CsGy4G021720 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G021720
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Squamosa promoter-binding protein
Location	Gy14Chr4: 28336427 .. 28338216 (-)
RNA-Seq Expression	CsGy4G021720
Synteny	CsGy4G021720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGAATGTTTTAAACTATTATTGTCACACAAGAGTATGATCTCATGAAAATTTTAAAACTATCGATTAAAAGGTTAGAGGTTTTAATGCGGAGAATACTAGTTCGAAGAATAATGTAAATAATAATTTGAGTTTGTTAGAAACATAAAATTGATTAATAAATCCTACTTTGGACATTCTGTCCTTCACTATTTCATCACTCACAAGAAAAAACTGTGGTCCTCACCACTTTTTTTGCTTTCCTACCTTTTTCTTCCAGTCTCATACTCTTGATGTAACTTCTTTAAGTTCCTATATTTTTGCTCCAACCATTTCCACAGCAAGCATCAACAGAACACCACCACCATTGGTACAGCTACTGAGCTGCCGGAGTTGGCAATGGATGCAAAGAGCTTTGAAGGCAAGCATAATTTCAAAGATAAGACAGTGGTCGATGACGATTTCGAATACGAGACGGAAGAGGAGGAGGTTGGTGGTGGAGGAGGAGGAGGTAGCAACAGCAATGCTTGCAATGCATTGGGTTATTTTGACAATGAGAAAAAGAAAAGAGGGGCAGCAGTTTCTGGCCGTGGAAAGTCTGGTGGAAGCGTCTCTTTGCCGAGTTGCCAAGCGCATAACTGTGCAGCAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCATAAGGTCTGCGAGTTTCACTCGAAGGCGGCCATCGTCATGGTTGCTGGAATTCGCCAACGGTTCTGTCAGCAATGCAGCAGGTATTAGATCTTCCTCAACAATATAAGCAACAACATTTTAAGTTAACATTCTTTCCTCTTTCTGTTTGGCCATTGGTAATATGTTTGTTTGTTGGTGAGTGATGATCAGGTTCCATGAGTTAACAGAATTTGACGAAGCAAAAAGGAGCTGTCGTCGTAGGCTAGCAGGGCACAACGAACGGCGACGTAAGAGCTCAGCAGAGAGCCAAGGGGAAAGCACAAGCCGCAAAGGATCAGCTCCACAGGCGCAGTCAAAGGAAAGCCATTGCAGGCAGTTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGTTATAAGCACTTGCATATCAGATAAAAGGAGACTATCTATGTATCTTTGCTCTCTCTCTTCTGTCACTGGGAAATGAAAGACATTCATAGAATCCCATGTTTTTCTTGAATTTGGCTTAACCAACATCTCAGTTGGGTGCTTTGTTTTTCCCTGTCTTAATTTTCAAATATTGTAGACTGGTTTGTTTCTTGTTTTGTGGTCCCTTGTCTACTAAAACATTGCATCCTCTGGCTATAAATTTTAATATGCAAAGCTTTATTTTTAAAGGATTTCAAAACCCACAAAGGAGAAGGGTTGTAAAATGGACAGATTTGTGATAGGTCCTAAAACAGAAGTTCAGAAGATTTAACATCAACCGCAGAGAAGCATTTGATACAGCCATACAGGGATAAATATAAGTTCATGTTTGACTAAAATCCACAACTTAGTTTATTTGGGATTCCCAACACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTTGGAACTAGTTCTTTATGTTCTTTCATTTTTCAGCCGTTGGGACAGAACCAGAAATCCATGATGAAACTCAGTGAAATCTCACAACTATACAAGAGATATCATCTTTGCTCTTCCTCTTGAGGGCTTCCTCTGTCAGGTGTTTGGCAGCTGCATGGGCGTCTTTTATATGCTTGATTGACTCCACGGCTTCTTCGTTTGACATGACCT

mRNA sequence

CTTTGAATGTTTTAAACTATTATTGTCACACAAGAGTATGATCTCATGAAAATTTTAAAACTATCGATTAAAAGGTTAGAGGTTTTAATGCGGAGAATACTAGTTCGAAGAATAATGTAAATAATAATTTGAGTTTGTTAGAAACATAAAATTGATTAATAAATCCTACTTTGGACATTCTGTCCTTCACTATTTCATCACTCACAAGAAAAAACTGTGGTCCTCACCACTTTTTTTGCTTTCCTACCTTTTTCTTCCAGTCTCATACTCTTGATGTAACTTCTTTAAGTTCCTATATTTTTGCTCCAACCATTTCCACAGCAAGCATCAACAGAACACCACCACCATTGGTACAGCTACTGAGCTGCCGGAGTTGGCAATGGATGCAAAGAGCTTTGAAGGCAAGCATAATTTCAAAGATAAGACAGTGGTCGATGACGATTTCGAATACGAGACGGAAGAGGAGGAGGTTGGTGGTGGAGGAGGAGGAGGTAGCAACAGCAATGCTTGCAATGCATTGGGTTATTTTGACAATGAGAAAAAGAAAAGAGGGGCAGCAGTTTCTGGCCGTGGAAAGTCTGGTGGAAGCGTCTCTTTGCCGAGTTGCCAAGCGCATAACTGTGCAGCAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCATAAGGTCTGCGAGTTTCACTCGAAGGCGGCCATCGTCATGGTTGCTGGAATTCGCCAACGGTTCTGTCAGCAATGCAGCAGGTTCCATGAGTTAACAGAATTTGACGAAGCAAAAAGGAGCTGTCGTCGTAGGCTAGCAGGGCACAACGAACGGCGACGTAAGAGCTCAGCAGAGAGCCAAGGGGAAAGCACAAGCCGCAAAGGATCAGCTCCACAGGCGCAGTCAAAGGAAAGCCATTGCAGGCAGTTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGTTATAAGCACTTGCATATCAGATAAAAGGAGACTATCTATGTATCTTTGCTCTCTCTCTTCTGTCACTGGGAAATGAAAGACATTCATAGAATCCCATGTTTTTCTTGAATTTGGCTTAACCAACATCTCAGTTGGGTGCTTTGTTTTTCCCTGTCTTAATTTTCAAATATTGTAGACTGGTTTGTTTCTTGTTTTGTGGTCCCTTGTCTACTAAAACATTGCATCCTCTGGCTATAAATTTTAATATGCAAAGCTTTATTTTTAAAGGATTTCAAAACCCACAAAGGAGAAGGGTTGTAAAATGGACAGATTTGTGATAGGTCCTAAAACAGAAGTTCAGAAGATTTAACATCAACCGCAGAGAAGCATTTGATACAGCCATACAGGGATAAATATAAGTTCATGTTTGACTAAAATCCACAACTTAGTTTATTTGGGATTCCCAACACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTTGGAACTAGTTCTTTATGTTCTTTCATTTTTCAGCCGTTGGGACAGAACCAGAAATCCATGATGAAACTCAGTGAAATCTCACAACTATACAAGAGATATCATCTTTGCTCTTCCTCTTGAGGGCTTCCTCTGTCAGGTGTTTGGCAGCTGCATGGGCGTCTTTTATATGCTTGATTGACTCCACGGCTTCTTCGTTTGACATGACCT

Coding sequence (CDS)

ATGGATGCAAAGAGCTTTGAAGGCAAGCATAATTTCAAAGATAAGACAGTGGTCGATGACGATTTCGAATACGAGACGGAAGAGGAGGAGGTTGGTGGTGGAGGAGGAGGAGGTAGCAACAGCAATGCTTGCAATGCATTGGGTTATTTTGACAATGAGAAAAAGAAAAGAGGGGCAGCAGTTTCTGGCCGTGGAAAGTCTGGTGGAAGCGTCTCTTTGCCGAGTTGCCAAGCGCATAACTGTGCAGCAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCATAAGGTCTGCGAGTTTCACTCGAAGGCGGCCATCGTCATGGTTGCTGGAATTCGCCAACGGTTCTGTCAGCAATGCAGCAGGTTCCATGAGTTAACAGAATTTGACGAAGCAAAAAGGAGCTGTCGTCGTAGGCTAGCAGGGCACAACGAACGGCGACGTAAGAGCTCAGCAGAGAGCCAAGGGGAAAGCACAAGCCGCAAAGGATCAGCTCCACAGGCGCAGTCAAAGGAAAGCCATTGCAGGCAGTTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGTTATAAGCACTTGCATATCAGATAA

Protein sequence

MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVEDQRSRIQMAPPGSSGYKHLHIR*

Homology

[Close]

BLAST of CsGy4G021720 vs. ExPASy Swiss-Prot
Match: Q6Z461 (Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL13 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 82/149 (55.03%), Postives = 98/149 (65.77%), Query Frame = 0


Query: 31  VGGGGGGGSNSNACNALGYFDNEKK-------KRGAAVSGRGKSGGSVSLPSCQAHNCAA 90
           V GGGGGGS+S+A  A G   +          +RGA  +G G   G    P CQ   C  
Sbjct: 58  VAGGGGGGSSSSAAVAAGASSSSSSSSVAAAARRGAGRAGGGAPSGGGGGPRCQVERCGV 117

Query: 91  DLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGH 150
           DLSEA RY+RRHKVC+ HSK  +V+VAG+RQRFCQQCSRFHELTEFD+AKRSCRRRLAGH
Sbjct: 118 DLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRSCRRRLAGH 177

Query: 151 NERRRKSSAESQGESTSRKGSAPQAQSKE 173
           NERRRKS+A++      R       +S +
Sbjct: 178 NERRRKSAADTAHGENCRHADQDAGRSHQ 206

[Close]

BLAST of CsGy4G021720 vs. ExPASy Swiss-Prot
Match: Q9S7A9 (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.2e-33
Identity = 94/205 (45.85%), Postives = 121/205 (59.02%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKT-VVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGA 60
           M+ K  +G+   K K+ +V++D E +T+EEE  G                 D  +  RG+
Sbjct: 1   MEGKRSQGQGYMKKKSYLVEEDMETDTDEEEEVGR----------------DRVRGSRGS 60

Query: 61  AVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQ 120
                   GGS+ L  CQ   C AD+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQQ
Sbjct: 61  I-----NRGGSLRL--CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQ 120

Query: 121 CSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAES-QGESTSRKGSAPQAQSKESHCRQL 180
           CSRFH+L EFDEAKRSCRRRLAGHNERRRKSS ES  GE + R+G   Q          +
Sbjct: 121 CSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV--------VM 174

Query: 181 VEDQRSRIQMA-PPGSSGYKHLHIR 203
              +RSR++M  P  +S +K   IR
Sbjct: 181 QNQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of CsGy4G021720 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.4e-31
Identity = 78/154 (50.65%), Postives = 98/154 (63.64%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           MD    EGK   K    +    E   EE+++G                  ++ KK R   
Sbjct: 1   MDTSKGEGKRVIK----LPGSQEQGEEEDDIG------------------EDSKKTRALT 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
            SG+  SG +    SCQ  NCAA+++ AK YHRRHKVCEFH+KA +V+ +G++QRFCQQC
Sbjct: 61  PSGKRASGSTQR--SCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGLQQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAES 155
           SRFHEL+EFDEAKRSCRRRLAGHNERRRKSS ++
Sbjct: 121 SRFHELSEFDEAKRSCRRRLAGHNERRRKSSHDT 130

[Close]

BLAST of CsGy4G021720 vs. ExPASy Swiss-Prot
Match: Q9S758 (Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-30
Identity = 87/203 (42.86%), Postives = 114/203 (56.16%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           M+ +  + +   KDK  V +  E E E    G    GG             +E K++   
Sbjct: 1   MEGQRTQRRGYLKDKATVSNLVEEEMENGMDGEEEDGG-------------DEDKRKKVM 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
              RG S   V    CQ   C  +L+EAK+Y+RRH+VCE H+KA+   VAG+RQRFCQQC
Sbjct: 61  ERVRGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180
           SRFHEL EFDEAKRSCRRRLAGHNERRRK S +S GE + R+G + Q          +  
Sbjct: 121 SRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRRGFSGQL---------IQT 180

Query: 181 DQRSRI-QMAPPGSSGYKHLHIR 203
            +R+R+ +  P  +S +K   IR
Sbjct: 181 QERNRVDRKLPMTNSSFKRPQIR 181

[Close]

BLAST of CsGy4G021720 vs. ExPASy Swiss-Prot
Match: P93015 (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3 PE=1 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 73/147 (49.66%), Postives = 97/147 (65.99%), Query Frame = 0


Query: 7   EGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAAVSGRGK 66
           EGK + ++ +  +++ E ETE+E+               AL     EKK++G A S  G 
Sbjct: 9   EGKRSLRELSEEEEE-EEETEDED---------TFEEEEAL-----EKKQKGKATSSSG- 68

Query: 67  SGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHEL 126
                    CQ  +C AD+S+AK+YH+RHKVC+FH+KA  V ++G+ QRFCQQCSRFH L
Sbjct: 69  --------VCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHAL 128

Query: 127 TEFDEAKRSCRRRLAGHNERRRKSSAE 154
           +EFDEAKRSCRRRLAGHNERRRKS+ +
Sbjct: 129 SEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]

BLAST of CsGy4G021720 vs. NCBI nr
Match: XP_004146058.1 (squamosa promoter-binding protein 1 [Cucumis sativus] >KGN55117.1 hypothetical protein Csa_012264 [Cucumis sativus])

HSP 1 Score: 400 bits (1027), Expect = 2.23e-140
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA
Sbjct: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
           VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC
Sbjct: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180
           SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE
Sbjct: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 202
           DQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPPGSSGYKHLHIR 202

[Close]

BLAST of CsGy4G021720 vs. NCBI nr
Match: KAA0066825.1 (squamosa promoter-binding protein 1 [Cucumis melo var. makuwa] >TYK27972.1 squamosa promoter-binding protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 379 bits (972), Expect = 5.05e-132
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           MDAKSFEGKHN KDKTVVDDDFEYETEEEEVGGGGGG SNSNACNALGYFDNEK+KRGAA
Sbjct: 1   MDAKSFEGKHNSKDKTVVDDDFEYETEEEEVGGGGGG-SNSNACNALGYFDNEKRKRGAA 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
           VSGRGKSGGSVS PSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC
Sbjct: 61  VSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180
           SRFHELTEFDEAKRSCRRRLAGHNERRRK+SAESQGESTSRK SAPQAQSKESHCRQLVE
Sbjct: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRK-SAPQAQSKESHCRQLVE 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 202
           DQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPPGSSGYKHLHIR 200

[Close]

BLAST of CsGy4G021720 vs. NCBI nr
Match: XP_038898687.1 (squamosa promoter-binding-like protein 3 [Benincasa hispida])

HSP 1 Score: 340 bits (872), Expect = 9.13e-117
Identity = 180/206 (87.38%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKT----VVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKK 60
           M+AKS EGKHNFKDKT    +VDDD EYET EEEVGG G GGSN  AC ALGYF+NEKKK
Sbjct: 1   MEAKSIEGKHNFKDKTCREGMVDDDLEYET-EEEVGGAGHGGSN--ACTALGYFENEKKK 60

Query: 61  RGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRF 120
           RGAAVSGRG+SGG VS PSCQAHNCA DLSEAKRYHRRHKVCE HSKAA+VMVAGIRQRF
Sbjct: 61  RGAAVSGRGRSGGCVSSPSCQAHNCATDLSEAKRYHRRHKVCELHSKAAVVMVAGIRQRF 120

Query: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCR 180
           CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAE QGESTSRKGS PQ  SKESHCR
Sbjct: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGSTPQ--SKESHCR 180

Query: 181 QLVEDQRSRIQMAPPGSSGYKHLHIR 202
           QLVEDQRSRIQ+APPGSSGYKHLHIR
Sbjct: 181 QLVEDQRSRIQIAPPGSSGYKHLHIR 201

[Close]

BLAST of CsGy4G021720 vs. NCBI nr
Match: XP_016903072.1 (PREDICTED: squamosa promoter-binding protein 1-like [Cucumis melo])

HSP 1 Score: 336 bits (862), Expect = 1.68e-115
Identity = 178/202 (88.12%), Postives = 182/202 (90.10%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           MDAKSFEGKHN KDKTVVDDDFEYETEEEEVGGGGG                 +K++GAA
Sbjct: 1   MDAKSFEGKHNSKDKTVVDDDFEYETEEEEVGGGGG-----------------EKEKGAA 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
           VSGRGKSGGSVS PSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC
Sbjct: 61  VSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180
           SRFHELTEFDEAKRSCRRRLAGHNERRRK+SAESQGESTSRK SAPQAQSKESHCRQLVE
Sbjct: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRK-SAPQAQSKESHCRQLVE 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 202
           DQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPPGSSGYKHLHIR 184

[Close]

BLAST of CsGy4G021720 vs. NCBI nr
Match: XP_022937043.1 (squamosa promoter-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 333 bits (853), Expect = 7.43e-114
Identity = 171/206 (83.01%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKT----VVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKK 60
           M+AKS+EGKHN KDK     V+DDD EYETEEE+VGGGG GG+N  AC ALGY++NEKKK
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTN--ACTALGYYENEKKK 60

Query: 61  RGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRF 120
           RG +VSGRG+SG  VS PSCQAHNC  DLSEAKRYHRRHKVCEFHSKAA+VMVAGIRQRF
Sbjct: 61  RGTSVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRF 120

Query: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCR 180
           CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAE QGEST+RKGSA  +QSKE HCR
Sbjct: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSA--SQSKEGHCR 180

Query: 181 QLVEDQRSRIQMAPPGSSGYKHLHIR 202
           QL+EDQRSRIQMAP GSSGYKHLHIR
Sbjct: 181 QLMEDQRSRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of CsGy4G021720 vs. ExPASy TrEMBL
Match: A0A0A0L3D9 (Squamosa promoter-binding protein OS=Cucumis sativus OX=3659 GN=Csa_4G631590 PE=4 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 1.08e-140
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA
Sbjct: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
           VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC
Sbjct: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180
           SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE
Sbjct: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 202
           DQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPPGSSGYKHLHIR 202

[Close]

BLAST of CsGy4G021720 vs. ExPASy TrEMBL
Match: A0A5D3DWS3 (Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001760 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 2.44e-132
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           MDAKSFEGKHN KDKTVVDDDFEYETEEEEVGGGGGG SNSNACNALGYFDNEK+KRGAA
Sbjct: 1   MDAKSFEGKHNSKDKTVVDDDFEYETEEEEVGGGGGG-SNSNACNALGYFDNEKRKRGAA 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
           VSGRGKSGGSVS PSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC
Sbjct: 61  VSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180
           SRFHELTEFDEAKRSCRRRLAGHNERRRK+SAESQGESTSRK SAPQAQSKESHCRQLVE
Sbjct: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRK-SAPQAQSKESHCRQLVE 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 202
           DQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPPGSSGYKHLHIR 200

[Close]

BLAST of CsGy4G021720 vs. ExPASy TrEMBL
Match: A0A1S4E4C7 (squamosa promoter-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501851 PE=4 SV=1)

HSP 1 Score: 336 bits (862), Expect = 8.13e-116
Identity = 178/202 (88.12%), Postives = 182/202 (90.10%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           MDAKSFEGKHN KDKTVVDDDFEYETEEEEVGGGGG                 +K++GAA
Sbjct: 1   MDAKSFEGKHNSKDKTVVDDDFEYETEEEEVGGGGG-----------------EKEKGAA 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
           VSGRGKSGGSVS PSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC
Sbjct: 61  VSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180
           SRFHELTEFDEAKRSCRRRLAGHNERRRK+SAESQGESTSRK SAPQAQSKESHCRQLVE
Sbjct: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRK-SAPQAQSKESHCRQLVE 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 202
           DQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPPGSSGYKHLHIR 184

[Close]

BLAST of CsGy4G021720 vs. ExPASy TrEMBL
Match: A0A6J1FEY0 (squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443461 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 3.60e-114
Identity = 171/206 (83.01%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKT----VVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKK 60
           M+AKS+EGKHN KDK     V+DDD EYETEEE+VGGGG GG+N  AC ALGY++NEKKK
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTN--ACTALGYYENEKKK 60

Query: 61  RGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRF 120
           RG +VSGRG+SG  VS PSCQAHNC  DLSEAKRYHRRHKVCEFHSKAA+VMVAGIRQRF
Sbjct: 61  RGTSVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRF 120

Query: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCR 180
           CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAE QGEST+RKGSA  +QSKE HCR
Sbjct: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSA--SQSKEGHCR 180

Query: 181 QLVEDQRSRIQMAPPGSSGYKHLHIR 202
           QL+EDQRSRIQMAP GSSGYKHLHIR
Sbjct: 181 QLMEDQRSRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of CsGy4G021720 vs. ExPASy TrEMBL
Match: A0A6J1IJV6 (squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476934 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 6.94e-112
Identity = 169/206 (82.04%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKT----VVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKK 60
           M+AKS+EGKHN KDK     VVDDD EYETEEE+VGGGG GG+N  AC ALGY++NEKKK
Sbjct: 1   MEAKSYEGKHNLKDKAYREGVVDDDLEYETEEEDVGGGGHGGTN--ACTALGYYENEKKK 60

Query: 61  RGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRF 120
           RG AVSGRG+SG  VS PSCQAHNC  DLSEAKRYHRRHKVCEFHSKAA+VMVAGIRQRF
Sbjct: 61  RGTAVSGRGRSGVGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRF 120

Query: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCR 180
           CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRK+SAE QGEST+RKG  P +QSKE  CR
Sbjct: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAECQGESTNRKG--PASQSKEGQCR 180

Query: 181 QLVEDQRSRIQMAPPGSSGYKHLHIR 202
           QL+EDQR+RIQMAP GSSGYKHLHIR
Sbjct: 181 QLMEDQRTRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of CsGy4G021720 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-34
Identity = 94/205 (45.85%), Postives = 121/205 (59.02%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKT-VVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGA 60
           M+ K  +G+   K K+ +V++D E +T+EEE  G                 D  +  RG+
Sbjct: 1   MEGKRSQGQGYMKKKSYLVEEDMETDTDEEEEVGR----------------DRVRGSRGS 60

Query: 61  AVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQ 120
                   GGS+ L  CQ   C AD+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQQ
Sbjct: 61  I-----NRGGSLRL--CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQ 120

Query: 121 CSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAES-QGESTSRKGSAPQAQSKESHCRQL 180
           CSRFH+L EFDEAKRSCRRRLAGHNERRRKSS ES  GE + R+G   Q          +
Sbjct: 121 CSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV--------VM 174

Query: 181 VEDQRSRIQMA-PPGSSGYKHLHIR 203
              +RSR++M  P  +S +K   IR
Sbjct: 181 QNQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of CsGy4G021720 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-34
Identity = 94/205 (45.85%), Postives = 121/205 (59.02%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKT-VVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGA 60
           M+ K  +G+   K K+ +V++D E +T+EEE  G                 D  +  RG+
Sbjct: 1   MEGKRSQGQGYMKKKSYLVEEDMETDTDEEEEVGR----------------DRVRGSRGS 60

Query: 61  AVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQ 120
                   GGS+ L  CQ   C AD+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQQ
Sbjct: 61  I-----NRGGSLRL--CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQ 120

Query: 121 CSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAES-QGESTSRKGSAPQAQSKESHCRQL 180
           CSRFH+L EFDEAKRSCRRRLAGHNERRRKSS ES  GE + R+G   Q          +
Sbjct: 121 CSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV--------VM 174

Query: 181 VEDQRSRIQMA-PPGSSGYKHLHIR 203
              +RSR++M  P  +S +K   IR
Sbjct: 181 QNQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of CsGy4G021720 vs. TAIR 10
Match: AT3G15270.1 (squamosa promoter binding protein-like 5 )

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31
Identity = 87/203 (42.86%), Postives = 114/203 (56.16%), Query Frame = 0


Query: 1   MDAKSFEGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAA 60
           M+ +  + +   KDK  V +  E E E    G    GG             +E K++   
Sbjct: 1   MEGQRTQRRGYLKDKATVSNLVEEEMENGMDGEEEDGG-------------DEDKRKKVM 60

Query: 61  VSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQC 120
              RG S   V    CQ   C  +L+EAK+Y+RRH+VCE H+KA+   VAG+RQRFCQQC
Sbjct: 61  ERVRGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQC 120

Query: 121 SRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCRQLVE 180
           SRFHEL EFDEAKRSCRRRLAGHNERRRK S +S GE + R+G + Q          +  
Sbjct: 121 SRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRRGFSGQL---------IQT 180

Query: 181 DQRSRI-QMAPPGSSGYKHLHIR 203
            +R+R+ +  P  +S +K   IR
Sbjct: 181 QERNRVDRKLPMTNSSFKRPQIR 181

[Close]

BLAST of CsGy4G021720 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 73/147 (49.66%), Postives = 97/147 (65.99%), Query Frame = 0


Query: 7   EGKHNFKDKTVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKKRGAAVSGRGK 66
           EGK + ++ +  +++ E ETE+E+               AL     EKK++G A S  G 
Sbjct: 9   EGKRSLRELSEEEEE-EEETEDED---------TFEEEEAL-----EKKQKGKATSSSG- 68

Query: 67  SGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHEL 126
                    CQ  +C AD+S+AK+YH+RHKVC+FH+KA  V ++G+ QRFCQQCSRFH L
Sbjct: 69  --------VCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHAL 128

Query: 127 TEFDEAKRSCRRRLAGHNERRRKSSAE 154
           +EFDEAKRSCRRRLAGHNERRRKS+ +
Sbjct: 129 SEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]

BLAST of CsGy4G021720 vs. TAIR 10
Match: AT2G47070.1 (squamosa promoter binding protein-like 1 )

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29
Identity = 71/132 (53.79%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 38  GSNSNACNALGYFDNEKKKRGAAVSG----------RGKSGG------SVSLPSCQAHNC 97
           G++SN+ ++     N+KK+R  A+ G           G+S G      + S   CQ  NC
Sbjct: 52  GNSSNSSSSCSDEGNDKKRRAVAIQGDTNGALTLNLNGESDGLFPAKKTKSGAVCQVENC 111

Query: 98  AADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRLA 154
            ADLS+ K YHRRHKVCE HSKA    V GI QRFCQQCSRFH L EFDE KRSCRRRLA
Sbjct: 112 EADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRSCRRRLA 171

The following BLAST results are available for this feature:

BLAST of CsGy4G021720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6Z461	2.8e-34	55.03	Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9S7A9	5.2e-33	45.85	Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4...	[more]
Q38741	6.4e-31	50.65	Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV...	[more]
Q9S758	1.9e-30	42.86	Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5...	[more]
P93015	1.7e-28	49.66	Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3...	[more]

BLAST of CsGy4G021720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146058.1	2.23e-140	100.00	squamosa promoter-binding protein 1 [Cucumis sativus] >KGN55117.1 hypothetical p...	[more]
KAA0066825.1	5.05e-132	97.03	squamosa promoter-binding protein 1 [Cucumis melo var. makuwa] >TYK27972.1 squam...	[more]
XP_038898687.1	9.13e-117	87.38	squamosa promoter-binding-like protein 3 [Benincasa hispida]	[more]
XP_016903072.1	1.68e-115	88.12	PREDICTED: squamosa promoter-binding protein 1-like [Cucumis melo]	[more]
XP_022937043.1	7.43e-114	83.01	squamosa promoter-binding protein 1-like [Cucurbita moschata]	[more]

BLAST of CsGy4G021720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3D9	1.08e-140	100.00	Squamosa promoter-binding protein OS=Cucumis sativus OX=3659 GN=Csa_4G631590 PE=...	[more]
A0A5D3DWS3	2.44e-132	97.03	Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S4E4C7	8.13e-116	88.12	squamosa promoter-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501851...	[more]
A0A6J1FEY0	3.60e-114	83.01	squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IJV6	6.94e-112	82.04	squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]

BLAST of CsGy4G021720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53160.2	3.7e-34	45.85	squamosa promoter binding protein-like 4	[more]
AT1G53160.1	3.7e-34	45.85	squamosa promoter binding protein-like 4	[more]
AT3G15270.1	1.3e-31	42.86	squamosa promoter binding protein-like 5	[more]
AT2G33810.1	1.2e-29	49.66	squamosa promoter binding protein-like 3	[more]
AT2G47070.1	2.7e-29	53.79	squamosa promoter binding protein-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 71..137 e-value: 1.7E-32 score: 113.4
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 74..154
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 76..149 e-value: 2.1E-31 score: 108.0
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 73..150 score: 32.196964
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 66..151 e-value: 3.3E-46 score: 153.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..202
None	No IPR available	PANTHER	PTHR31251:SF149	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN	coord: 11..202
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 11..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G021720.2	CsGy4G021720.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding