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CsGy4G021425 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAAGCCATTATTGTAATGATAAAGTTCTTCTTCGTTTGCTTTATTACTGTAATCATTTTGCTGCCATTTTTGAGCTTTGGATCAGCTCCTCCTCCTCCTCCTCCTCCTTCTTCTCCTCCAAGTGGCTTCATGGAAAGTGCTAAGGATGCATTAATGGCTAGTCTCCAAAGACAAGGTGGAAAGCCCTTTCAGGTGCAGCGAACCAGCCCTGGAGGACCCGATCAACACCATCATTAA ATGGCTAAAGCCATTATTGTAATGATAAAGTTCTTCTTCGTTTGCTTTATTACTGTAATCATTTTGCTGCCATTTTTGAGCTTTGGATCAGCTCCTCCTCCTCCTCCTCCTCCTTCTTCTCCTCCAAGTGGCTTCATGGAAAGTGCTAAGGATGCATTAATGGCTAGTCTCCAAAGACAAGGTGGAAAGCCCTTTCAGGTGCAGCGAACCAGCCCTGGAGGACCCGATCAACACCATCATTAA ATGGCTAAAGCCATTATTGTAATGATAAAGTTCTTCTTCGTTTGCTTTATTACTGTAATCATTTTGCTGCCATTTTTGAGCTTTGGATCAGCTCCTCCTCCTCCTCCTCCTCCTTCTTCTCCTCCAAGTGGCTTCATGGAAAGTGCTAAGGATGCATTAATGGCTAGTCTCCAAAGACAAGGTGGAAAGCCCTTTCAGGTGCAGCGAACCAGCCCTGGAGGACCCGATCAACACCATCATTAA MAKAIIVMIKFFFVCFITVIILLPFLSFGSAPPPPPPPSSPPSGFMESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH* Homology
BLAST of CsGy4G021425 vs. NCBI nr
Match: KGN55082.1 (hypothetical protein Csa_012608 [Cucumis sativus]) HSP 1 Score: 150 bits (378), Expect = 2.51e-45 Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of CsGy4G021425 vs. NCBI nr
Match: KAG6607905.1 (hypothetical protein SDJN03_01247, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 84.0 bits (206), Expect = 2.98e-19 Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of CsGy4G021425 vs. NCBI nr
Match: TQD72240.1 (hypothetical protein C1H46_042222 [Malus baccata]) HSP 1 Score: 54.3 bits (129), Expect = 1.68e-07 Identity = 32/65 (49.23%), Postives = 38/65 (58.46%), Query Frame = 0
BLAST of CsGy4G021425 vs. NCBI nr
Match: XP_021288729.1 (uncharacterized protein LOC110419919 [Herrania umbratica]) HSP 1 Score: 55.8 bits (133), Expect = 1.88e-07 Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
BLAST of CsGy4G021425 vs. NCBI nr
Match: KAE8703294.1 (putative Mitochondrial transcription termination factor family protein [Hibiscus syriacus]) HSP 1 Score: 55.1 bits (131), Expect = 2.80e-07 Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of CsGy4G021425 vs. ExPASy TrEMBL
Match: A0A0A0L3B3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G627810 PE=4 SV=1) HSP 1 Score: 150 bits (378), Expect = 1.21e-45 Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of CsGy4G021425 vs. ExPASy TrEMBL
Match: A0A540KDP1 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_042222 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.14e-08 Identity = 32/65 (49.23%), Postives = 38/65 (58.46%), Query Frame = 0
BLAST of CsGy4G021425 vs. ExPASy TrEMBL
Match: A0A6J1AQE4 (uncharacterized protein LOC110419919 OS=Herrania umbratica OX=108875 GN=LOC110419919 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.12e-08 Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
BLAST of CsGy4G021425 vs. ExPASy TrEMBL
Match: A0A6A3AFG2 (Putative Mitochondrial transcription termination factor family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110472pilonHSYRG00254 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.36e-07 Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of CsGy4G021425 vs. ExPASy TrEMBL
Match: A0A061F8J8 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_031710 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 5.05e-07 Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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