CsGy4G021670 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G021670
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	PRA1 family protein
Location	Gy14Chr4: 28266517 .. 28269800 (+)
RNA-Seq Expression	CsGy4G021670
Synteny	CsGy4G021670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATAAAGAGAACACTGAGTTAGTCTTTGTCTTGTGATGCTTCATTAATACTAACACTTCTCTATGTCAGTCGTCTAGTTCTATATTGCAATGGAATAAAGAAAAAAAACTTTTTTGGGTCAAAAGAACCCAATTTCCCGGAGTCCGGGGCCCGCCGGGATCGTTAACGGTGGCGTTGATGATTTGATTGGCGAGAAGGAGGATAAAGCGATGTACCCACCTTCACCTCTACAACAAAACAAACGCAACAATCTCAAATCAACAATCTTCAACCACAAGGCAATTACATTCAGCCTTTTTATATAACCCTTTTGTCTCTTTTGATTCTGAATTCGTTTTTGTTGTGTTGTGGCGATTAGGAATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCGGACGCCGCTTTCGATTCATGGCTTCGTGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCGCTCCCCCCGCCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTTAACCCCTTTGCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACCCCTTCCTGGACTACTGGGTTTCTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTATGTTCTTCTCTTTCTCCTGTTAATTATGTCTATTGATGGGCTGTGTGCTGCGGATTCTGGTCTTGACGTTGAAATTGTTGTCTTTCCTGTGGGTTGCGAATTGGGTTCTGTTTGGTTTTACTTGGTGGGAATGGGAAGAGTACAAGTACAAGCTATGAAAACATCGATTTGTTAAAGCGTTTTGATTAAGATATGATCATGGGTTTAGTGATTTGGTTTGATTTTTTAAGCTCGTGGGGCTTAAGACTTTTGCAGCCTAATCGATTGCTGATCCCAATGTGAAACATATAGAAAGAATGGCTTGCATTCTTTTTGTGGATTTTAGTGGTTTGACTGAACAGGGAACCACTGTCACTGTTGTTGGTCATTAAACTAGAACACCACTCTATTACTAGTTTATATATTCATGTTCCTTTCTTTGGGATGAATGAGCGTTTGCATGGAGTGAACATAAAAAATGTTGGCTAGAGATTTATGACCTTTATTTTACCAATTTCTTGTTTCTTAACTTTAAATTCTCATGTGGATGATTGCAGATACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGACATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGCGGTATGTTACTGACGTTTTAAAACCGTGTTTATTTACATACCTGAGAGGTTCCTCCCAATTGTTTCCTTTAAACATGTATTAATTAATTGGTATTCTGTTTCATTGTTGCATTTTCACATAGAGAATTTCAGTTGAAAATAGATATCCGTAGAGATACAGATTACTATAGTATAGATCATCAGTATAGATGTAGAGTTTAGATCTCAAATTGAAAGCATACCAAGATTACTAGTTACTGCTTGTTGAATGGTTATTGTTTTGCCTGTTCCTTTTGGTTAAAGATTTCAAGCCTCAAGGCTATTGTTTTCTCAATTTGAGATGACCATCGATTGAAAACTTTAGCACAGTTGTTCCTTAGTTCTTGAAATGGAGCCAAGCTAATGAGTTGGCCAAATGTGTAGCAAAGCATAATTTCTGCCTGTTTGATGCTGGAAAAGTTTTACTTTGTACTTCAAATGGCATTTGGAATCCTTGGAATTTTTTCAAAACCCTTCTTTTTGATACAGCTTTGTGGGATTGTTGGACTTTAAAATTCGGATCCTGCTGTAGTGCTGTATGCTTTTATTCGTTGTTTTCATGTAAATTACCATCCGTGAGTTCACAATTGTTCGGACTGCTATTGTTATTTAATTACGTAGCATCTTAAATACTTGACAAGTATAATGTTTTGCAGCGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTAACTTCAGAATTCTAGGCCATGTTATAGAGTTCATTATTATCAGTTGTTCTTATCACCTTTGAAATCTTGGCAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCACATCTACCGTAAGTCGGAAATAGACAGTTACAGGCAATGGTATTTGTCCTCCTATATATAAGTTAAGCCTAATGCAAGGTACCAACATCTGATTCTGTTGAAGACGAAAAGTTCTAGTAATGCTGATCGCAAACTTGAAAGCATGACTGATGTACGTCAGCAGGCACCGTGCCCTTGCTTGAAAATTCATATTACGGTGTGGGGCACGGTGACCATCGTATTGCCCAAGAGTTTCATCTTCCTCTGTTAAAGGCTAGAACCAAGAAACAAGTCAAGCTCAAATCTCGTTTAATTTGTTTGTTCATTAGTTAATGAAAATTAAGTATGGTTAATTTTGTAGGTCATAACACTACTACATGATATTTAGTTCCAGCTTATGACTTGTACCACAAATGTAGCATTTTGTGCTTACTTTTCTATGAACGAGAGTTTATCAGATTTCAGGTGAAGTACAGAAAGCTCTAATTTTTCTTGTCTAACAATAAGAAGCCTGCATCTCAATCCTTATACTTTCGATAAATGATGTAATTGAAAACATCAGTTTCTGTTCAGTTATGCACCTTTTTATTAAAGATGGCTTAAGGTTAAGCAAGAAGGATTTGCTACACTAAGTTTCTCATTCCCAATACCGCTTGAGATAAAATGTCAAAGATGCAAGTGGTATATCAAGTCATCATCGTTCATGGTTTATAAATTAATTATTGGTACTTTACAACATGATATTGATGACACTGGATAACAGTAGTAGAAAATTGATTTTAGCTTAATTTTGTTTAACAGCATTTAAGCTTATGTAATGGTAATAATAGTAGTAGAAAATGCGTCACACGATTTTAAGGTATAGATTCAATACTTCTTTCAAAGTTTATTATCGTTTCTCTTTTTAAAAAGATCTCAAGATTTATCTATCAAATGAAACCCATTCATTCAAGCTCATTTACCATCTA

mRNA sequence

ATTTTATAAAGAGAACACTGAGTTAGTCTTTGTCTTGTGATGCTTCATTAATACTAACACTTCTCTATGTCAGTCGTCTAGTTCTATATTGCAATGGAATAAAGAAAAAAAACTTTTTTGGGTCAAAAGAACCCAATTTCCCGGAGTCCGGGGCCCGCCGGGATCGTTAACGGTGGCGTTGATGATTTGATTGGCGAGAAGGAGGATAAAGCGATGTACCCACCTTCACCTCTACAACAAAACAAACGCAACAATCTCAAATCAACAATCTTCAACCACAAGGAATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCGGACGCCGCTTTCGATTCATGGCTTCGTGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCGCTCCCCCCGCCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTTAACCCCTTTGCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACCCCTTCCTGGACTACTGGGTTTCTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTATACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGACATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGCGCGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCACATCTACCGTAAGTCGGAAATAGACAGTTACAGGCAATGGTATTTGTCCTCCTATATATAAGTTAAGCCTAATGCAAGGTACCAACATCTGATTCTGTTGAAGACGAAAAGTTCTAGTAATGCTGATCGCAAACTTGAAAGCATGACTGATGTACGTCAGCAGGCACCGTGCCCTTGCTTGAAAATTCATATTACGGTGTGGGGCACGGTGACCATCGTATTGCCCAAGAGTTTCATCTTCCTCTGTTAAAGGCTAGAACCAAGAAACAAGTCAAGCTCAAATCTCGTTTAATTTGTTTGTTCATTAGTTAATGAAAATTAAGTATGGTTAATTTTGTAGGTCATAACACTACTACATGATATTTAGTTCCAGCTTATGACTTGTACCACAAATGTAGCATTTTGTGCTTACTTTTCTATGAACGAGAGTTTATCAGATTTCAGGTGAAGTACAGAAAGCTCTAATTTTTCTTGTCTAACAATAAGAAGCCTGCATCTCAATCCTTATACTTTCGATAAATGATGTAATTGAAAACATCAGTTTCTGTTCAGTTATGCACCTTTTTATTAAAGATGGCTTAAGGTTAAGCAAGAAGGATTTGCTACACTAAGTTTCTCATTCCCAATACCGCTTGAGATAAAATGTCAAAGATGCAAGTGGTATATCAAGTCATCATCGTTCATGGTTTATAAATTAATTATTGGTACTTTACAACATGATATTGATGACACTGGATAACAGTAGTAGAAAATTGATTTTAGCTTAATTTTGTTTAACAGCATTTAAGCTTATGTAATGGTAATAATAGTAGTAGAAAATGCGTCACACGATTTTAAGGTATAGATTCAATACTTCTTTCAAAGTTTATTATCGTTTCTCTTTTTAAAAAGATCTCAAGATTTATCTATCAAATGAAACCCATTCATTCAAGCTCATTTACCATCTA

Coding sequence (CDS)

ATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCGGACGCCGCTTTCGATTCATGGCTTCGTGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCGCTCCCCCCGCCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTTAACCCCTTTGCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACCCCTTCCTGGACTACTGGGTTTCTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTATACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGACATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGCGCGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCACATCTACCGTAAGTCGGAAATAG

Protein sequence

MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK*

Homology

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BLAST of CsGy4G021670 vs. ExPASy Swiss-Prot
Match: Q8LFP1 (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-70
Identity = 136/235 (57.87%), Postives = 171/235 (72.77%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRT--------SDLHRHSSAAPPARPTPT 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RT        S     SSAA  +  +  
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  AAAPLATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSS 120
             + +  GFF SL SR+ T+ S+ T+NPF+KLSA DFSG T  WTTGF+G  +SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTK 228
           D++P + +  + I QCAT ++L F N QMA+F AL I Y+ MILHA FRKLTP+K
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSK 235

[Close]

BLAST of CsGy4G021670 vs. NCBI nr
Match: XP_004146052.1 (PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PRA1 family protein H [Cucumis sativus] >KGN55111.1 hypothetical protein Csa_012113 [Cucumis sativus])

HSP 1 Score: 467 bits (1201), Expect = 8.29e-166
Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGF+GFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
           CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235

[Close]

BLAST of CsGy4G021670 vs. NCBI nr
Match: XP_008463685.1 (PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 family protein H [Cucumis melo])

HSP 1 Score: 458 bits (1178), Expect = 2.66e-162
Identity = 227/235 (96.60%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GF+GFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
           CLVRIAQCAT IILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKP ST+SRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235

[Close]

BLAST of CsGy4G021670 vs. NCBI nr
Match: KAA0066819.1 (PRA1 family protein H [Cucumis melo var. makuwa] >TYK27966.1 PRA1 family protein H [Cucumis melo var. makuwa])

HSP 1 Score: 439 bits (1130), Expect = 2.10e-154
Identity = 227/272 (83.46%), Postives = 232/272 (85.29%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GF+GFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLY------------------------------------ 180
           HENAKRYARNYASLFVLFFVCTLY                                    
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYVLLFLLLIVSIDGLFAADSGLTLKLLYFLEVVNWVL 180

Query: 181 -QMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATVIILLFSNFQMAI 235
            QMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCAT IILLFSNFQMAI
Sbjct: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI 240

[Close]

BLAST of CsGy4G021670 vs. NCBI nr
Match: XP_038898448.1 (PRA1 family protein H [Benincasa hispida])

HSP 1 Score: 431 bits (1108), Expect = 1.39e-151
Identity = 219/238 (92.02%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA---APPARPTPTAAAPL 60
           MSFS NPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA   A P RPTP AAAPL
Sbjct: 1   MSFSPNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAPAAAAPTRPTPAAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQAR 120
           ATGFFISLFSR+ TLLSIFTLNPFAKLSAADFSGPTPSWT+GF+GFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRMGTLLSIFTLNPFAKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWD+VKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
           LWQCLVRIAQC TVIILLF NFQMAIFCALGIGYTGMILHAAFRKLT TKP + VSRK
Sbjct: 181 LWQCLVRIAQCVTVIILLFCNFQMAIFCALGIGYTGMILHAAFRKLTLTKPPAAVSRK 238

[Close]

BLAST of CsGy4G021670 vs. NCBI nr
Match: KAG6591944.1 (PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024817.1 PRA1 family protein H [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428 bits (1101), Expect = 1.62e-150
Identity = 214/238 (89.92%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA---APPARPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA   A P RPTP A APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSAADF+GPTPSWT+GF+GFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
           +WQCLVRIAQC TVIILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+P S+++RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]

BLAST of CsGy4G021670 vs. ExPASy TrEMBL
Match: A0A0A0L4P4 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 4.01e-166
Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGF+GFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
           CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235

[Close]

BLAST of CsGy4G021670 vs. ExPASy TrEMBL
Match: A0A1S3CLE4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)

HSP 1 Score: 458 bits (1178), Expect = 1.29e-162
Identity = 227/235 (96.60%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GF+GFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
           CLVRIAQCAT IILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKP ST+SRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235

[Close]

BLAST of CsGy4G021670 vs. ExPASy TrEMBL
Match: A0A5A7VNH6 (PRA1 family protein H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001700 PE=3 SV=1)

HSP 1 Score: 439 bits (1130), Expect = 1.02e-154
Identity = 227/272 (83.46%), Postives = 232/272 (85.29%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GF+GFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLY------------------------------------ 180
           HENAKRYARNYASLFVLFFVCTLY                                    
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYVLLFLLLIVSIDGLFAADSGLTLKLLYFLEVVNWVL 180

Query: 181 -QMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATVIILLFSNFQMAI 235
            QMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCAT IILLFSNFQMAI
Sbjct: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI 240

[Close]

BLAST of CsGy4G021670 vs. ExPASy TrEMBL
Match: A0A6J1IMK5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 3.20e-150
Identity = 213/238 (89.50%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAP---PARPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA     P RPTPTA APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSAADF+GPTPSWT+GF+GFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRW LDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYPV 180

Query: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
           +WQCLVRIAQC TVIILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+P S+++RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]

BLAST of CsGy4G021670 vs. ExPASy TrEMBL
Match: A0A6J1F5I6 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 1.30e-149
Identity = 212/238 (89.08%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAP---PARPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA     P RPTP A APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSAADF+GPTPSWT+GF+GFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRWGLD+YPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYPV 180

Query: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
           +WQCLVRIAQC TVIILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+P S+++RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]

BLAST of CsGy4G021670 vs. TAIR 10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H )

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-71
Identity = 136/235 (57.87%), Postives = 171/235 (72.77%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRT--------SDLHRHSSAAPPARPTPT 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RT        S     SSAA  +  +  
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  AAAPLATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSS 120
             + +  GFF SL SR+ T+ S+ T+NPF+KLSA DFSG T  WTTGF+G  +SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTK 228
           D++P + +  + I QCAT ++L F N QMA+F AL I Y+ MILHA FRKLTP+K
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSK 235

The following BLAST results are available for this feature:

BLAST of CsGy4G021670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFP1	1.6e-70	57.87	PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1	[more]

BLAST of CsGy4G021670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146052.1	8.29e-166	99.57	PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PRA1 family protein H [C...	[more]
XP_008463685.1	2.66e-162	96.60	PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 ...	[more]
KAA0066819.1	2.10e-154	83.46	PRA1 family protein H [Cucumis melo var. makuwa] >TYK27966.1 PRA1 family protein...	[more]
XP_038898448.1	1.39e-151	92.02	PRA1 family protein H [Benincasa hispida]	[more]
KAG6591944.1	1.62e-150	89.92	PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG70248...	[more]

BLAST of CsGy4G021670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4P4	4.01e-166	99.57	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1	[more]
A0A1S3CLE4	1.29e-162	96.60	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1	[more]
A0A5A7VNH6	1.02e-154	83.46	PRA1 family protein H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38...	[more]
A0A6J1IMK5	3.20e-150	89.50	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1	[more]
A0A6J1F5I6	1.30e-149	89.08	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1	[more]

BLAST of CsGy4G021670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27540.1	1.2e-71	57.87	prenylated RAB acceptor 1.H	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 103..222 e-value: 5.9E-15 score: 55.2
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..229
None	No IPR available	PANTHER	PTHR19317:SF1	PRA1 FAMILY PROTEIN H	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G021670.1	CsGy4G021670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane