CsGy4G019383 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G019383
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr4: 25731725 .. 25732094 (+)
RNA-Seq Expression	CsGy4G019383
Synteny	CsGy4G019383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCCCAACGTATTCCGATTCATCATAATTTCCCTAATAAGACTATACCCAGCCCTAATTTCAGTAAATGTTTCAAAATACCAGCATCGTGCGTCGGTACTAACCTCTCGCTTGCCTCCGTAGTCAGCTCTCGTACGCCTGCTGATGTTTTTCCCCTCTCCTCTTAAAATTCGTAAGATTGAAATTTTATTATCTTTCAAATTTTCATTTCTTCAAGTTCATGGCTTGTGCTAGTTTGATTTTGGATTGATGTTGGGAAGTGTGTTGAGAGATGGAAGAAGAGGAGACGATGATATTGGCCGCGTGTCGTTGGAGATCAAAGAGATGGAAGAAGAGGGGACGAAAGAGGAGATGCGAGATGAGTGA

mRNA sequence

ATGAAACCCCAACGTATTCCGATTCATCATAATTTCCCTAATAAGACTATACCCAGCCCTAATTTCAGTAAATGTTTCAAAATACCAGCATCGTGCGTCGGTACTAACCTCTCGCTTGCCTCCGTAGTCAGCTCTCGTACGCCTGCTGATTTTGATTTTGGATTGATGTTGGGAAGTGTGTTGAGAGATGGAAGAAGAGGAGACGATGATATTGGCCGCGTGTCGTTGGAGATCAAAGAGATGGAAGAAGAGGGGACGAAAGAGGAGATGCGAGATGAGTGA

Coding sequence (CDS)

ATGAAACCCCAACGTATTCCGATTCATCATAATTTCCCTAATAAGACTATACCCAGCCCTAATTTCAGTAAATGTTTCAAAATACCAGCATCGTGCGTCGGTACTAACCTCTCGCTTGCCTCCGTAGTCAGCTCTCGTACGCCTGCTGATTTTGATTTTGGATTGATGTTGGGAAGTGTGTTGAGAGATGGAAGAAGAGGAGACGATGATATTGGCCGCGTGTCGTTGGAGATCAAAGAGATGGAAGAAGAGGGGACGAAAGAGGAGATGCGAGATGAGTGA

Protein sequence

MKPQRIPIHHNFPNKTIPSPNFSKCFKIPASCVGTNLSLASVVSSRTPADFDFGLMLGSVLRDGRRGDDDIGRVSLEIKEMEEEGTKEEMRDE*

Homology

[Close]

BLAST of CsGy4G019383 vs. NCBI nr
Match: KAE8649746.1 (hypothetical protein Csa_023756 [Cucumis sativus])

HSP 1 Score: 138 bits (348), Expect = 1.15e-40
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MKPQRIPIHHNFPNKTIPSPNFSKCFKIPASCVGTNLSLASVVSSRTPADFDFGLMLGSV 60
          MKPQRIPIHHNF NKTIPSPNFSKCFK+PASCVGTNLSLASVVSSRTPADFDFGLMLGSV
Sbjct: 1  MKPQRIPIHHNFLNKTIPSPNFSKCFKLPASCVGTNLSLASVVSSRTPADFDFGLMLGSV 60

Query: 61 LRDGRRGDD 69
          LRDGRRGDD
Sbjct: 61 LRDGRRGDD 69

[Close]

BLAST of CsGy4G019383 vs. ExPASy TrEMBL
Match: A0A0A0L3Y6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G539620 PE=4 SV=1)

HSP 1 Score: 182 bits (461), Expect = 6.47e-58
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MKPQRIPIHHNFPNKTIPSPNFSKCFKIPASCVGTNLSLASVVSSRTPADFDFGLMLGSV 60
          MKPQRIPIHHNF NKTIPSPNFSKCFK+PASCVGTNLSLASVVSSRTPADFDFGLMLGSV
Sbjct: 1  MKPQRIPIHHNFLNKTIPSPNFSKCFKLPASCVGTNLSLASVVSSRTPADFDFGLMLGSV 60

Query: 61 LRDGRRGDDDIGRVSLEIKEMEEEGTKEEMRDE 93
          LRDGRRGDDDIGRVSLEIKEMEEEGTKEEMRDE
Sbjct: 61 LRDGRRGDDDIGRVSLEIKEMEEEGTKEEMRDE 93

The following BLAST results are available for this feature:

BLAST of CsGy4G019383 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G019383 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649746.1	1.15e-40	97.10	hypothetical protein Csa_023756 [Cucumis sativus]	[more]

BLAST of CsGy4G019383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3Y6	6.47e-58	97.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G539620 PE=4 SV=1	[more]

BLAST of CsGy4G019383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G019383.1	CsGy4G019383.1	mRNA