CsGy4G022455 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G022455
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr4: 28921902 .. 28922102 (-)
RNA-Seq Expression	CsGy4G022455
Synteny	CsGy4G022455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGGAGTGACGGTGGGGTGAGTATATCAGGAGGCACAGGCGGTGGAGCAAAAGAGGAAAAATCACGTGAAAATCTGACATCTCTTTTACCGATATGGCGACGGCGCGGTGACGTCGTTTTTGTTAATCAAATACATTCCCTCCGCCGCATCCCATCATCGGCCACCGTGAATACTCACACCCTTCTAACAAATTAA

mRNA sequence

ATGAAAGGGAGTGACGGTGGGGTGAGTATATCAGGAGGCACAGGCGGTGGAGCAAAAGAGGAAAAATCACGTGAAAATCTGACATCTCTTTTACCGATATGGCGACGGCGCGGTGACGTCGTTTTTGTTAATCAAATACATTCCCTCCGCCGCATCCCATCATCGGCCACCGTGAATACTCACACCCTTCTAACAAATTAA

Coding sequence (CDS)

ATGAAAGGGAGTGACGGTGGGGTGAGTATATCAGGAGGCACAGGCGGTGGAGCAAAAGAGGAAAAATCACGTGAAAATCTGACATCTCTTTTACCGATATGGCGACGGCGCGGTGACGTCGTTTTTGTTAATCAAATACATTCCCTCCGCCGCATCCCATCATCGGCCACCGTGAATACTCACACCCTTCTAACAAATTAA

Protein sequence

MKGSDGGVSISGGTGGGAKEEKSRENLTSLLPIWRRRGDVVFVNQIHSLRRIPSSATVNTHTLLTN*

Homology

[Close]

BLAST of CsGy4G022455 vs. NCBI nr
Match: KGN55202.1 (hypothetical protein Csa_012034 [Cucumis sativus])

HSP 1 Score: 125 bits (315), Expect = 3.75e-36
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 1  MKGSDGGVSISGGTGGGAKEEKSRENLTSLLPIWRRRGDVVFVNQIHSLRRIPSSATVNT 60
          MKGSDGGVSISG TGGGAKEEKSRENLTSLLPIWRRRGDVVFVNQIHSLR IPSSATVNT
Sbjct: 1  MKGSDGGVSISGRTGGGAKEEKSRENLTSLLPIWRRRGDVVFVNQIHSLRHIPSSATVNT 60

Query: 61 HTLLTN 66
          HTLLTN
Sbjct: 61 HTLLTN 66

[Close]

BLAST of CsGy4G022455 vs. ExPASy TrEMBL
Match: A0A0A0L3L2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639895 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 1.82e-36
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 1  MKGSDGGVSISGGTGGGAKEEKSRENLTSLLPIWRRRGDVVFVNQIHSLRRIPSSATVNT 60
          MKGSDGGVSISG TGGGAKEEKSRENLTSLLPIWRRRGDVVFVNQIHSLR IPSSATVNT
Sbjct: 1  MKGSDGGVSISGRTGGGAKEEKSRENLTSLLPIWRRRGDVVFVNQIHSLRHIPSSATVNT 60

Query: 61 HTLLTN 66
          HTLLTN
Sbjct: 61 HTLLTN 66

The following BLAST results are available for this feature:

BLAST of CsGy4G022455 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G022455 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55202.1	3.75e-36	96.97	hypothetical protein Csa_012034 [Cucumis sativus]	[more]

BLAST of CsGy4G022455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3L2	1.82e-36	96.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639895 PE=4 SV=1	[more]

BLAST of CsGy4G022455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G022455.1	CsGy4G022455.1	mRNA