CsGy4G023890 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G023890
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	17.1 kDa class II heat shock protein-like
Location	Gy14Chr4: 29798059 .. 29798936 (-)
RNA-Seq Expression	CsGy4G023890
Synteny	CsGy4G023890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGAACTCATACGAGGAATGCGACAGAAGCTCCTGGAACCTCCTCCTTCCAACTCTTCTCAACACTTCCAGAAAATTCCTTCTTCACTCACTCATTCACAACGTCTATAAAACCCAACCAACCGTTCGCCATTCGTATCAACGAAAATTAGCTCTTCAATTTGCAAGAACATAGCATTACCAAAATTTCCTTTCTTACAAGCATTTCTACTTAGTTAAAAGACTCCAAAATTTCTCCACCAATCAAGAGAAAAATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATCCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGATGGGACTAGGACTATCGGGGATTCCTACTTCCAATCTTTGGATCACAAGTTCTCAGAATGTGGCGCATGGTGTTCTTTTTCTTCTTTCTTTTTCTTTTTTGGTGGCGTTTTCTGTTTTAATGACTGTTATGTGAAGGTTAAATGTGTAATGTG

mRNA sequence

CCAGAACTCATACGAGGAATGCGACAGAAGCTCCTGGAACCTCCTCCTTCCAACTCTTCTCAACACTTCCAGAAAATTCCTTCTTCACTCACTCATTCACAACGTCTATAAAACCCAACCAACCGTTCGCCATTCGTATCAACGAAAATTAGCTCTTCAATTTGCAAGAACATAGCATTACCAAAATTTCCTTTCTTACAAGCATTTCTACTTAGTTAAAAGACTCCAAAATTTCTCCACCAATCAAGAGAAAAATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATCCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGATGGGACTAGGACTATCGGGGATTCCTACTTCCAATCTTTGGATCACAAGTTCTCAGAATGTGGCGCATGGTGTTCTTTTTCTTCTTTCTTTTTCTTTTTTGGTGGCGTTTTCTGTTTTAATGACTGTTATGTGAAGGTTAAATGTGTAATGTG

Coding sequence (CDS)

ATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATCCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Protein sequence

MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN*

Homology

[Close]

BLAST of CsGy4G023890 vs. ExPASy Swiss-Prot
Match: P05477 (17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.8e-64
Identity = 121/158 (76.58%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEA---DKSFSTPTRAYVRDAKAMAATPADVKEYPNS 60
           MD R+MG++SP+F TLQH+MD++++    +K+ + PT +YVRDAKAMAATPADVKEYPNS
Sbjct: 1   MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNS 60

Query: 61  YVFVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPE 120
           YVF +DMPGLK GDI+VQVEDDN+LLI GERKR+EEKE AKY+RMERRVGKLMRKFVLPE
Sbjct: 61  YVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPE 120

Query: 121 NANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           NANTDAISAVCQDGVL+VTVQKLPPP+PKKP+ ++VKV
Sbjct: 121 NANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKV 158

[Close]

BLAST of CsGy4G023890 vs. ExPASy Swiss-Prot
Match: O82013 (17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.3e-63
Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 1   MDLRIMGID-SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYV 60
           MDLR++GID +P+F TL H+M+ A E   S + P++ YVRDAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLLGIDNTPLFHTLHHMMEAAGE--DSVNAPSKIYVRDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENA 120
           FVVDMPGLK GDI+VQVE+DNVLLISGERKREEEKE AK++RMERRVGK MRKF LPENA
Sbjct: 61  FVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENA 120

Query: 121 NTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           NTDAISAVCQDGVLTVTVQKLPPP+PKKPK +EVKV
Sbjct: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKV 154

[Close]

BLAST of CsGy4G023890 vs. ExPASy Swiss-Prot
Match: P19242 (17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.3e-60
Identity = 115/151 (76.16%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 6   MGIDSPIFSTLQHVMDLADE-ADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDM 65
           M +DSP+F+TL H+MDL D+  +K+ + PTR YVRDAKAMAATPADVKE+PNSYVF+VDM
Sbjct: 1   MDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDM 60

Query: 66  PGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAI 125
           PG+K GDI+VQVED+NVLLISGERKREEEKE  KY++MERR+GKLMRKFVLPENAN +AI
Sbjct: 61  PGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAI 120

Query: 126 SAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           SA+ QDGVLTVTV KLPPP+PKKPK ++VKV
Sbjct: 121 SAISQDGVLTVTVNKLPPPEPKKPKTIQVKV 151

[Close]

BLAST of CsGy4G023890 vs. ExPASy Swiss-Prot
Match: Q01544 (17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.4e-56
Identity = 113/157 (71.97%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLA-DEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYV 60
           MDLR+MG D P+F    H+MD A D+   + S P+R ++ DAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLMGFDHPLF---HHIMDYAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPEN 120
           F++DMPGLK GDI+VQV+ DNVL ISGERKRE EEKE AKYVRMERRVGKLMRKFVLPEN
Sbjct: 61  FIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPEN 120

Query: 121 ANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           AN + I+AVCQDGVLTVTV+ +PPP+PKKP+ +EVK+
Sbjct: 121 ANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154

[Close]

BLAST of CsGy4G023890 vs. ExPASy Swiss-Prot
Match: P46516 (17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.9e-52
Identity = 107/155 (69.03%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 5   IMGIDSPIFSTLQHVMDLADE---ADKS-FSTPTRAYVRDAKAMAATPADVKEYPNSYVF 64
           +MG D P+   L ++++  D+    +KS  S P+RAYVRDA+AMAATPADVKE PNSYVF
Sbjct: 6   LMGFD-PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVF 65

Query: 65  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 124
           +VDMPGLK GDI+VQVE DNVL+ISG+R REEEKE  KYVRMERR+GK M+KF LPE+AN
Sbjct: 66  IVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDAN 125

Query: 125 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           TD ISA+CQDGVLTVTV+KLPPP+PKKPK ++V+V
Sbjct: 126 TDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQV 159

[Close]

BLAST of CsGy4G023890 vs. NCBI nr
Match: XP_004141334.1 (17.9 kDa class II heat shock protein [Cucumis sativus])

HSP 1 Score: 301 bits (770), Expect = 1.05e-102
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
           TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

[Close]

BLAST of CsGy4G023890 vs. NCBI nr
Match: KAE8649916.1 (hypothetical protein Csa_012089 [Cucumis sativus])

HSP 1 Score: 301 bits (770), Expect = 3.05e-100
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 168 MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 227

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 228 VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 287

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
           TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 288 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 323

[Close]

BLAST of CsGy4G023890 vs. NCBI nr
Match: ADU55791.1 (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 291 bits (745), Expect = 6.80e-99
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CsGy4G023890 vs. NCBI nr
Match: XP_008452767.2 (PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis melo] >KAA0064521.1 17.9 kDa class II heat shock protein-like [Cucumis melo var. makuwa] >TYK20069.1 17.9 kDa class II heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 288 bits (738), Expect = 7.67e-98
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMG++SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKE-AKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
            DAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 155

[Close]

BLAST of CsGy4G023890 vs. NCBI nr
Match: XP_038898182.1 (17.9 kDa class II heat shock protein-like [Benincasa hispida])

HSP 1 Score: 287 bits (734), Expect = 3.23e-97
Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEY NSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYTNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLP+NAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPDNAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CsGy4G023890 vs. ExPASy TrEMBL
Match: A0A0A0L061 (Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus OX=3659 GN=Csa_4G646340 PE=3 SV=1)

HSP 1 Score: 301 bits (770), Expect = 5.07e-103
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
           TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

[Close]

BLAST of CsGy4G023890 vs. ExPASy TrEMBL
Match: H6TB44 (HSP17.4 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 291 bits (745), Expect = 3.29e-99
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CsGy4G023890 vs. ExPASy TrEMBL
Match: A0A5A7VFP7 (17.9 kDa class II heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001920 PE=3 SV=1)

HSP 1 Score: 288 bits (738), Expect = 3.71e-98
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMG++SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKE-AKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
            DAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 155

[Close]

BLAST of CsGy4G023890 vs. ExPASy TrEMBL
Match: A0A1S3BU21 (17.9 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103493686 PE=3 SV=1)

HSP 1 Score: 288 bits (738), Expect = 3.71e-98
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMG++SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKE-AKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
            DAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 155

[Close]

BLAST of CsGy4G023890 vs. ExPASy TrEMBL
Match: A0A6J1FMP1 (17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446600 PE=3 SV=1)

HSP 1 Score: 284 bits (726), Expect = 2.60e-96
Identity = 144/156 (92.31%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTL HVMDL DEADKSF+ PTR YVRDAKAMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156
            DAISAVCQDGVLTVTVQKLPPP+PKKPK+VEVKVN
Sbjct: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156

[Close]

BLAST of CsGy4G023890 vs. TAIR 10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein )

HSP 1 Score: 185.3 bits (469), Expect = 3.9e-47
Identity = 95/148 (64.19%), Postives = 123/148 (83.11%), Query Frame = 0


Query: 11  PIFSTLQHVMDLADE--ADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLK 70
           PI S L+ ++++ ++   +K+ + P+R Y+RDAKAMAATPADV E+PN+Y FVVDMPG+K
Sbjct: 7   PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIK 66

Query: 71  VGDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAV 130
             +I+VQVE+DNVL++SGER+RE +E E  KYVRMERR+GK MRKF LPENA+ D ISAV
Sbjct: 67  GDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAV 126

Query: 131 CQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           C DGVL VTVQKLPPP+PKKPK ++V+V
Sbjct: 127 CHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

[Close]

BLAST of CsGy4G023890 vs. TAIR 10
Match: AT5G12030.1 (heat shock protein 17.6A )

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44
Identity = 88/147 (59.86%), Postives = 122/147 (82.99%), Query Frame = 0


Query: 11  PIFSTLQHVMDLADE-ADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKV 70
           PIFS L+ +++  +E  +K+ + P+RAY+RDAKAMAATPADV E+P++YVF VDMPG+K 
Sbjct: 9   PIFSILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKG 68

Query: 71  GDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVC 130
            +IQVQ+E++NVL++SG+R+R+ +E E  K+VRMERR+GK MRKF LP+NA+ + ISA C
Sbjct: 69  DEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAAC 128

Query: 131 QDGVLTVTVQKLPPPQPKKPKIVEVKV 156
            DGVL VT+ KLPPP+PKKPK ++V+V
Sbjct: 129 NDGVLKVTIPKLPPPEPKKPKTIQVQV 155

[Close]

BLAST of CsGy4G023890 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-22
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 28  KSFSTPTRAY-----VRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVL 87
           + F TP+ A       RD  A      D KE P ++VF  D+PGLK  +++V+VED NVL
Sbjct: 28  EGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVL 87

Query: 88  LISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPP 147
            ISGER +E E++  K+ R+ER  GK MR+F LPENA  + + A  ++GVLTV V K P 
Sbjct: 88  QISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP- 147

Query: 148 PQPKKPKIVEVKVN 157
              KKP++  + ++
Sbjct: 148 --EKKPQVKSIDIS 158

[Close]

BLAST of CsGy4G023890 vs. TAIR 10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 53/114 (46.49%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 48  PADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLI--SGERKREEEKEE--AKYVRME 107
           P D+ E P  Y+F +D+PG+   DIQV VE++  L+I  +G+RKR++++ E  +KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 108 RRVGK-LMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           RR+ + L++KF LPE+A+  +++A  Q+GVLTV ++KL PPQP KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of CsGy4G023890 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 28  KSFSTP--TRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLIS 87
           + F TP  T A  +D  A      D +E P ++VF  D+PGLK  +++V+VED N+L IS
Sbjct: 28  EGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQIS 87

Query: 88  GERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQP 147
           GER  E E++   + R+ER  GK MR+F LPENA  + + A  ++GVL+VTV K+   Q 
Sbjct: 88  GERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKV---QE 147

Query: 148 KKPKIVEVKVN 157
            KP++  V ++
Sbjct: 148 SKPEVKSVDIS 155

The following BLAST results are available for this feature:

BLAST of CsGy4G023890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05477	5.8e-64	76.58	17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV...	[more]
O82013	8.3e-63	80.13	17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
P19242	2.3e-60	76.16	17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV...	[more]
Q01544	3.4e-56	71.97	17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1	[more]
P46516	3.9e-52	69.03	17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=...	[more]

BLAST of CsGy4G023890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141334.1	1.05e-102	100.00	17.9 kDa class II heat shock protein [Cucumis sativus]	[more]
KAE8649916.1	3.05e-100	100.00	hypothetical protein Csa_012089 [Cucumis sativus]	[more]
ADU55791.1	6.80e-99	96.15	HSP17.4 [Citrullus lanatus]	[more]
XP_008452767.2	7.67e-98	96.79	PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis melo] >KAA0064521....	[more]
XP_038898182.1	3.23e-97	94.87	17.9 kDa class II heat shock protein-like [Benincasa hispida]	[more]

BLAST of CsGy4G023890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L061	5.07e-103	100.00	Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus OX...	[more]
H6TB44	3.29e-99	96.15	HSP17.4 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5A7VFP7	3.71e-98	96.79	17.9 kDa class II heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BU21	3.71e-98	96.79	17.9 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC10349368...	[more]
A0A6J1FMP1	2.60e-96	92.31	17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CsGy4G023890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12020.1	3.9e-47	64.19	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	1.0e-44	59.86	heat shock protein 17.6A	[more]
AT5G59720.1	3.3e-22	43.28	heat shock protein 18.2	[more]
AT1G54050.1	2.1e-21	46.49	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.4e-20	41.98	heat shock protein 17.4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..112
None	No IPR available	PANTHER	PTHR11527:SF260	18.0 KDA CLASS II HEAT SHOCK PROTEIN	coord: 8..155
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 8..153 e-value: 9.4E-40 score: 137.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 15..150
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 e-value: 5.6E-29 score: 100.3
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 40..156 score: 28.635773
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 8..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G023890.2	CsGy4G023890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding