Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTCCTTAACTCCACTCTTCTAATTTCCCTCCTCTTTGCTCTCTTCTCTCCGGCGAAACCCGACGCCGCCTACATCCAAAACCTCTGCGGCAAAACAGAGCAACCGAAGATTTGTTCCGACTGCCTCAATTCCGGCCAGGGAAGTCAGAGCGCCATCGGCCGTGGACTGGCACTCATCGCCGTCGAATGTGCGGAGAGAAATACCAAATTAATGGCGCAGAGGGTTGGAAACCTTGTTCGTTCGACGCCGGAGTCAACATTGAAGACGCTTTTGAATGAATGTTGGATGTCGACGGGGTATGCCGCGGGTAATTTTCCGGGAATTGCAAGATCCGTGGCGGCGGGAGACTATGGGGGCGGGAAGAGCGTTTTGGAGATTACTATTAGGAATGTGAATATGTGCATGGATAATTTCAAGAAAAATCCTAGCATTCTGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGTCACTCAAGATTGCCGGATTGTTACTCAGATTTTGAATAATATTTAA
mRNA sequence
ATGAATCTCCTTAACTCCACTCTTCTAATTTCCCTCCTCTTTGCTCTCTTCTCTCCGGCGAAACCCGACGCCGCCTACATCCAAAACCTCTGCGGCAAAACAGAGCAACCGAAGATTTGTTCCGACTGCCTCAATTCCGGCCAGGGAAGTCAGAGCGCCATCGGCCGTGGACTGGCACTCATCGCCGTCGAATGTGCGGAGAGAAATACCAAATTAATGGCGCAGAGGGTTGGAAACCTTGTTCGTTCGACGCCGGAGTCAACATTGAAGACGCTTTTGAATGAATGTTGGATGTCGACGGGGTATGCCGCGGGTAATTTTCCGGGAATTGCAAGATCCGTGGCGGCGGGAGACTATGGGGGCGGGAAGAGCGTTTTGGAGATTACTATTAGGAATGTGAATATGTGCATGGATAATTTCAAGAAAAATCCTAGCATTCTGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGTCACTCAAGATTGCCGGATTGTTACTCAGATTTTGAATAATATTTAA
Coding sequence (CDS)
ATGAATCTCCTTAACTCCACTCTTCTAATTTCCCTCCTCTTTGCTCTCTTCTCTCCGGCGAAACCCGACGCCGCCTACATCCAAAACCTCTGCGGCAAAACAGAGCAACCGAAGATTTGTTCCGACTGCCTCAATTCCGGCCAGGGAAGTCAGAGCGCCATCGGCCGTGGACTGGCACTCATCGCCGTCGAATGTGCGGAGAGAAATACCAAATTAATGGCGCAGAGGGTTGGAAACCTTGTTCGTTCGACGCCGGAGTCAACATTGAAGACGCTTTTGAATGAATGTTGGATGTCGACGGGGTATGCCGCGGGTAATTTTCCGGGAATTGCAAGATCCGTGGCGGCGGGAGACTATGGGGGCGGGAAGAGCGTTTTGGAGATTACTATTAGGAATGTGAATATGTGCATGGATAATTTCAAGAAAAATCCTAGCATTCTGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGTCACTCAAGATTGCCGGATTGTTACTCAGATTTTGAATAATATTTAA
Protein sequence
MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLALIAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYGGGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI*
Homology
BLAST of CsGy4G021550 vs. NCBI nr
Match:
XP_011654411.1 (pectinesterase inhibitor [Cucumis sativus] >KGN55098.1 hypothetical protein Csa_012087 [Cucumis sativus])
HSP 1 Score: 341 bits (874), Expect = 5.23e-118
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 1 MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL
Sbjct: 1 MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
Query: 61 IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG
Sbjct: 61 IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of CsGy4G021550 vs. NCBI nr
Match:
XP_008463801.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >KAA0066803.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa] >TYK27950.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa])
HSP 1 Score: 310 bits (795), Expect = 5.81e-106
Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0
Query: 1 MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
MNLLNS LLISLLFALFSPAKPDAAYI NLC KTEQPKICSDCLNSG+GSQSA GRGLAL
Sbjct: 1 MNLLNSILLISLLFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGRGLAL 60
Query: 61 IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
IAV CAERNTKLMAQRVGNLVRSTPESTLK LLNECWMSTGYAAGNFPGIARSVAAGDY
Sbjct: 61 IAVGCAERNTKLMAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAAGDYA 120
Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
GK+VLEITIRNVNMC+ NFKKNP+I VPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 SGKNVLEITIRNVNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of CsGy4G021550 vs. NCBI nr
Match:
XP_038896712.1 (pectinesterase inhibitor-like [Benincasa hispida])
HSP 1 Score: 277 bits (709), Expect = 7.43e-93
Identity = 138/173 (79.77%), Postives = 154/173 (89.02%), Query Frame = 0
Query: 1 MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
MNLL+S L I +LFALFSPAKPDAA I NLC KTEQPKICSDCLNSG GSQ+A G GLAL
Sbjct: 1 MNLLSSILPIIVLFALFSPAKPDAALIANLCCKTEQPKICSDCLNSGSGSQTADGLGLAL 60
Query: 61 IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
IA+ CAE+NTKLMAQR+G LVRSTP+STLKTLLN+CW+STG AAGNFPGIARSVAAGDY
Sbjct: 61 IAIGCAEKNTKLMAQRLGGLVRSTPDSTLKTLLNDCWLSTGSAAGNFPGIARSVAAGDYA 120
Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
GG++VLEITIRN N C+DNF KNPS+ VPSEVLAGTVA QDCRI+++ILNNI
Sbjct: 121 GGRNVLEITIRNANSCLDNFNKNPSVPVPSEVLAGTVAAAQDCRIISEILNNI 173
BLAST of CsGy4G021550 vs. NCBI nr
Match:
XP_022940751.1 (uncharacterized protein LOC111446254 [Cucurbita moschata] >KAG7037425.1 hypothetical protein SDJN02_01051, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 228 bits (580), Expect = 3.50e-73
Identity = 117/175 (66.86%), Postives = 136/175 (77.71%), Query Frame = 0
Query: 1 MNLLNSTLLISLL--FALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGL 60
MN NS L + LL FALFSPAKPDAA I+NLCG+TEQP ICS CLNS S++A GRGL
Sbjct: 1 MNPFNSMLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGL 60
Query: 61 ALIAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGD 120
A+IAV CAERNT+ MAQR+G++ R TP S +KTLLN+CW STGYAAGNFPGI +V GD
Sbjct: 61 AVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGD 120
Query: 121 YGGGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
Y ++ +EI+IRNVN C+ F KNPS+ VPSEVLAGTVA Q CRIV ILNNI
Sbjct: 121 YARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of CsGy4G021550 vs. NCBI nr
Match:
KAG6607897.1 (hypothetical protein SDJN03_01239, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 226 bits (576), Expect = 1.16e-72
Identity = 111/161 (68.94%), Postives = 129/161 (80.12%), Query Frame = 0
Query: 13 LFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLALIAVECAERNTKL 72
LFALFSPAKPDAA I+NLCG+TEQP ICS CLNS S++A GRGLA+IAV CAERNT+
Sbjct: 9 LFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVGCAERNTRA 68
Query: 73 MAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYGGGKSVLEITIRN 132
MAQR+G++ R TP S +KTLLN+CW STGYAAGNFPGI +V GDY ++ +EI+IRN
Sbjct: 69 MAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARNGVEISIRN 128
Query: 133 VNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
VN C+ F KNPS+ VPSEVLAGTVA Q CRIV ILNNI
Sbjct: 129 VNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
BLAST of CsGy4G021550 vs. ExPASy TrEMBL
Match:
A0A0A0L044 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628950 PE=4 SV=1)
HSP 1 Score: 341 bits (874), Expect = 2.53e-118
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 1 MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL
Sbjct: 1 MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
Query: 61 IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG
Sbjct: 61 IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of CsGy4G021550 vs. ExPASy TrEMBL
Match:
A0A5D3DXI0 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001540 PE=4 SV=1)
HSP 1 Score: 310 bits (795), Expect = 2.81e-106
Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0
Query: 1 MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
MNLLNS LLISLLFALFSPAKPDAAYI NLC KTEQPKICSDCLNSG+GSQSA GRGLAL
Sbjct: 1 MNLLNSILLISLLFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGRGLAL 60
Query: 61 IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
IAV CAERNTKLMAQRVGNLVRSTPESTLK LLNECWMSTGYAAGNFPGIARSVAAGDY
Sbjct: 61 IAVGCAERNTKLMAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAAGDYA 120
Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
GK+VLEITIRNVNMC+ NFKKNP+I VPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 SGKNVLEITIRNVNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of CsGy4G021550 vs. ExPASy TrEMBL
Match:
A0A1S3CK48 (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103501854 PE=4 SV=1)
