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CsGy4G018193 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACCCACCCTTATCCTCCTCCCTCCCTCCCACTACTGTCTCCTTTCCACCTATTTCTTCTATCATTGCACCCACCCCTAAGGACGATAATGAAGTTTTGCACAACTCTGTTCCAGTTCCTCATAATTCTGAGAATCAAATTTCTACTAATGTGTATCCTTTAGATACAAGTTCTAATGCAATTTTGCAGGAATATGATGATCCTCCTTCCACTATGGGGATTTATGAAACTTCATCCTCTATGGCTCCTTCTCTTGTTGATGCTCTTCATGCTATAATGCTCATCTTATGA ATGAACCCACCCTTATCCTCCTCCCTCCCTCCCACTACTGTCTCCTTTCCACCTATTTCTTCTATCATTGCACCCACCCCTAAGGACGATAATGAAGTTTTGCACAACTCTGTTCCAGTTCCTCATAATTCTGAGAATCAAATTTCTACTAATGTGTATCCTTTAGATACAAGTTCTAATGCAATTTTGCAGGAATATGATGATCCTCCTTCCACTATGGGGATTTATGAAACTTCATCCTCTATGGCTCCTTCTCTTGTTGATGCTCTTCATGCTATAATGCTCATCTTATGA ATGAACCCACCCTTATCCTCCTCCCTCCCTCCCACTACTGTCTCCTTTCCACCTATTTCTTCTATCATTGCACCCACCCCTAAGGACGATAATGAAGTTTTGCACAACTCTGTTCCAGTTCCTCATAATTCTGAGAATCAAATTTCTACTAATGTGTATCCTTTAGATACAAGTTCTAATGCAATTTTGCAGGAATATGATGATCCTCCTTCCACTATGGGGATTTATGAAACTTCATCCTCTATGGCTCCTTCTCTTGTTGATGCTCTTCATGCTATAATGCTCATCTTATGA MNPPLSSSLPPTTVSFPPISSIIAPTPKDDNEVLHNSVPVPHNSENQISTNVYPLDTSSNAILQEYDDPPSTMGIYETSSSMAPSLVDALHAIMLIL* Homology
BLAST of CsGy4G018193 vs. NCBI nr
Match: KGN54718.1 (hypothetical protein Csa_012961 [Cucumis sativus]) HSP 1 Score: 188 bits (478), Expect = 4.55e-60 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsGy4G018193 vs. NCBI nr
Match: KAA0032169.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK14414.1 putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 125 bits (315), Expect = 4.47e-33 Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of CsGy4G018193 vs. NCBI nr
Match: KAA0066108.1 (Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa] >TYK15147.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]) HSP 1 Score: 50.1 bits (118), Expect = 1.90e-04 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0
BLAST of CsGy4G018193 vs. ExPASy TrEMBL
Match: A0A0A0KYW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432470 PE=4 SV=1) HSP 1 Score: 188 bits (478), Expect = 2.20e-60 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsGy4G018193 vs. ExPASy TrEMBL
Match: A0A5D3CTU1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00670 PE=4 SV=1) HSP 1 Score: 125 bits (315), Expect = 2.16e-33 Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of CsGy4G018193 vs. ExPASy TrEMBL
Match: A0A5D3CT89 (Reverse transcriptase, RNA-dependent DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00110 PE=4 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 9.20e-05 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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