CsGy4G017965 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G017965
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	HTH myb-type domain-containing protein
Location	Gy14Chr4: 23182696 .. 23183601 (-)
RNA-Seq Expression	CsGy4G017965
Synteny	CsGy4G017965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAAGAACACTCGAATTGGTTTTCTAGATGGGAAGACGAGCTCCCATCTCCAGATGAATTGATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTGGCTTTTGATATTCAGAATCCCAGCAATAGCAGTCCGCCGTTGCCTTGTCCGTCTCCGCCGCTTTCAAATCCTCTCCCTGGTTCCGGCAACGGAATTGTGCCGCCAAACTCCGCGGATTTCGGCGATTCTGCCGATTTGGGCTCCGGAGCCGCCAGCGACGAGCCGGCTCGGACTCTCAAGCGGCCGCGCCTTGTTTGGACGCCTCAACTTCACAAGCGATTTGTTGATGCTGTTGCTCATTTGGGTATAAAAAATGCTGTCCCCAAGACCATAATGCAGCTCATGAGTGTCGATGGGTTGACTAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGAATGCAGGGCTTGTCCGGTGGCGGCGGCGGCGGAGGTGCTGCCTTGGTTGGTTCATCCGATCCCGCTACTGACCATTTGTTTGCTAGCTCACCAGTTCCACCCCATTTGCTTCACTCTGCTCGCACCAGTTCAGACCATTTCTTGCCCTATGTTCCCATGGCCACTCTGCAGCAACACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCTGTCGCCGGCCATACACAGCTCCAGCCGCCGTATCATCGGCAGGTTGGACATTTTGGGTCGCCGCCAAATGGTCAGTTCGAGCACCCATTTTTAGCTAGACAGTCCCAGCCTATCCATAGAATGGGAACACCAGTGCATAATTCTGTTCCTAATTACATTGAAGATTTGGAATCAGCCAATGCCACTGGAGGACGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

mRNA sequence

ATGAGAGAAGAACACTCGAATTGGTTTTCTAGATGGGAAGACGAGCTCCCATCTCCAGATGAATTGATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTGGCTTTTGATATTCAGAATCCCAGCAATAGCAGTCCGCCGTTGCCTTGTCCGTCTCCGCCGCTTTCAAATCCTCTCCCTGGTTCCGGCAACGGAATTGTGCCGCCAAACTCCGCGGATTTCGGCGATTCTGCCGATTTGGGCTCCGGAGCCGCCAGCGACGAGCCGGCTCGGACTCTCAAGCGGCCGCGCCTTGTTTGGACGCCTCAACTTCACAAGCGATTTGTTGATGCTGTTGCTCATTTGGGTATAAAAAATGCTGTCCCCAAGACCATAATGCAGCTCATGAGTGTCGATGGGTTGACTAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGAATGCAGGGCTTGTCCGGTGGCGGCGGCGGCGGAGGTGCTGCCTTGGTTGGTTCATCCGATCCCGCTACTGACCATTTGTTTGCTAGCTCACCAGTTCCACCCCATTTGCTTCACTCTGCTCGCACCAGTTCAGACCATTTCTTGCCCTATGTTCCCATGGCCACTCTGCAGCAACACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCTGTCGCCGGCCATACACAGCTCCAGCCGCCGTATCATCGGCAGGTTGGACATTTTGGGTCGCCGCCAAATGGTCAGTTCGAGCACCCATTTTTAGCTAGACAGTCCCAGCCTATCCATAGAATGGGAACACCAGTGCATAATTCTGTTCCTAATTACATTGAAGATTTGGAATCAGCCAATGCCACTGGAGGACGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

Coding sequence (CDS)

ATGAGAGAAGAACACTCGAATTGGTTTTCTAGATGGGAAGACGAGCTCCCATCTCCAGATGAATTGATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTGGCTTTTGATATTCAGAATCCCAGCAATAGCAGTCCGCCGTTGCCTTGTCCGTCTCCGCCGCTTTCAAATCCTCTCCCTGGTTCCGGCAACGGAATTGTGCCGCCAAACTCCGCGGATTTCGGCGATTCTGCCGATTTGGGCTCCGGAGCCGCCAGCGACGAGCCGGCTCGGACTCTCAAGCGGCCGCGCCTTGTTTGGACGCCTCAACTTCACAAGCGATTTGTTGATGCTGTTGCTCATTTGGGTATAAAAAATGCTGTCCCCAAGACCATAATGCAGCTCATGAGTGTCGATGGGTTGACTAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGAATGCAGGGCTTGTCCGGTGGCGGCGGCGGCGGAGGTGCTGCCTTGGTTGGTTCATCCGATCCCGCTACTGACCATTTGTTTGCTAGCTCACCAGTTCCACCCCATTTGCTTCACTCTGCTCGCACCAGTTCAGACCATTTCTTGCCCTATGTTCCCATGGCCACTCTGCAGCAACACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCTGTCGCCGGCCATACACAGCTCCAGCCGCCGTATCATCGGCAGGTTGGACATTTTGGGTCGCCGCCAAATGGTCAGTTCGAGCACCCATTTTTAGCTAGACAGTCCCAGCCTATCCATAGAATGGGAACACCAGTGCATAATTCTGTTCCTAATTACATTGAAGATTTGGAATCAGCCAATGCCACTGGAGGACGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

Protein sequence

MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNPLPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQVGHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGDD*

Homology

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BLAST of CsGy4G017965 vs. ExPASy Swiss-Prot
Match: O22210 (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-60
Identity = 139/238 (58.40%), Postives = 164/238 (68.91%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWE+ELPSP+EL+P+SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -SNSSPPLPCPSPPLSNPLPGSGNGIVPPNSADF--GDSADLGSGAASDEPARTLKRPRL 120
            S+++P  P P+PP   P+           ++DF  GDS DLGSG+   EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPP---PM---------MMNSDFGGGDSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSG 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG +G
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGNG 180

Query: 181 GGGGGGAALVGSSDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQ 219
            G  GG  +V  SD ATD LFASSPVP H L     S D+ +P +  + + +H   QQ
Sbjct: 181 NGITGGHVIV--SDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKHVITQQ 219

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BLAST of CsGy4G017965 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-37
Identity = 122/307 (39.74%), Postives = 151/307 (49.19%), Query Frame = 0


Query: 10  SRWEDELPSPDELMPLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L  LS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  ------------QNPSNSSPPLPCPSPPLSNPLPGSGNGIVPPNSADFGDSADLGSGAAS 129
                           +SSP         SN     G G+ P    D   +A+ G     
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP----DSAMAAEEGDSGTE 139

Query: 130 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 189
           D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKY
Sbjct: 140 DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 199

Query: 190 RLYLKRMQGLSGGGGGGGAALVGSSDPATDHLFASSPVPPHL---LHSARTSSDHFLPYV 249
           RLYLKRMQGL+  G             A+D LF+S+PVPP     +     SS +    +
Sbjct: 200 RLYLKRMQGLTNEG-----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPI 259

Query: 250 PMATLQQHHHHQQQMAAAAAVAGHTQLQ---------PPYHR-QVGHFGSPPNGQFE-HP 262
           P A      +  QQM      A H  +Q          PYH+    H G+  NG FE +P
Sbjct: 260 PGA------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNP 305

[Close]

BLAST of CsGy4G017965 vs. ExPASy Swiss-Prot
Match: Q94DH3 (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-36
Identity = 110/235 (46.81%), Postives = 132/235 (56.17%), Query Frame = 0


Query: 12  WEDELPSPDELMPLSQTLITPDLALAF-----------DIQNPSNSS-PPLPCPSPPLSN 71
           WE  LP  DEL PLSQ L+   LA AF           D+   S ++   L   S   S+
Sbjct: 22  WETGLPGADELTPLSQPLVPAGLAAAFRIPPEPGRTLLDVHRASAATVSRLRRASSSSSS 81

Query: 72  PLP-----GSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAV 131
             P     G+G G    + A+ G  AD G+G  ++  +   KR RLVWTPQLHKRFV+ V
Sbjct: 82  SFPAFASKGAGTG---ADEAESGGGADGGNGNTNNSSS---KRARLVWTPQLHKRFVEVV 141

Query: 132 AHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSD 191
           AHLG+KNAVPKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQGLS  G            
Sbjct: 142 AHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEG-----------P 201

Query: 192 PATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGH 230
             +DH+FAS+PVP   LH    S     PY P      HHH     A AA V+ +
Sbjct: 202 SPSDHIFASTPVPHASLHDQVPS-----PYHP----HPHHHSYNNAAYAATVSSY 230

[Close]

BLAST of CsGy4G017965 vs. ExPASy Swiss-Prot
Match: Q9LTH4 (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.5e-33
Identity = 106/268 (39.55%), Postives = 138/268 (51.49%), Query Frame = 0


Query: 12  WEDELPSPDELMPLSQTLITPDLALAF----------------------DIQNPSNSSPP 71
           WE  LP+ D+L PLSQ L+   LALAF                       +++ +N+S  
Sbjct: 29  WEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSV 88

Query: 72  LPCPSPPLSNPLPGSGNGIVPPNSADFGD-------SADLGSGAASDEPARTLKRPRLVW 131
           +      + + +PGS         +D G+       +A+ G     D   +T KRPRLVW
Sbjct: 89  MEEVVDRVESSVPGSDP--KKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVW 148

Query: 132 TPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGG 191
           TPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL+   
Sbjct: 149 TPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT--- 208

Query: 192 GGGGAALVGSSDP--ATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQM 246
                      DP  ++D LF+S+PVPP        S+      VP+ ++     +  QM
Sbjct: 209 --------TEEDPYSSSDQLFSSTPVPPQSFQDGGGSNGKLGVPVPVPSMVPIPGYGNQM 268

[Close]

BLAST of CsGy4G017965 vs. ExPASy Swiss-Prot
Match: Q940D0 (Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.4e-20
Identity = 46/75 (61.33%), Postives = 61/75 (81.33%), Query Frame = 0


Query: 85  GAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 144
           G   DE A  LK+PR+VW+ +LH++FV AV  LG++ AVPK I++LM+V GLTRENVASH
Sbjct: 225 GDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASH 284

Query: 145 LQKYRLYLKRMQGLS 160
           LQKYR+YL+R+ G+S
Sbjct: 285 LQKYRIYLRRLGGVS 299

[Close]

BLAST of CsGy4G017965 vs. NCBI nr
Match: XP_004144322.1 (transcription factor MYBC1 [Cucumis sativus] >KGN54684.1 hypothetical protein Csa_012282 [Cucumis sativus])

HSP 1 Score: 612 bits (1577), Expect = 6.50e-221
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of CsGy4G017965 vs. NCBI nr
Match: XP_008455739.1 (PREDICTED: transcription factor PCL1-like [Cucumis melo] >KAA0025859.1 transcription factor PCL1-like [Cucumis melo var. makuwa] >TYK22606.1 transcription factor PCL1-like [Cucumis melo var. makuwa])

HSP 1 Score: 603 bits (1555), Expect = 1.47e-217
Identity = 297/301 (98.67%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGG GGGAALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLP+VPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMGT VHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of CsGy4G017965 vs. NCBI nr
Match: XP_038882973.1 (transcription factor MYBC1-like [Benincasa hispida])

HSP 1 Score: 593 bits (1530), Expect = 9.52e-214
Identity = 291/301 (96.68%), Postives = 295/301 (98.01%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSGAA DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGG ALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGGALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLP+VPMATLQQHHHHQQQMAAAAAVA H+QLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVASHSQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMG  VHNSVPNYIEDLESANA+GGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGASVHNSVPNYIEDLESANASGGRKVLTLFPTGD 300

[Close]

BLAST of CsGy4G017965 vs. NCBI nr
Match: XP_023543478.1 (transcription factor MYBC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567 bits (1461), Expect = 3.38e-203
Identity = 283/304 (93.09%), Postives = 290/304 (95.39%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQN SN+SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-GGGGGGGAALVGSSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGGGGG  LV SSDP TDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGLVASSDP-TDH 180

Query: 181 LFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAA--VAGHTQLQPPYH 240
           LFASSPVPPHLLHSAR++SDHFLP+VPMATLQQHHHHQQ MAAAAA  VAGH QLQP YH
Sbjct: 181 LFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAVAGHPQLQPSYH 240

Query: 241 RQVGHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFP 300
           RQVGHFGSPPNGQFEHPFLARQSQP+HRMG PVHNS+PNYIEDLESANA GGRKVLTLFP
Sbjct: 241 RQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHNSIPNYIEDLESANANGGRKVLTLFP 300

[Close]

BLAST of CsGy4G017965 vs. NCBI nr
Match: KAG6604300.1 (Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 565 bits (1457), Expect = 1.43e-202
Identity = 282/305 (92.46%), Postives = 290/305 (95.08%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQN SN+SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS--GGGGGGGAALVGSSDPATD 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS  GGGGGGG  LV S+DP TD
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGGLVASTDP-TD 180

Query: 181 HLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAA--VAGHTQLQPPY 240
           HLFASSPVPPHLLHSAR++SDHFLP+VPMATLQQHHHHQQ MAAAAA  VAGH QLQP Y
Sbjct: 181 HLFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAVAGHPQLQPSY 240

Query: 241 HRQVGHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLF 300
           HRQVGHFGSPPNGQFEHPFLARQSQP+HRMG PVHNS+PNYIEDLESANA GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHNSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of CsGy4G017965 vs. ExPASy TrEMBL
Match: A0A0A0L0V3 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G425730 PE=4 SV=1)

HSP 1 Score: 612 bits (1577), Expect = 3.15e-221
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of CsGy4G017965 vs. ExPASy TrEMBL
Match: A0A5A7SKT7 (Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00270 PE=4 SV=1)

HSP 1 Score: 603 bits (1555), Expect = 7.12e-218
Identity = 297/301 (98.67%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGG GGGAALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLP+VPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMGT VHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of CsGy4G017965 vs. ExPASy TrEMBL
Match: A0A1S3C2U8 (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103495840 PE=4 SV=1)

HSP 1 Score: 603 bits (1555), Expect = 7.12e-218
Identity = 297/301 (98.67%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGG GGGAALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLP+VPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMGT VHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of CsGy4G017965 vs. ExPASy TrEMBL
Match: A0A6J1HT87 (transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111467241 PE=4 SV=1)

HSP 1 Score: 565 bits (1455), Expect = 1.39e-202
Identity = 282/305 (92.46%), Postives = 290/305 (95.08%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQN SN+SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-GGGGGGGAALVGSSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGGGGG  LV SSDP TDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGLVASSDP-TDH 180

Query: 181 LFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAA---VAGHTQLQPPY 240
           LFASSPVPPHLLHSAR++SDHFLP+VPMATLQQHHHHQQ MAAAAA   VAGH QLQP Y
Sbjct: 181 LFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAAVAGHPQLQPSY 240

Query: 241 HRQVGHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLF 300
           HRQVGHFGSPPNGQFEHPFLARQSQP+HRMG PVH+S+PNYIEDLESANA GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHSSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of CsGy4G017965 vs. ExPASy TrEMBL
Match: A0A6J1F331 (transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111439239 PE=4 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 5.67e-202
Identity = 282/305 (92.46%), Postives = 289/305 (94.75%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQN SN+SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGS AASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSVAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS--GGGGGGGAALVGSSDPATD 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS  GGGGGGG  LV SSDP TD
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGGLVASSDP-TD 180

Query: 181 HLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAA--VAGHTQLQPPY 240
           HLFASSPVPPHLLHSAR++SDHFLP+VPMATLQQHHHHQQ MAAAAA  VAGH QLQP Y
Sbjct: 181 HLFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAVAGHPQLQPSY 240

Query: 241 HRQVGHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLF 300
           HRQVGHFGSPPNGQFEHPFLARQSQP+HRMG PVHNS+PNYIEDLESANA GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHNSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of CsGy4G017965 vs. TAIR 10
Match: AT3G10760.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 353.6 bits (906), Expect = 1.6e-97
Identity = 220/350 (62.86%), Postives = 242/350 (69.14%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPS----NSSPP------L 60
           MRE+ S+WF+RWE+ELPSP+ELMP+SQ+LI+PDLALAFDI+ P+    NS+ P       
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQ 60

Query: 61  PCPSPPLSNPLPGSGNGIVPPNSADF-GDSADLGS-GAASDEPARTLKRPRLVWTPQLHK 120
             P  P    LP S       +SA+F  DSADLGS GAA DEPARTLKRPRLVWTPQLHK
Sbjct: 61  TTPPTPSQLQLPSSQAN----SSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHK 120

Query: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAA 180
           RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGG G   
Sbjct: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAG--- 180

Query: 181 LVGSSDPATDHLFASSPVPPHLLHSART-SSDHFLP-YVPMATLQQHHHHQQQM--AAAA 240
               SDPATD LFASSPVP H LH  R  SSDHF+P +VP+ATLQQ    QQQM  AAAA
Sbjct: 181 ----SDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQ----QQQMAAAAAA 240

Query: 241 AVAGHTQLQPP-YHRQV--GHFGSPPNGQFEHP--------------------------F 300
           A A +  LQPP +HRQ+   HFGSP NG F  P                          F
Sbjct: 241 AAAANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSF 300

Query: 301 LA---RQSQPIHRMGTP-VHNSVPNYIEDLESANATGGRKVLTLFPTGDD 302
           LA    Q QPI RM TP +H+ V NY+EDLESANA GGR VLTLFPT DD
Sbjct: 301 LAVRQTQQQPIQRMSTPSLHSPVSNYVEDLESANANGGRTVLTLFPTRDD 335

[Close]

BLAST of CsGy4G017965 vs. TAIR 10
Match: AT5G05090.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 6.2e-78
Identity = 178/310 (57.42%), Postives = 211/310 (68.06%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDI--QNPSNSSPPLPCPSPPLS 60
           MREE SNWF++WE+ELPSP+EL+PLSQ+LITPDLA+AFD+   N SNS  PLP  +PP  
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNSGQPLPQTTPP-- 60

Query: 61  NPLPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 120
                       PNS     SA++   +  DEPARTLKRPRLVWTPQLHKRFVDAVAHLG
Sbjct: 61  -----------QPNS-----SAEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 120

Query: 121 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATD 180
           IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM+  SGGGGG      GS D  +D
Sbjct: 121 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK--SGGGGG------GSGD--SD 180

Query: 181 HLFASSPVPPHLLH-SARTSSDHFLP-YVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPY 240
           HLFASSPVPPH LH ++R SSD F+P +VP++T QQH      +AA  +   H Q+    
Sbjct: 181 HLFASSPVPPHFLHPTSRQSSDLFIPSFVPISTQQQH------IAAPPSQFLHRQI---- 240

Query: 241 HRQVGHFGSPPNGQFEHPFLARQ----SQPIHRMGT-PVHNSVPNYIEDLESANATGGRK 300
                +F SP     +  FLARQ     QP+ +  +  +H+ V NY +DL+S    G + 
Sbjct: 241 --SAVNFTSPTKATDQAMFLARQQSELQQPVFKPSSLHLHSQVANYTQDLKS----GAKT 266

Query: 301 VLTLFPTGDD 302
           VLTLFPT DD
Sbjct: 301 VLTLFPTRDD 266

[Close]

BLAST of CsGy4G017965 vs. TAIR 10
Match: AT2G40970.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-61
Identity = 139/238 (58.40%), Postives = 164/238 (68.91%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWE+ELPSP+EL+P+SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -SNSSPPLPCPSPPLSNPLPGSGNGIVPPNSADF--GDSADLGSGAASDEPARTLKRPRL 120
            S+++P  P P+PP   P+           ++DF  GDS DLGSG+   EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPP---PM---------MMNSDFGGGDSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSG 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG +G
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGNG 180

Query: 181 GGGGGGAALVGSSDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQ 219
            G  GG  +V  SD ATD LFASSPVP H L     S D+ +P +  + + +H   QQ
Sbjct: 181 NGITGGHVIV--SDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKHVITQQ 219

[Close]

BLAST of CsGy4G017965 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-38
Identity = 122/307 (39.74%), Postives = 151/307 (49.19%), Query Frame = 0


Query: 10  SRWEDELPSPDELMPLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L  LS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  ------------QNPSNSSPPLPCPSPPLSNPLPGSGNGIVPPNSADFGDSADLGSGAAS 129
                           +SSP         SN     G G+ P    D   +A+ G     
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP----DSAMAAEEGDSGTE 139

Query: 130 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 189
           D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKY
Sbjct: 140 DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 199

Query: 190 RLYLKRMQGLSGGGGGGGAALVGSSDPATDHLFASSPVPPHL---LHSARTSSDHFLPYV 249
           RLYLKRMQGL+  G             A+D LF+S+PVPP     +     SS +    +
Sbjct: 200 RLYLKRMQGLTNEG-----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPI 259

Query: 250 PMATLQQHHHHQQQMAAAAAVAGHTQLQ---------PPYHR-QVGHFGSPPNGQFE-HP 262
           P A      +  QQM      A H  +Q          PYH+    H G+  NG FE +P
Sbjct: 260 PGA------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNP 305

[Close]

BLAST of CsGy4G017965 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-38
Identity = 122/307 (39.74%), Postives = 151/307 (49.19%), Query Frame = 0


Query: 10  SRWEDELPSPDELMPLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L  LS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  ------------QNPSNSSPPLPCPSPPLSNPLPGSGNGIVPPNSADFGDSADLGSGAAS 129
                           +SSP         SN     G G+ P    D   +A+ G     
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP----DSAMAAEEGDSGTE 139

Query: 130 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 189
           D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKY
Sbjct: 140 DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 199

Query: 190 RLYLKRMQGLSGGGGGGGAALVGSSDPATDHLFASSPVPPHL---LHSARTSSDHFLPYV 249
           RLYLKRMQGL+  G             A+D LF+S+PVPP     +     SS +    +
Sbjct: 200 RLYLKRMQGLTNEG-----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPI 259

Query: 250 PMATLQQHHHHQQQMAAAAAVAGHTQLQ---------PPYHR-QVGHFGSPPNGQFE-HP 262
           P A      +  QQM      A H  +Q          PYH+    H G+  NG FE +P
Sbjct: 260 PGA------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNP 305

The following BLAST results are available for this feature:

BLAST of CsGy4G017965 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22210	1.5e-60	58.40	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
Q9SNB4	2.3e-37	39.74	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q94DH3	2.6e-36	46.81	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
Q9LTH4	4.5e-33	39.55	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
Q940D0	4.4e-20	61.33	Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE...	[more]

BLAST of CsGy4G017965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144322.1	6.50e-221	100.00	transcription factor MYBC1 [Cucumis sativus] >KGN54684.1 hypothetical protein Cs...	[more]
XP_008455739.1	1.47e-217	98.67	PREDICTED: transcription factor PCL1-like [Cucumis melo] >KAA0025859.1 transcrip...	[more]
XP_038882973.1	9.52e-214	96.68	transcription factor MYBC1-like [Benincasa hispida]	[more]
XP_023543478.1	3.38e-203	93.09	transcription factor MYBC1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6604300.1	1.43e-202	92.46	Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsGy4G017965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0V3	3.15e-221	100.00	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G42573...	[more]
A0A5A7SKT7	7.12e-218	98.67	Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C2U8	7.12e-218	98.67	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103495840 PE=4 SV=1	[more]
A0A6J1HT87	1.39e-202	92.46	transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111467241 PE=4...	[more]
A0A6J1F331	5.67e-202	92.46	transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111439239 PE...	[more]

BLAST of CsGy4G017965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10760.1	1.6e-97	62.86	Homeodomain-like superfamily protein	[more]
AT5G05090.1	6.2e-78	57.42	Homeodomain-like superfamily protein	[more]
AT2G40970.1	1.1e-61	58.40	Homeodomain-like superfamily protein	[more]
AT3G46640.1	1.7e-38	39.74	Homeodomain-like superfamily protein	[more]
AT3G46640.2	1.7e-38	39.74	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 101..149 e-value: 2.2E-8 score: 34.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 102..153 score: 11.409622
None	No IPR available	GENE3D	1.10.10.60		coord: 94..156 e-value: 7.8E-32 score: 111.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..91
None	No IPR available	PANTHER	PTHR31442:SF31	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..301
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 98..150 e-value: 3.2E-24 score: 83.0
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..301
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 94..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G017965.1	CsGy4G017965.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity