTTCATCTGCTAACGACAGTGAAACCAACAGAGAATCATAGAGCCACTTGTTGAGGATCGAACTTCATGGATGGATTGCTCGTGTTGTGCATGAACGTGATTATAAGTCTCTATATTATGCCTGCATGGATTGTGCTTGATCAAGAACAGTGTTAGAGATGTGCTGAGGGCACAGCTATTGTTTATGATACTCAGTTTTCTTTAAAAGATTAGATCCTGCTAGTAAAAAATATTACTGACTGGTAAAACCATCCCATAGTTTGCTAATTCCTTGCTCTGTATGCCCAAGAACAAAATGCTTTACATGGAATATGGTTTAACATTTTTTTTAATTCTCTTTTGCATTATTTTTTAACAAATAAATCCCTGGAAAGTGATGGTAGTCAAATGCATGTCAATATGGGAAGAATGATTATGATCGTTTTCTTTTCCTTTCTATGTTCTCCAACTTGGAGATCAAAGTACAAACTTTATGCGGGTTGAATTATGATTCATGTGGTGTTAGAAGGTCTTACGCTTTCCAGTTGGAGCACTTGAAGTTACCTTCTGATAGTGAGCTGCTTGTTGATGTCAATCGAGTGATGGACCTGTTTTTGTATGTTAGGTGTTTTATTGACGATATCTAGAATTTTTCTTTCATTTCTGTTAATTTTTGCTTCGTTTGTTGTGATTGGAATTGAACCTCTTATATACACTAGCTGGTAGGGATGGTTCGGGTATCTCTTTAACGTGGTGTTGTGATTTTCTTGATTAGTTATTTTCCTCTCGTAGGTTGGATATTCGTCTATTCTTCTCTGCCAAGTTTGGCAAGTTTCTGAGTTAATTAAGTTTTGTTTCTCCAGGGGATGCTAAATAGAGACTAAAAAGCAGGGTTTGGAAGTACTTAATAGTTTAAATTTATAATTTAAGTTATATATATATGGTCTTCAAATAAAAATAGTAAGTTGCAAC

mRNA sequence

CTTAGTTTTGGTATTGGAAATTAAAAGAGATATTAATCTGGTTGAAATTTTCGGACCATAAACCTTCAAAAGGATCTGAATCTAAGCGTCTAAGTGAATCAACTCCAAACTCCACCATCGGAAAATCAGGAACCCCGTAATCTGAATGGAAAAGGGCAAGGGTTTGATGGTGGACAGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCGTCGAATTCAACTCGCGATATTCCTGATCCACCCGGTTTCACTCGTGCTTCTCAAGATCAAGACGATTCCACTCTCAGTCGCCAGAAGAAGGATGCCGAATCCAATTGGAAGGCTCAGAAAGCTTGGGAAGTGGCCCAGGCGCCGTTGAAGAATTTGTTCATGATGGGATTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGCATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCCCTGCAAGGCGTTGGAAAGGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTCTTTATTGCTCTCAACCTCGGAGGTTTAGCATTAGGTGTTTGGAAGCTTAACACTTTGGGGCTTCTGCCAACACATATATCAGACTGGGTTTCGTCACTACCACCTGCTCAGGAGGTCGAATTTTCTGGTGGTGGGATTTCTCTTCGCTAAGATGCACAACATCATTTCATCTGCTAACGACAGTGAAACCAACAGAGAATCATAGAGCCACTTGTTGAGGATCGAACTTCATGGATGGATTGCTCGTGTTGTGCATGAACGTGATTATAAGTCTCTATATTATGCCTGCATGGATTGTGCTTGATCAAGAACAGTGTTAGAGATGTGCTGAGGGCACAGCTATTGTTTATGATACTCAGTTTTCTTTAAAAGATTAGATCCTGCTAGTAAAAAATATTACTGACTGGTAAAACCATCCCATAGTTTGCTAATTCCTTGCTCTGTATGCCCAAGAACAAAATGCTTTACATGGAATATGGTTTAACATTTTTTTTAATTCTCTTTTGCATTATTTTTTAACAAATAAATCCCTGGAAAGTGATGGTAGTCAAATGCATGTCAATATGGGAAGAATGATTATGATCGTTTTCTTTTCCTTTCTATGTTCTCCAACTTGGAGATCAAAGTACAAACTTTATGCGGGTTGAATTATGATTCATGTGGTGTTAGAAGGTCTTACGCTTTCCAGTTGGAGCACTTGAAGTTACCTTCTGATAGTGAGCTGCTTGTTGATGTCAATCGAGTGATGGACCTGTTTTTGTATGTTAGGTGTTTTATTGACGATATCTAGAATTTTTCTTTCATTTCTGTTAATTTTTGCTTCGTTTGTTGTGATTGGAATTGAACCTCTTATATACACTAGCTGGTAGGGATGGTTCGGGTATCTCTTTAACGTGGTGTTGTGATTTTCTTGATTAGTTATTTTCCTCTCGTAGGTTGGATATTCGTCTATTCTTCTCTGCCAAGTTTGGCAAGTTTCTGAGTTAATTAAGTTTTGTTTCTCCAGGGGATGCTAAATAGAGACTAAAAAGCAGGGTTTGGAAGTACTTAATAGTTTAAATTTATAATTTAAGTTATATATATATGGTCTTCAAATAAAAATAGTAAGTTGCAAC

Coding sequence (CDS)

ATGGAAAAGGGCAAGGGTTTGATGGTGGACAGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCGTCGAATTCAACTCGCGATATTCCTGATCCACCCGGTTTCACTCGTGCTTCTCAAGATCAAGACGATTCCACTCTCAGTCGCCAGAAGAAGGATGCCGAATCCAATTGGAAGGCTCAGAAAGCTTGGGAAGTGGCCCAGGCGCCGTTGAAGAATTTGTTCATGATGGGATTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGCATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCCCTGCAAGGCGTTGGAAAGGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTCTTTATTGCTCTCAACCTCGGAGGTTTAGCATTAGGTGTTTGGAAGCTTAACACTTTGGGGCTTCTGCCAACACATATATCAGACTGGGTTTCGTCACTACCACCTGCTCAGGAGGTCGAATTTTCTGGTGGTGGGATTTCTCTTCGCTAA

Protein sequence

MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR*
Homology
[Close]
BLAST of CsGy4G024410 vs. ExPASy Swiss-Prot
Match: Q3T0K8 (ER membrane protein complex subunit 4 OS=Bos taurus OX=9913 GN=EMC4 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 0 

Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]
BLAST of CsGy4G024410 vs. ExPASy Swiss-Prot
Match: Q5J8M3 (ER membrane protein complex subunit 4 OS=Homo sapiens OX=9606 GN=EMC4 PE=1 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 0 

Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]
BLAST of CsGy4G024410 vs. ExPASy Swiss-Prot
Match: Q9CZX9 (ER membrane protein complex subunit 4 OS=Mus musculus OX=10090 GN=Emc4 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 0 

Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]
BLAST of CsGy4G024410 vs. ExPASy Swiss-Prot
Match: Q5RC35 (ER membrane protein complex subunit 4 OS=Pongo abelii OX=9601 GN=EMC4 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 0 

Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]
BLAST of CsGy4G024410 vs. ExPASy Swiss-Prot
Match: Q6P011 (ER membrane protein complex subunit 4 OS=Danio rerio OX=7955 GN=emc4 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19
Identity = 60/178 (33.71%), Postives = 95/178 (53.37%), Query Frame = 0 

Query: 6   GLMVDSRRWAVDFS-DNSSSNSTR-----DIPDPPGFTRASQDQDDSTLSRQKKDAESNW 65
           G      +WAV+ S  NS S S R     D+  P G++      D        ++A+ N 
Sbjct: 17  GAATKRMKWAVELSLGNSRSRSDRQGKDGDVMYPVGYS------DKPVPDTSVQEADRNL 76

Query: 66  KAQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 125
             ++ W+VA  PLK + M  F+M+M+G+T+ +F I +     W+PI AL  +   F+  +
Sbjct: 77  VEKRCWDVALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLE 136

Query: 126 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGI 178
            S    L   L+++  NL G AL ++K  ++GLLPTH SDW++ + P Q +E  GGG+
Sbjct: 137 SSSQQWL-QGLVYLIGNLLGSALAIYKCQSMGLLPTHSSDWLAFIEPPQRLEIMGGGM 187

[Close]
BLAST of CsGy4G024410 vs. NCBI nr
Match: XP_004145491.1 (ER membrane protein complex subunit 4 [Cucumis sativus] >KGN55415.1 hypothetical protein Csa_012491 [Cucumis sativus])

HSP 1 Score: 362 bits (928), Expect = 5.19e-126
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of CsGy4G024410 vs. NCBI nr
Match: XP_008452824.1 (PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo])

HSP 1 Score: 360 bits (923), Expect = 3.00e-125
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of CsGy4G024410 vs. NCBI nr
Match: XP_022935895.1 (ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_023535009.1 ER membrane protein complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG6591518.1 ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024405.1 ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356 bits (914), Expect = 7.08e-124
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of CsGy4G024410 vs. NCBI nr
Match: XP_022941437.1 (ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_022982038.1 ER membrane protein complex subunit 4-like [Cucurbita maxima] >XP_023524401.1 ER membrane protein complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG7037662.1 ER membrane protein complex subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353 bits (907), Expect = 8.27e-123
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDF+DNSSSNSTRDIPDPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180

[Close]
BLAST of CsGy4G024410 vs. NCBI nr
Match: XP_038899129.1 (ER membrane protein complex subunit 4 [Benincasa hispida])

HSP 1 Score: 353 bits (906), Expect = 1.17e-122
Identity = 175/180 (97.22%), Postives = 177/180 (98.33%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDFSDNSSS+STRDIPDPPGF+RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSSSTRDIPDPPGFSRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFCLR 180

[Close]
BLAST of CsGy4G024410 vs. ExPASy TrEMBL
Match: A0A0A0L0B6 (ER membrane protein complex subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_4G651820 PE=3 SV=1)

HSP 1 Score: 362 bits (928), Expect = 2.51e-126
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of CsGy4G024410 vs. ExPASy TrEMBL
Match: A0A1S3BUR2 (ER membrane protein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103493734 PE=3 SV=1)

HSP 1 Score: 360 bits (923), Expect = 1.45e-125
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of CsGy4G024410 vs. ExPASy TrEMBL
Match: A0A6J1FBZ1 (ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111442661 PE=3 SV=1)

HSP 1 Score: 356 bits (914), Expect = 3.43e-124
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of CsGy4G024410 vs. ExPASy TrEMBL
Match: A0A6J1J3R8 (ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111481007 PE=3 SV=1)

HSP 1 Score: 353 bits (907), Expect = 4.00e-123
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDF+DNSSSNSTRDIPDPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180

[Close]
BLAST of CsGy4G024410 vs. ExPASy TrEMBL
Match: A0A6J1FMF6 (ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111446731 PE=3 SV=1)

HSP 1 Score: 353 bits (907), Expect = 4.00e-123
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDF+DNSSSNSTRDIPDPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180

[Close]
BLAST of CsGy4G024410 vs. TAIR 10
Match: AT5G10780.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 290.4 bits (742), Expect = 9.8e-79
Identity = 141/176 (80.11%), Postives = 157/176 (89.20%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           M+KGK +M   RRWAV+FSD S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK
Sbjct: 1   MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            QKAWEVAQ+P KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct: 61  LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGG 177
           +KV+LL PKL+F+ALNLGGLALGVWKLNTLGLLPTH SDWVSSLPP QEVE SGGG
Sbjct: 121 NKVELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPPQEVEHSGGG 176

[Close]
BLAST of CsGy4G024410 vs. TAIR 10
Match: AT5G10780.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). )

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-74
Identity = 134/168 (79.76%), Postives = 150/168 (89.29%), Query Frame = 0 

Query: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           M+KGK +M   RRWAV+FSD S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK
Sbjct: 1   MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            QKAWEVAQ+P KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct: 61  LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQ 169
           +KV+LL PKL+F+ALNLGGLALGVWKLNTLGLLPTH SDWVSSLPP Q
Sbjct: 121 NKVELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPPQ 168

The following BLAST results are available for this feature:
BLAST of CsGy4G024410 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3T0K81.3e-1939.83ER membrane protein complex subunit 4 OS=Bos taurus OX=9913 GN=EMC4 PE=2 SV=1[more]
Q5J8M31.3e-1939.83ER membrane protein complex subunit 4 OS=Homo sapiens OX=9606 GN=EMC4 PE=1 SV=2[more]
Q9CZX91.3e-1939.83ER membrane protein complex subunit 4 OS=Mus musculus OX=10090 GN=Emc4 PE=1 SV=1[more]
Q5RC351.3e-1939.83ER membrane protein complex subunit 4 OS=Pongo abelii OX=9601 GN=EMC4 PE=2 SV=1[more]
Q6P0111.7e-1933.71ER membrane protein complex subunit 4 OS=Danio rerio OX=7955 GN=emc4 PE=2 SV=1[more]
BLAST of CsGy4G024410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145491.15.19e-126100.00ER membrane protein complex subunit 4 [Cucumis sativus] >KGN55415.1 hypothetical... [more]
XP_008452824.13.00e-12598.89PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo][more]
XP_022935895.17.08e-12498.33ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_023535009.1 ... [more]
XP_022941437.18.27e-12397.22ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_022982038.1 ... [more]
XP_038899129.11.17e-12297.22ER membrane protein complex subunit 4 [Benincasa hispida][more]
BLAST of CsGy4G024410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0B62.51e-126100.00ER membrane protein complex subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_4G651820... [more]
A0A1S3BUR21.45e-12598.89ER membrane protein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103493734 PE... [more]
A0A6J1FBZ13.43e-12498.33ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111442... [more]
A0A6J1J3R84.00e-12397.22ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC11148100... [more]
A0A6J1FMF64.00e-12397.22ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111446... [more]
BLAST of CsGy4G024410 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G10780.19.8e-7980.11CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transme... [more]
AT5G10780.21.9e-7479.76FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009445TMEM85/ER membrane protein complex subunit 4PFAMPF06417DUF1077coord: 52..164
e-value: 2.2E-38
score: 130.9
IPR009445TMEM85/ER membrane protein complex subunit 4PIRSFPIRSF017207UCP017207_Tmem85coord: 1..178
e-value: 1.6E-53
score: 178.8
IPR009445TMEM85/ER membrane protein complex subunit 4PANTHERPTHR19315ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4coord: 8..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..57

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G024410.1CsGy4G024410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0072546 EMC complex