HSP 1 Score: 310 bits (795), Expect = 2.81e-106
Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0
Query: 1 MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
MNLLNS LLISLLFALFSPAKPDAAYI NLC KTEQPKICSDCLNSG+GSQSA GRGLAL
Sbjct: 1 MNLLNSILLISLLFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGRGLAL 60
Query: 61 IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
IAV CAERNTKLMAQRVGNLVRSTPESTLK LLNECWMSTGYAAGNFPGIARSVAAGDY
Sbjct: 61 IAVGCAERNTKLMAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAAGDYA 120
Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
GK+VLEITIRNVNMC+ NFKKNP+I VPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 SGKNVLEITIRNVNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of CsGy4G021550 vs. ExPASy TrEMBL
Match:
A0A6J1FJC0 (uncharacterized protein LOC111446254 OS=Cucurbita moschata OX=3662 GN=LOC111446254 PE=4 SV=1)
HSP 1 Score: 228 bits (580), Expect = 1.69e-73
Identity = 117/175 (66.86%), Postives = 136/175 (77.71%), Query Frame = 0
Query: 1 MNLLNSTLLISLL--FALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGL 60
MN NS L + LL FALFSPAKPDAA I+NLCG+TEQP ICS CLNS S++A GRGL
Sbjct: 1 MNPFNSMLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGL 60
Query: 61 ALIAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGD 120
A+IAV CAERNT+ MAQR+G++ R TP S +KTLLN+CW STGYAAGNFPGI +V GD
Sbjct: 61 AVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGD 120
Query: 121 YGGGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
Y ++ +EI+IRNVN C+ F KNPS+ VPSEVLAGTVA Q CRIV ILNNI
Sbjct: 121 YARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of CsGy4G021550 vs. ExPASy TrEMBL
Match:
A0A6J1J2U5 (uncharacterized protein LOC111480766 OS=Cucurbita maxima OX=3661 GN=LOC111480766 PE=4 SV=1)
HSP 1 Score: 224 bits (572), Expect = 2.79e-72
Identity = 116/175 (66.29%), Postives = 135/175 (77.14%), Query Frame = 0
Query: 1 MNLLNSTLLISLL--FALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGL 60
MN NS L + LL FA FSPAKPDAA I+NLCG+TEQP ICS CLNS S++A GRGL
Sbjct: 1 MNPFNSMLPLFLLSVFAPFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGL 60
Query: 61 ALIAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGD 120
A+IAV CAERNT+ MAQR+G++ R TP S +KTLLN+CW STGYAAGNFPGI +V GD
Sbjct: 61 AVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVEEGD 120
Query: 121 YGGGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
Y ++ +EI+IRNVN C+ F KNPS+ VPSEVLAGTVA Q CRIV ILNNI
Sbjct: 121 YARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_011654411.1 | 5.23e-118 | 100.00 | pectinesterase inhibitor [Cucumis sativus] >KGN55098.1 hypothetical protein Csa_... | [more] |
XP_008463801.1 | 5.81e-106 | 91.91 | PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >KAA0066803.1 pectineste... | [more] |
XP_038896712.1 | 7.43e-93 | 79.77 | pectinesterase inhibitor-like [Benincasa hispida] | [more] |
XP_022940751.1 | 3.50e-73 | 66.86 | uncharacterized protein LOC111446254 [Cucurbita moschata] >KAG7037425.1 hypothet... | [more] |
KAG6607897.1 | 1.16e-72 | 68.94 | hypothetical protein SDJN03_01239, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L044 | 2.53e-118 | 100.00 | PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628950 PE=4 S... | [more] |
A0A5D3DXI0 | 2.81e-106 | 91.91 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A1S3CK48 | 2.81e-106 | 91.91 | pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103501854 PE=4 SV=1 | [more] |
A0A6J1FJC0 | 1.69e-73 | 66.86 | uncharacterized protein LOC111446254 OS=Cucurbita moschata OX=3662 GN=LOC1114462... | [more] |
A0A6J1J2U5 | 2.79e-72 | 66.29 | uncharacterized protein LOC111480766 OS=Cucurbita maxima OX=3661 GN=LOC111480766... | [more] |
Match Name | E-value | Identity | Description | |