CsGy4G023117 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G023117
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 29288863 .. 29289207 (-)
RNA-Seq ExpressionCsGy4G023117
SyntenyCsGy4G023117
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTATGTTTTTATTGCTCAGTTGGTGGGTTGAGTGAGAAGTTTGAATTTTGTGTGGTGAAGCAATGGAAAATGGCGAATGGTCGTTATCTGTTGGAATGTGGTTGTTATGTGTTTCCCTTCTTTACTTGTCAATATCTTTACGTTCATAATGTTTTCAACACATGCATGTACTGCCTCGTCTTTCAGTCTCTCACCTGCCCCTTCGGCTCAATTAAGAATACATCACCATCGTTTTCCAACCTTTATTTTATGGTTTATATCGTTTCTTCTTCATCTAGTCCATTATCTTGGCTTCTCTTCTTGAGAGTATTTCTTGGTTTATGCTATTTCTACAATTAG

mRNA sequence

ATGAATGTATGTTTTTATTGCTCAGTTGGTGGGTTGAGTGAGAAGTTTGAATTTTGTGTGGTGAAGCAATGGAAAATGGCGAATGGTCGTTATCTGTTGGAATGTGGTTGTTATGTGTTTCCCTTCTTTACTTGTCAATATCTTTACGTTCATAATGTTTTCAACACATGCATGTACTGCCTCGTCTTTCAGTCTCTCACCTGCCCCTTCGGCTCAATTAAGAATACATCACCATCGTTTTCCAACCTTTATTTTATGGTTTATATCGTTTCTTCTTCATCTAGTCCATTATCTTGGCTTCTCTTCTTGAGAGTATTTCTTGGTTTATGCTATTTCTACAATTAG

Coding sequence (CDS)

ATGAATGTATGTTTTTATTGCTCAGTTGGTGGGTTGAGTGAGAAGTTTGAATTTTGTGTGGTGAAGCAATGGAAAATGGCGAATGGTCGTTATCTGTTGGAATGTGGTTGTTATGTGTTTCCCTTCTTTACTTGTCAATATCTTTACGTTCATAATGTTTTCAACACATGCATGTACTGCCTCGTCTTTCAGTCTCTCACCTGCCCCTTCGGCTCAATTAAGAATACATCACCATCGTTTTCCAACCTTTATTTTATGGTTTATATCGTTTCTTCTTCATCTAGTCCATTATCTTGGCTTCTCTTCTTGAGAGTATTTCTTGGTTTATGCTATTTCTACAATTAG

Protein sequence

MNVCFYCSVGGLSEKFEFCVVKQWKMANGRYLLECGCYVFPFFTCQYLYVHNVFNTCMYCLVFQSLTCPFGSIKNTSPSFSNLYFMVYIVSSSSSPLSWLLFLRVFLGLCYFYN*
Homology
[Close]
BLAST of CsGy4G023117 vs. NCBI nr
Match: KGN55275.1 (hypothetical protein Csa_012646 [Cucumis sativus])

HSP 1 Score: 243 bits (619), Expect = 4.86e-81
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0 

Query: 1   MNVCFYCSVGGLSEKFEFCVVKQWKMANGRYLLECGCYVFPFFTCQYLYVHNVFNTCMYC 60
           MNVCFYCSVGGLSEKFEFCVVKQWKMANGRYLLECGCYVF FFTCQYLYVHNVFNTCMYC
Sbjct: 1   MNVCFYCSVGGLSEKFEFCVVKQWKMANGRYLLECGCYVFAFFTCQYLYVHNVFNTCMYC 60

Query: 61  LVFQSLTCPFGSIKNTSPSFSNLYFMVYIVSSSSSPLSWLLFLRVFLGLCYFYN 114
           LVFQSLTCPFGSIKNTSPSFSNLYFMVYIVSSSSSPLSWLLFLRVFLGLCYFYN
Sbjct: 61  LVFQSLTCPFGSIKNTSPSFSNLYFMVYIVSSSSSPLSWLLFLRVFLGLCYFYN 114

[Close]
BLAST of CsGy4G023117 vs. ExPASy TrEMBL
Match: A0A0A0KZY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642560 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 2.36e-81
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0 

Query: 1   MNVCFYCSVGGLSEKFEFCVVKQWKMANGRYLLECGCYVFPFFTCQYLYVHNVFNTCMYC 60
           MNVCFYCSVGGLSEKFEFCVVKQWKMANGRYLLECGCYVF FFTCQYLYVHNVFNTCMYC
Sbjct: 1   MNVCFYCSVGGLSEKFEFCVVKQWKMANGRYLLECGCYVFAFFTCQYLYVHNVFNTCMYC 60

Query: 61  LVFQSLTCPFGSIKNTSPSFSNLYFMVYIVSSSSSPLSWLLFLRVFLGLCYFYN 114
           LVFQSLTCPFGSIKNTSPSFSNLYFMVYIVSSSSSPLSWLLFLRVFLGLCYFYN
Sbjct: 61  LVFQSLTCPFGSIKNTSPSFSNLYFMVYIVSSSSSPLSWLLFLRVFLGLCYFYN 114

The following BLAST results are available for this feature:
BLAST of CsGy4G023117 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy4G023117 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55275.14.86e-8199.12hypothetical protein Csa_012646 [Cucumis sativus][more]
BLAST of CsGy4G023117 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZY22.36e-8199.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642560 PE=4 SV=1[more]
BLAST of CsGy4G023117 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G023117.1CsGy4G023117.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane