CsGy4G023495 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G023495
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 29577286 .. 29578238 (+)
RNA-Seq ExpressionCsGy4G023495
SyntenyCsGy4G023495
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAAAACCACGAATCTCTTCTCGAAATGTTGTAAAGTAACTTTGGAAAATGAGTTCTAAATTTTGAGATTTAAGAAATAATTAGTTAACAATAAAAATAAAGATCGGAGTTGATAATAAGATAACTGAGTTAACACAAATGAGAAGCGAGAAATGTGGGTGTTAGTGAATAATATGAGTTAGATTTCCGGTTGCCATCATCCCCTTAGGGTTAGGTTAAAAGAAATAAAAGAAAAACGTCTCTCAGCGGCGACATCTCGTTACGCACTCTCTCTACCTTTCGCGCCTCCCGATCTCTCGCGCCCATCAACGTTACCTCTTGCTCCGCCTTCTCCGACGCCTACACGCCGCCGGCTACTGCAGGTCCGTTTCTCTCTCTCTCTCTCCCCCTGCGTGATTTGGTGCATAGCTTTCGTTCATTCAGTATTTTTGTTCTCTACCTCACAGCACTCTCTGTATCCTCTGTGTTTCTCTCCTGCAGCTGCAACCGGAAGCTACCAGTCACCACCGTTCAGACGACGTCCGACATCCCTCAGGACAGTAGCCAGTCCGTTGCCCAGCAAGTGTTTTGCACGTCAGTCTAGGTGCGGTGTTTCCTTCTAGTTTCTGAACTATTCTCGCTATATTGATTATTCACTCTGTGGTGGGCTTTATATTCACAAATCCGAGGAGTTTTAGCTAAATGACTATTACAAGGCTCTGAACTCGTCTTTGAATTTACTATCTAATGTTACTTTAGAGTTATAAACCTTGAATTTTCCTTGTGCTTAGAATTGGGCGGTTCGTTGAGGTTAAGAAACTAATTTTGGAATGGATATCGGGGAAATTTTCTAGTCACCATGGGAGAAATGAAAATGTTAAAGTAGTTTGGGTCTCCAAAAGCTTGACAATAAATGGAATTATGTTGGTAAGATTGGATGCAGATTTTCGGAAACTGAAAGCAAATTGA

mRNA sequence

ATGAACAAAAACCACGAATCTCTTCTCGAAATGTTCGGCGACATCTCGTTACGCACTCTCTCTACCTTTCGCGCCTCCCGATCTCTCGCGCCCATCAACGTTACCTCTTGCTCCGCCTTCTCCGACGCCTACACGCCGCCGGCTACTGCAGCTGCAACCGGAAGCTACCAGTCACCACCGTTCAGACGACGTCCGACATCCCTCAGGACAGTAGCCAGTCCGTTGCCCAGCAAGTGTTTTGCACGTCAGTCTAGAATTGGGCGGTTCGTTGAGGTTAAGAAACTAATTTTGGAATGGATATCGGGGAAATTTTCTAGTCACCATGGGAGAAATGAAAATGTTAAAGTAGTTTGGGTCTCCAAAAGCTTGACAATAAATGGAATTATGTTGGTAAGATTGGATGCAGATTTTCGGAAACTGAAAGCAAATTGA

Coding sequence (CDS)

ATGAACAAAAACCACGAATCTCTTCTCGAAATGTTCGGCGACATCTCGTTACGCACTCTCTCTACCTTTCGCGCCTCCCGATCTCTCGCGCCCATCAACGTTACCTCTTGCTCCGCCTTCTCCGACGCCTACACGCCGCCGGCTACTGCAGCTGCAACCGGAAGCTACCAGTCACCACCGTTCAGACGACGTCCGACATCCCTCAGGACAGTAGCCAGTCCGTTGCCCAGCAAGTGTTTTGCACGTCAGTCTAGAATTGGGCGGTTCGTTGAGGTTAAGAAACTAATTTTGGAATGGATATCGGGGAAATTTTCTAGTCACCATGGGAGAAATGAAAATGTTAAAGTAGTTTGGGTCTCCAAAAGCTTGACAATAAATGGAATTATGTTGGTAAGATTGGATGCAGATTTTCGGAAACTGAAAGCAAATTGA

Protein sequence

MNKNHESLLEMFGDISLRTLSTFRASRSLAPINVTSCSAFSDAYTPPATAAATGSYQSPPFRRRPTSLRTVASPLPSKCFARQSRIGRFVEVKKLILEWISGKFSSHHGRNENVKVVWVSKSLTINGIMLVRLDADFRKLKAN*
Homology
[Close]
BLAST of CsGy4G023495 vs. NCBI nr
Match: KGN55321.1 (hypothetical protein Csa_012071 [Cucumis sativus])

HSP 1 Score: 279 bits (714), Expect = 1.37e-94
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MNKNHESLLEMFGDISLRTLSTFRASRSLAPINVTSCSAFSDAYTPPATAAATGSYQSPP 60
           MNKNHESLLEMFGDISLRTLSTFRASRSLAPINVTSCSAFSDAYTPPATAAATGSYQSPP
Sbjct: 1   MNKNHESLLEMFGDISLRTLSTFRASRSLAPINVTSCSAFSDAYTPPATAAATGSYQSPP 60

Query: 61  FRRRPTSLRTVASPLPSKCFARQSRIGRFVEVKKLILEWISGKFSSHHGRNENVKVVWVS 120
           FRRRPTSLRTVASPLPSKCFARQSRIGRFVEVKKLILEWISGKFSSHHGRNENVKVVWVS
Sbjct: 61  FRRRPTSLRTVASPLPSKCFARQSRIGRFVEVKKLILEWISGKFSSHHGRNENVKVVWVS 120

Query: 121 KSLTINGIMLVRLDADFRKLKAN 143
           KSLTINGIMLVRLDADFRKLKAN
Sbjct: 121 KSLTINGIMLVRLDADFRKLKAN 143

[Close]
BLAST of CsGy4G023495 vs. ExPASy TrEMBL
Match: A0A0A0L590 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645940 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 6.62e-95
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MNKNHESLLEMFGDISLRTLSTFRASRSLAPINVTSCSAFSDAYTPPATAAATGSYQSPP 60
           MNKNHESLLEMFGDISLRTLSTFRASRSLAPINVTSCSAFSDAYTPPATAAATGSYQSPP
Sbjct: 1   MNKNHESLLEMFGDISLRTLSTFRASRSLAPINVTSCSAFSDAYTPPATAAATGSYQSPP 60

Query: 61  FRRRPTSLRTVASPLPSKCFARQSRIGRFVEVKKLILEWISGKFSSHHGRNENVKVVWVS 120
           FRRRPTSLRTVASPLPSKCFARQSRIGRFVEVKKLILEWISGKFSSHHGRNENVKVVWVS
Sbjct: 61  FRRRPTSLRTVASPLPSKCFARQSRIGRFVEVKKLILEWISGKFSSHHGRNENVKVVWVS 120

Query: 121 KSLTINGIMLVRLDADFRKLKAN 143
           KSLTINGIMLVRLDADFRKLKAN
Sbjct: 121 KSLTINGIMLVRLDADFRKLKAN 143

The following BLAST results are available for this feature:
BLAST of CsGy4G023495 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy4G023495 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55321.11.37e-94100.00hypothetical protein Csa_012071 [Cucumis sativus][more]
BLAST of CsGy4G023495 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5906.62e-95100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645940 PE=4 SV=1[more]
BLAST of CsGy4G023495 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G023495.1CsGy4G023495.1mRNA