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CsGy4G017830 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGAAGGTAAGCGAGGGGCTCCCAGTTCACACCATGGCTTCCTTTCTCCTCAGCTCCAATCCCCTCTCCACCTCTTTCCATTTCTCTACGTCCCCGTCGCCGTCATGTTTTCCTCCGACTTCTGCCATCCCTAGTATGTCTCTCTTCCTCAACTTTCCTTTCCCTTCCTCTGCTCGACGGGATCGAATGAACTTTTTTGTCTAATTCTTATTCCTATCTACATTTCTCTTTCTACTTCATTGTTTGTTGTACGATTTATTCAAATGGGTAATTCCTTTTTTCTCCAACTCGGAAAACTATGTGGTGCTTCAGACAATTTTCTTGCTTCCACTCATTTGTCCGTCAGGCATTTTGTCAAACAGTTGGACTCGATTTTTTAAGCTTCTCTTTTGATGTGCACTAGATCTCGCTCTCGCTTGCCTGAATGTGTTTTTGTTCTGTATCTTGTGTTTTATAGGCTGATTGCTCTCTTTCTTGTTGATTGTCCTCAATTTCACATATACTTTACAAGTTTCCTTGTCTTGAAATACGGTTGAATTTCTTTGAAGAGAGATTGCTTTGAGTGAATTTCATGAATATTAATTTGATTCATATAATATCAAATAGGAGAAATTAACATTATCAGGATCCCTAGCCCCCCACGCTGTGATAGATTACATATTAAAAAACGAACTCAATCAAAAGCCTTTTAAATAGATTACAGTCTATTTATTCTTTGGTTACATTACAACTAAACAAGCTATTTAAACTTGGTTTATATTGATAAAAGAAAGTATTACAAGCTTCTTGGCGAAACTTTTGAAGTTTTTTTACTAACTAATGGTCTATTAAGTGTTTAATACGTCTCTAAACTTTTAATATTGTTTACCGTAGATTTCTAAGTTTTAAACAATATCTAGTAGGTCTTTAAAATATTAGTATTAAACTTTTAACTGTCTTTATTTGGCTCTGAATTTGTATAGAGATCTCATGTATCAGGTTTACAATCTATTAAACACTCTTTTAAATTAAGGGATCTCTTAGACACAATTCGATAAGCTTAGAGACCAAAATAATACATATTCTTGGCTTTCATTGGAATGATTATTTCCTTGCACTTTATGAATCCCAGTCTAATTTCTATTCCTTTATTGTGGTTTCCATTTCAGGTTCTATGTTGCTCATGAAGCCTATTGGGTTTCAGCCAAAACACTTTAATGGAGTCCGGCTACGAAACCACTCTTTTGTTGAAAATACAGCGTCGTTAGTTGTCAAAGCTGCATCTGAGACTGATGCTACGGGAGAAACTGACAGTAGTGACGTGCAGCCCGCTGCAGAAGCTAAAAAGGAGGATGTTCCAGTTGATAAACTTCCATTAGAATCAAAGTTACAGGAGAGGCTGGAACAGAAGGCAAGAATGAAGTTAGCAAAAAAGATTAGGCTGCGGAGGAAGCGGCTTGTTCAGAAACGCCATTTGAGGAAGAAGGGACGATGGCCTCCATCAAAGATGAAGAAGTTGAAGAACGTTTGATAATCTTGAGCTCCTTGAATTCAATTCTTGCAGTTTTCAGTTCTAGAGGTGCCATTTCTCCTTATCGCTTCCAATTTACTGTCTTATTTCTTTATACTTTCAAGGAAATGTACTTGCTTCTTAATATACCTGAAAGGATCCAGTGAGTAATGAAATGTGCAAATTCTTCTTAGTTTTGAACGACTAAATTGTGAGTTGAAAGATGACTGTACAGTTCAACAAGCTTGAATACTTGATTTAGATTTTTATTGGTAATCTTGCTAAAAAAACCCTTGCACAAAGGCATTGTCTTAGAAACTTAGACTAAGATGAAATTGCACGTCGAGATGAATCCCCCCCAGGGAGGAGTTTGAGCTTGACGTCTGTCTCAATTTGTACTGACTGTGGTTGAATAAAGATGAAAGGTAAGAGTTCTGGC CCGAAGGTAAGCGAGGGGCTCCCAGTTCACACCATGGCTTCCTTTCTCCTCAGCTCCAATCCCCTCTCCACCTCTTTCCATTTCTCTACGTCCCCGTCGCCGTCATGTTTTCCTCCGACTTCTGCCATCCCTAGTTCTATGTTGCTCATGAAGCCTATTGGGTTTCAGCCAAAACACTTTAATGGAGTCCGGCTACGAAACCACTCTTTTGTTGAAAATACAGCGTCGTTAGTTGTCAAAGCTGCATCTGAGACTGATGCTACGGGAGAAACTGACAGTAGTGACGTGCAGCCCGCTGCAGAAGCTAAAAAGGAGGATGTTCCAGTTGATAAACTTCCATTAGAATCAAAGTTACAGGAGAGGCTGGAACAGAAGGCAAGAATGAAGTTAGCAAAAAAGATTAGGCTGCGGAGGAAGCGGCTTGTTCAGAAACGCCATTTGAGGAAGAAGGGACGATGGCCTCCATCAAAGATGAAGAAGTTGAAGAACGTTTGATAATCTTGAGCTCCTTGAATTCAATTCTTGCAGTTTTCAGTTCTAGAGGTGCCATTTCTCCTTATCGCTTCCAATTTACTGTCTTATTTCTTTATACTTTCAAGGAAATGTACTTGCTTCTTAATATACCTGAAAGGATCCAGTGAGTAATGAAATGTGCAAATTCTTCTTAGTTTTGAACGACTAAATTGTGAGTTGAAAGATGACTGTACAGTTCAACAAGCTTGAATACTTGATTTAGATTTTTATTGGTAATCTTGCTAAAAAAACCCTTGCACAAAGGCATTGTCTTAGAAACTTAGACTAAGATGAAATTGCACGTCGAGATGAATCCCCCCCAGGGAGGAGTTTGAGCTTGACGTCTGTCTCAATTTGTACTGACTGTGGTTGAATAAAGATGAAAGGTAAGAGTTCTGGC ATGGCTTCCTTTCTCCTCAGCTCCAATCCCCTCTCCACCTCTTTCCATTTCTCTACGTCCCCGTCGCCGTCATGTTTTCCTCCGACTTCTGCCATCCCTAGTTCTATGTTGCTCATGAAGCCTATTGGGTTTCAGCCAAAACACTTTAATGGAGTCCGGCTACGAAACCACTCTTTTGTTGAAAATACAGCGTCGTTAGTTGTCAAAGCTGCATCTGAGACTGATGCTACGGGAGAAACTGACAGTAGTGACGTGCAGCCCGCTGCAGAAGCTAAAAAGGAGGATGTTCCAGTTGATAAACTTCCATTAGAATCAAAGTTACAGGAGAGGCTGGAACAGAAGGCAAGAATGAAGTTAGCAAAAAAGATTAGGCTGCGGAGGAAGCGGCTTGTTCAGAAACGCCATTTGAGGAAGAAGGGACGATGGCCTCCATCAAAGATGAAGAAGTTGAAGAACGTTTGA MASFLLSSNPLSTSFHFSTSPSPSCFPPTSAIPSSMLLMKPIGFQPKHFNGVRLRNHSFVENTASLVVKAASETDATGETDSSDVQPAAEAKKEDVPVDKLPLESKLQERLEQKARMKLAKKIRLRRKRLVQKRHLRKKGRWPPSKMKKLKNV* Homology
BLAST of CsGy4G017830 vs. ExPASy Swiss-Prot
Match: P11891 (50S ribosomal protein 5, chloroplastic OS=Pisum sativum OX=3888 GN=PSRP5 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.9e-15 Identity = 67/142 (47.18%), Postives = 88/142 (61.97%), Query Frame = 0
BLAST of CsGy4G017830 vs. ExPASy Swiss-Prot
Match: P27684 (50S ribosomal protein 5 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP5 PE=1 SV=2) HSP 1 Score: 82.0 bits (201), Expect = 6.3e-15 Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0
BLAST of CsGy4G017830 vs. ExPASy Swiss-Prot
Match: Q9LER7 (50S ribosomal protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSRP5 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.1e-14 Identity = 71/156 (45.51%), Postives = 90/156 (57.69%), Query Frame = 0
BLAST of CsGy4G017830 vs. NCBI nr
Match: XP_004144312.1 (50S ribosomal protein 5 alpha, chloroplastic [Cucumis sativus] >KGN54666.1 hypothetical protein Csa_012356 [Cucumis sativus]) HSP 1 Score: 278 bits (710), Expect = 1.18e-93 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CsGy4G017830 vs. NCBI nr
Match: XP_008455762.1 (PREDICTED: 50S ribosomal protein 5, chloroplastic [Cucumis melo]) HSP 1 Score: 250 bits (638), Expect = 1.04e-82 Identity = 143/153 (93.46%), Postives = 144/153 (94.12%), Query Frame = 0
BLAST of CsGy4G017830 vs. NCBI nr
Match: XP_038881132.1 (50S ribosomal protein 5, chloroplastic [Benincasa hispida] >XP_038881133.1 50S ribosomal protein 5, chloroplastic [Benincasa hispida] >XP_038881134.1 50S ribosomal protein 5, chloroplastic [Benincasa hispida]) HSP 1 Score: 231 bits (588), Expect = 5.47e-75 Identity = 136/158 (86.08%), Postives = 139/158 (87.97%), Query Frame = 0
BLAST of CsGy4G017830 vs. NCBI nr
Match: XP_022154476.1 (50S ribosomal protein 5, chloroplastic [Momordica charantia]) HSP 1 Score: 223 bits (568), Expect = 5.89e-72 Identity = 129/155 (83.23%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of CsGy4G017830 vs. NCBI nr
Match: XP_023543496.1 (50S ribosomal protein 5 alpha, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220 bits (560), Expect = 1.04e-70 Identity = 128/157 (81.53%), Postives = 134/157 (85.35%), Query Frame = 0
BLAST of CsGy4G017830 vs. ExPASy TrEMBL
Match: A0A0A0L3F4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G419580 PE=4 SV=1) HSP 1 Score: 278 bits (710), Expect = 5.71e-94 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CsGy4G017830 vs. ExPASy TrEMBL
Match: A0A1S3C2X0 (50S ribosomal protein 5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495861 PE=4 SV=1) HSP 1 Score: 250 bits (638), Expect = 5.04e-83 Identity = 143/153 (93.46%), Postives = 144/153 (94.12%), Query Frame = 0
BLAST of CsGy4G017830 vs. ExPASy TrEMBL
Match: A0A6J1DNT9 (50S ribosomal protein 5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021747 PE=4 SV=1) HSP 1 Score: 223 bits (568), Expect = 2.85e-72 Identity = 129/155 (83.23%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of CsGy4G017830 vs. ExPASy TrEMBL
Match: A0A6J1GE62 (50S ribosomal protein 5 alpha, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453134 PE=4 SV=1) HSP 1 Score: 218 bits (554), Expect = 4.12e-70 Identity = 127/157 (80.89%), Postives = 133/157 (84.71%), Query Frame = 0
BLAST of CsGy4G017830 vs. ExPASy TrEMBL
Match: A0A6J1HS41 (50S ribosomal protein 5 alpha, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467286 PE=4 SV=1) HSP 1 Score: 217 bits (552), Expect = 7.78e-70 Identity = 125/155 (80.65%), Postives = 133/155 (85.81%), Query Frame = 0
BLAST of CsGy4G017830 vs. TAIR 10
Match: AT3G56910.1 (plastid-specific 50S ribosomal protein 5 ) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-15 Identity = 71/156 (45.51%), Postives = 90/156 (57.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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