CsGy4G023680 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G023680
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	glutaredoxin-C6
Location	Gy14Chr4: 29678097 .. 29678504 (-)
RNA-Seq Expression	CsGy4G023680
Synteny	CsGy4G023680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGCCTCCGTCGCTGCTCCAACGACCTCCTCCACCTCGACTTATCTCCCCCGCCCTCTACCACCCCCTCCCCTGCCTCTCTCTCCATCGACGTCGCCGAATCCGCCGACACCCGTATTCGCCGCCTCATCTCCGAACATCCCGTCATCATTTTCAGCCGTACTTCTTGCTGCATGTGCCACGTCATGAAGAAACTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAATTAGAAGACGACGAGATCCACGCTCTCGCTTCTTTCTCCTCCACCACCACCGCTACTCCCGCTGTCTTCATCGGTGGGGCCTTCCTCGGCGGGCTTGAATCCCTCGTCGCTCTCCACCTCAGCGGTCATCTCGTTCCCAAGCTCGTCGAAGTAGGCGCTCTCTGGGTATGA

mRNA sequence

ATGCAAGGCCTCCGTCGCTGCTCCAACGACCTCCTCCACCTCGACTTATCTCCCCCGCCCTCTACCACCCCCTCCCCTGCCTCTCTCTCCATCGACGTCGCCGAATCCGCCGACACCCGTATTCGCCGCCTCATCTCCGAACATCCCGTCATCATTTTCAGCCGTACTTCTTGCTGCATGTGCCACGTCATGAAGAAACTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAATTAGAAGACGACGAGATCCACGCTCTCGCTTCTTTCTCCTCCACCACCACCGCTACTCCCGCTGTCTTCATCGGTGGGGCCTTCCTCGGCGGGCTTGAATCCCTCGTCGCTCTCCACCTCAGCGGTCATCTCGTTCCCAAGCTCGTCGAAGTAGGCGCTCTCTGGGTATGA

Coding sequence (CDS)

ATGCAAGGCCTCCGTCGCTGCTCCAACGACCTCCTCCACCTCGACTTATCTCCCCCGCCCTCTACCACCCCCTCCCCTGCCTCTCTCTCCATCGACGTCGCCGAATCCGCCGACACCCGTATTCGCCGCCTCATCTCCGAACATCCCGTCATCATTTTCAGCCGTACTTCTTGCTGCATGTGCCACGTCATGAAGAAACTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAATTAGAAGACGACGAGATCCACGCTCTCGCTTCTTTCTCCTCCACCACCACCGCTACTCCCGCTGTCTTCATCGGTGGGGCCTTCCTCGGCGGGCTTGAATCCCTCGTCGCTCTCCACCTCAGCGGTCATCTCGTTCCCAAGCTCGTCGAAGTAGGCGCTCTCTGGGTATGA

Protein sequence

MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLSGHLVPKLVEVGALWV*

Homology

[Close]

BLAST of CsGy4G023680 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 3.9e-40
Identity = 92/141 (65.25%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 3   GLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCMCH 62
           GL+R SND++ LDL+PP  T  S  SLSID  ES + +IRRLISEHPVIIFSR+SCCMCH
Sbjct: 6   GLQRFSNDVVRLDLTPPSQT--SSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCH 65

Query: 63  VMKKLLATIGVHPTVIELEDDEIHAL--------ASFSSTTTATPAVFIGGAFLGGLESL 122
           VMK+LLATIGV PTVIEL+D E+ +L        +   S     PAVFIG   +GGLESL
Sbjct: 66  VMKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESL 125

Query: 123 VALHLSGHLVPKLVEVGALWV 136
           VALHLSG LVPKLV+VGALWV
Sbjct: 126 VALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of CsGy4G023680 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.3e-39
Identity = 89/149 (59.73%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLS---PPPSTTPSPA-----------SLSIDVAESADTRIRRLIS 60
           M+GLR CSND + LDL+   PPP   P PA           SLS D  E+++++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGG 120
           EHPVIIF+R +SCCMCHVMKKLL+T+GVHPTVIE++D EI  LA       A P +FIGG
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLA-----VEAAPVLFIGG 123

Query: 121 AFLGGLESLVALHLSGHLVPKLVEVGALW 135
             +GG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 TCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of CsGy4G023680 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.6e-24
Identity = 56/99 (56.57%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 35  ESADTRIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVHPTVIELEDDEIHALASFSST 94
           E    RI RL+ E PV+IF+R  CCMCHVM++LLA +G H TVIEL++    A AS ++ 
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAAS-AAA 98

Query: 95  TTATPAVFIGGAFLGGLESLVALHLSGHLVPKLVEVGAL 134
             A PA+F+GGA +GGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  AAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of CsGy4G023680 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-20
Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 28  SLSIDVA---ESADTRIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVHPTVIELEDDE 87
           SL+ID A   E+   R+ RL+ E PV++F+R  C M HVM++LLA +G H TVIELE   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGGA 74

Query: 88  IHALASFSSTTTATPAVFIGGAFLGGLESLVALHLSGHLVPKLVEVGAL 134
                +      A PA+F+GG  +GGLE L+ LHLSG LVP+L EVGAL
Sbjct: 75  AEEEEAALGGGAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]

BLAST of CsGy4G023680 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.9e-20
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 40  RIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVHPTVIELEDDE-----IHALASFSST 99
           R+ RL ++  V+IFS +SCCMCH + +L   +GV+PTV+EL++D        ALA     
Sbjct: 3   RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGR 62

Query: 100 TTATPAVFIGGAFLGGLESLVALHLSGHLVPKLVEVGALWV 136
           + A PAVFIGG  +G  + +++LHLSG+LVP L   GALWV
Sbjct: 63  SPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of CsGy4G023680 vs. NCBI nr
Match: XP_004141321.1 (glutaredoxin-C6 [Cucumis sativus] >XP_008452734.1 PREDICTED: glutaredoxin-C6 [Cucumis melo] >KAA0064504.1 glutaredoxin-C6-like [Cucumis melo var. makuwa] >KGN55341.1 hypothetical protein Csa_012840 [Cucumis sativus] >TYK20086.1 glutaredoxin-C6-like [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (686), Expect = 1.40e-90
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS 120
           CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 135
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CsGy4G023680 vs. NCBI nr
Match: XP_038899998.1 (glutaredoxin-C6-like [Benincasa hispida])

HSP 1 Score: 248 bits (633), Expect = 1.82e-82
Identity = 127/137 (92.70%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLLHLDLSPPP TTPSPASLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPPTTPSPASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTT--ATPAVFIGGAFLGGLESLVALH 120
           CHVMKKLLATIGVHPTVIEL+DDEI AL+S SSTT   ATPAVFIGGAF+GGLESLVALH
Sbjct: 61  CHVMKKLLATIGVHPTVIELDDDEIDALSSCSSTTVPAATPAVFIGGAFVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALWV 135
           LSGHLVPKLVEVGALWV
Sbjct: 121 LSGHLVPKLVEVGALWV 137

[Close]

BLAST of CsGy4G023680 vs. NCBI nr
Match: KAG7024348.1 (Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231 bits (589), Expect = 9.28e-76
Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCS+DLLHLDLSPPP++ PS  SLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPAS-PSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTAT---PAVFIGGAFLGGLESLVAL 120
           CHVMKKLLATIGV+PTVIEL+D+EI ALA++S++TTAT   PAVFIGGAF+GGLESLVAL
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVAL 120

Query: 121 HLSGHLVPKLVEVGALWV 135
           HLSGHLVPKLVEVGALWV
Sbjct: 121 HLSGHLVPKLVEVGALWV 137

[Close]

BLAST of CsGy4G023680 vs. NCBI nr
Match: XP_023524422.1 (glutaredoxin-C6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230 bits (587), Expect = 1.75e-75
Identity = 121/136 (88.97%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLSPP S+ PS ASLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLLLDLSPP-SSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTT-TATPAVFIGGAFLGGLESLVALHL 120
           CHVMKKLLA+IGVHPTVIEL+D EI ALASFSSTT  ATPAVFIGG+++GGLESLVALHL
Sbjct: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAATPAVFIGGSYVGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 135
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of CsGy4G023680 vs. NCBI nr
Match: XP_022935887.1 (glutaredoxin-C6-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 230 bits (587), Expect = 1.87e-75
Identity = 118/138 (85.51%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCS+DLLHLDLSPPP++ PS  SLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPAS-PSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTA---TPAVFIGGAFLGGLESLVAL 120
           CHVMKKLLATIGV+PTVIEL+D+EI ALA++S++TTA   TPAVFIGGAF+GGLESLVAL
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTASTTTPAVFIGGAFVGGLESLVAL 120

Query: 121 HLSGHLVPKLVEVGALWV 135
           HLSGHLVPKLVEVGALW+
Sbjct: 121 HLSGHLVPKLVEVGALWI 137

[Close]

BLAST of CsGy4G023680 vs. ExPASy TrEMBL
Match: A0A5D3D950 (Glutaredoxin-C6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002100 PE=3 SV=1)

HSP 1 Score: 268 bits (686), Expect = 6.78e-91
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS 120
           CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 135
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CsGy4G023680 vs. ExPASy TrEMBL
Match: A0A0A0L5B1 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646150 PE=3 SV=1)

HSP 1 Score: 268 bits (686), Expect = 6.78e-91
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS 120
           CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 135
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CsGy4G023680 vs. ExPASy TrEMBL
Match: A0A1S3BUK1 (glutaredoxin-C6 OS=Cucumis melo OX=3656 GN=LOC103493666 PE=3 SV=1)

HSP 1 Score: 268 bits (686), Expect = 6.78e-91
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS 120
           CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 135
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CsGy4G023680 vs. ExPASy TrEMBL
Match: A0A6J1F6V2 (glutaredoxin-C6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE=3 SV=1)

HSP 1 Score: 230 bits (587), Expect = 9.07e-76
Identity = 118/138 (85.51%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCS+DLLHLDLSPPP++ PS  SLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPAS-PSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTA---TPAVFIGGAFLGGLESLVAL 120
           CHVMKKLLATIGV+PTVIEL+D+EI ALA++S++TTA   TPAVFIGGAF+GGLESLVAL
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTASTTTPAVFIGGAFVGGLESLVAL 120

Query: 121 HLSGHLVPKLVEVGALWV 135
           HLSGHLVPKLVEVGALW+
Sbjct: 121 HLSGHLVPKLVEVGALWI 137

[Close]

BLAST of CsGy4G023680 vs. ExPASy TrEMBL
Match: A0A6J1F5Z5 (glutaredoxin-C6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE=3 SV=1)

HSP 1 Score: 229 bits (585), Expect = 1.96e-75
Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCS+DLLHLDLSPPP++ PS  SLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPAS-PSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTA---TPAVFIGGAFLGGLESLVAL 120
           CHVMKKLLATIGV+PTVIEL+D+EI ALA++S++TTA   TPAVFIGGAF+GGLESLVAL
Sbjct: 61  CHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTASTTTPAVFIGGAFVGGLESLVAL 120

Query: 121 HLSGHLVPKLVEVGALW 134
           HLSGHLVPKLVEVGALW
Sbjct: 121 HLSGHLVPKLVEVGALW 136

[Close]

BLAST of CsGy4G023680 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-41
Identity = 92/141 (65.25%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 3   GLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCMCH 62
           GL+R SND++ LDL+PP  T  S  SLSID  ES + +IRRLISEHPVIIFSR+SCCMCH
Sbjct: 6   GLQRFSNDVVRLDLTPPSQT--SSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCH 65

Query: 63  VMKKLLATIGVHPTVIELEDDEIHAL--------ASFSSTTTATPAVFIGGAFLGGLESL 122
           VMK+LLATIGV PTVIEL+D E+ +L        +   S     PAVFIG   +GGLESL
Sbjct: 66  VMKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESL 125

Query: 123 VALHLSGHLVPKLVEVGALWV 136
           VALHLSG LVPKLV+VGALWV
Sbjct: 126 VALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of CsGy4G023680 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 5.2e-40
Identity = 89/149 (59.73%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLS---PPPSTTPSPA-----------SLSIDVAESADTRIRRLIS 60
           M+GLR CSND + LDL+   PPP   P PA           SLS D  E+++++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTATPAVFIGG 120
           EHPVIIF+R +SCCMCHVMKKLL+T+GVHPTVIE++D EI  LA       A P +FIGG
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLA-----VEAAPVLFIGG 123

Query: 121 AFLGGLESLVALHLSGHLVPKLVEVGALW 135
             +GG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 TCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of CsGy4G023680 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 8.6e-19
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60
           MQG   C+    + +++     +  P SL     +    R+R ++ E+ VI+  R  CCM
Sbjct: 1   MQGTISCAR---NYNMTTTVGESLRPLSLK---TQGNGERVRMVVEENAVIVIGRRGCCM 60

Query: 61  CHVMKKLLATIGVHPTVIEL----EDDEIHALASF----SSTTTATPAVFIGGAFLGGLE 120
           CHV+++LL  +GV+P V+E+    ED+ +  L +        T   PAV++GG   GGL+
Sbjct: 61  CHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLD 120

Query: 121 SLVALHLSGHLVPKLVEVGALWV 136
            ++A H+SG LVP L EVGALW+
Sbjct: 121 RVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of CsGy4G023680 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 41  IRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVHPTVIELED----DEI-HALASFSSTT 100
           ++++ISE  V+IFS+ SCCM H +K L   +GV+PT+ EL++     EI HALA    + 
Sbjct: 4   LQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSP 63

Query: 101 TATPAVFIGGAFLGGLESLVALHLSGHLVPKLVEVGALWV 136
           T  P VFIGG  +GG   +++LHL+  LVP L   GALW+
Sbjct: 64  T-VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of CsGy4G023680 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.8e-17
Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 22  TTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVHPTVIELE 81
           T+ SP   SI    S++     ++ E+ V++F+R  CC+ HV K+LL T GV+P V+E+ 
Sbjct: 41  TSGSPKPTSISNKRSSNL----VVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIG 100

Query: 82  DDEIHALASFSSTTTATPAVFIGGAFLGGLESLVALHLSGHLVPKLVEVGALWV 136
           +++ +   +  S     P ++IGG   GGLE+L+A H++G LVP L + GALW+
Sbjct: 101 EEDNNNYDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

The following BLAST results are available for this feature:

BLAST of CsGy4G023680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	3.9e-40	65.25	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	7.3e-39	59.73	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	8.6e-24	56.57	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q5SMY5	2.0e-20	50.46	Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2...	[more]
Q7G8Y5	9.9e-20	47.52	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of CsGy4G023680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141321.1	1.40e-90	100.00	glutaredoxin-C6 [Cucumis sativus] >XP_008452734.1 PREDICTED: glutaredoxin-C6 [Cu...	[more]
XP_038899998.1	1.82e-82	92.70	glutaredoxin-C6-like [Benincasa hispida]	[more]
KAG7024348.1	9.28e-76	86.23	Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023524422.1	1.75e-75	88.97	glutaredoxin-C6 [Cucurbita pepo subsp. pepo]	[more]
XP_022935887.1	1.87e-75	85.51	glutaredoxin-C6-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CsGy4G023680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D950	6.78e-91	100.00	Glutaredoxin-C6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134...	[more]
A0A0A0L5B1	6.78e-91	100.00	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G64615...	[more]
A0A1S3BUK1	6.78e-91	100.00	glutaredoxin-C6 OS=Cucumis melo OX=3656 GN=LOC103493666 PE=3 SV=1	[more]
A0A6J1F6V2	9.07e-76	85.51	glutaredoxin-C6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE...	[more]
A0A6J1F5Z5	1.96e-75	86.13	glutaredoxin-C6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE...	[more]

BLAST of CsGy4G023680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	2.7e-41	65.25	Thioredoxin superfamily protein	[more]
AT5G11930.1	5.2e-40	59.73	Thioredoxin superfamily protein	[more]
AT1G28480.1	8.6e-19	36.36	Thioredoxin superfamily protein	[more]
AT4G15700.1	1.6e-17	46.00	Thioredoxin superfamily protein	[more]
AT1G03850.2	2.8e-17	38.60	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 105..118 score: 30.95 coord: 91..104 score: 27.68 coord: 50..68 score: 35.31
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 50..107 e-value: 1.4E-8 score: 34.8
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 31..134 e-value: 9.3E-26 score: 91.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 6..134
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 38..134 score: 20.226818
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 49..126 e-value: 9.88181E-28 score: 96.0695
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 41..135 e-value: 7.5E-36 score: 120.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 6..134
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 40..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G023680.2	CsGy4G023680.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity