CsGy4G017510 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAATTCTCACAACTCATTTCAATTCCAACTCAGACTCTCTTTGTTTTTCCCTTTTTGCTCTTCTTCACTTCCTCTGGTTCTGATTTGACTGTTTCTTTTCTGTTTTCCGGTGGCTATTTTCGACAGCCATGGGCGGTGGGCCGCCGTATTTGGAACTCTTTGTTGAGGAGACTAGTTTCTACAACCGCATTGTTTTGGGAACCATTTTTCCAAACTTTAGTTTAGACCCATTTCCTCATATTCTTCAAACTTGGCTTCGAAACTGCGTTGGTGGATTCTTAATTTACTTCTTTTCTGGCTTTCTTTGGTGCTTTTACATCTATTACTGGAAGCGCAATGTCTATGTTCCCAAAGGTGTTGGCCTTTTTCTTCTTTCTTTTTCAGTTTGCTCTCTTTTGTGTTTTTTGCTGTTATTATCTCAACTGCTCCATCAATGAGTTCTAATTCTGGTTATTTGGGTTTTGTTATTTCCCTTACTTCTTTGTTGCCTCACTTTTTGATCTCTTAGTATTTCACTGATTATCCAACAGATTTGCGTGTCATTCCGGAGAATCTGGATTTGGTTTTCTTTCTACTAATTTCAGCCACTACTTCATGTTTGATTTAGCTATTATTCTTCAACTTATTCTTTTTTCTTTTGCTTATACGTGTGCTTACTGCATGCTATATCGGATTCATTTTGGTTCAATTGATTCATTTTGTTTTTGAATGTTGAGGTATTTTTTTTTTATTCTTCATTGATACTCTCTTCTTATGACACCATGGGATGTGCAAAAATAGTTTGTCTGGAAAGCTCTGTTTGAGATAAACTTAACATGACTTTGATGAGCCTTTTTACTTTTGAGATGCTGGTGATTTTTGGCTTTCCAGGATGGACGATTATAACGGATTACTAATCTATAGTAGTTTGAATCATCTACATGTTCTTGACAGATAGATTTCCTAAAAGACATGTTTTGATTTGTGCAAGCTGATGATTCTTCTTTCTTGTTTTTCATAAACAGATGAATTGTTCTGAAAAGAACTGTATATCCAACACTTAACCATAATAATTTAGAGCTAATAGATAGTATAGGATGTTGGGGCCTCTCAGTTAGGCTACTTAAAGAAGAGGATATTTCATTTGTTGCTCAAATGAAAGATTCTTCTATGCATGAACATAAATATTCAGGGAGAGGACATTGTATTTCCTTTAGTTTACATTTGTTACTTTTGGCTTAGAATATCAGTCACACCTATGATATTTGTGATTTAGATACTATTTATATAATGTGGTCTTTGAGAAACCTTGACTAATTTCAAGAAACAACTGCCTATTTTTATACACTTAGCGTTAATCAACTTGTGGGATGTTTTTGTAGATGGCTATTTTGAACTAAATATCATATGAGATGAATATTGAATATAGAGTCGGGCACACTATTCAATTGAAAGTTTTCTCAAGAGTAGCCTGTTTTTCTAATTTGATAGTTTTGTATGTATATTATATACCAATTTTTCATTTCAGGATAATTTGGTTTAGTATCATTGAATAGAATAAGCTTTTAAACTTAGAAATTATGTCGATCATCTGCCTCCGATCTGTTGTTTGATGAGTTGAGTACTTTTTCCCCCCAAAATTCACCAGCAGTTGAAGACGCGAGCTTTTGAAAATATACCTTGAACATTTATATGCATTATAATGTATAATAGTTTTCATTCATAGAGTATATTTAGGATTTGGACGAGGCTGTATGTAAGAATTCAAGTAACTCTTTTTAGACCTGCAATATCCTTCATGTAAAAAAAAATTCATATAATATGTATTGTATGGGTCAATGCTTGTATAATTGTTTGACCTGCTTGACACTTTCTTGCAGATTCTATTCCATCTAATAAATCGATGCTCTTGCAAATCCTTGTAACAATCAAGGCCATGCCATTGTACTGCGTCCTTCCAACTTTTGCTGAATATGTGGTTGAACATGATTGGACAAAATGCTATCCAAGGGTACTCGATGTCGGATGGCCTGCTTATGCCTTTCATATAATTACTTATCTTACCTTTATAGAGTTTTGTATCTATTGGATGCATAGGGGACTGCATGATATAAAGCCTCTTTACAAGTATCTTCATGCTAAACATCATATCTACAACAAGAAAATTACTCTCTCCCCCTTTGCTGGTAAGTTCTTAATCTGCTTTCTTAAATTTTGCAGCCACTTGCGATTCATCTTGCCATTCATGCCAAAAGATACTTGTTTGAAAAGATTGTATCTCATATCTGATTCTCGTTTGATTTGCTCAAGATCAGTTTGACTTTGTATCAAAACCCAAAATACGAACCAATCTCAATAAATCTCTTTCACTAATTGTCTTTTACAGGAAACAAACAAATGATTATCAAATGAAAAAAAGTGTCATGCTTTTCAATTCCATTGTGACGAATAGGAATACAGTTGACATATGACTATAGTTTGATTAGGAAGTTTACAATCCGAAAATAAACTGATGCTAAGGAAACTTCACTGGATTTTGAAGTAGTTGGGACAATGATCTGTTAAATTGCTTCATTTCCTGTTTGCTGCTTCTGACTTAGTACTAAAGTTCTTTGGATGTTTCTTGAAAGATTCTCTAGTGAATGGTCTTTTTGAATGGGCAGGTTTAGCATTTCACCCTATGGACGGGATATTGCAGGCAATACCTCATTTGTTTGCTTTATTTCTCATTCCAACCCATTTTAGAACACACATTGTGCTGCTATTCTTCGAGGTTGTATGGACAGCAAACATTCACGACGGCATCCACTCACGAATGTGGCCAGTTATGGGTGCTGGCTACCACACAATTCATCATACAAGATACCGCTACAATTATGGCCATTACTCCATATGGATGGATTGGATGTTTGGGACGCTCCTTGATCCAATGGATATAGAAGCCAAGGGGTCGTGATTGGTCATTGCTTTGACATCAACTGCTTAATTGTTATGGCGCTTGATGATTCTTTGTGTTCAATGTAAATCAAGTTAGTTAACGATTAGATCAGGTCTTCTAGTATGTTACAGAATAAGTTGTCATTCCAGGGTAATTTGTGAAGCCATACATACCATCACATCACACATTCATTCTCAGTGTCCAGGAATCCACAAGGCCTGTGTGCTGCTATTGATAATGGTAAATGGTAAGTAAAACTTGTGGAGGCATTAGTTATATCTTTGTATATCATATTGAAATGAAAACTTATGTGAAAAAAATAGCCAATGATCATGTATGGGG ATAAATTCTCACAACTCATTTCAATTCCAACTCAGACTCTCTTTGTTTTTCCCTTTTTGCTCTTCTTCACTTCCTCTGGTTCTGATTTGACTGTTTCTTTTCTGTTTTCCGGTGGCTATTTTCGACAGCCATGGGCGGTGGGCCGCCGTATTTGGAACTCTTTGTTGAGGAGACTAGTTTCTACAACCGCATTGTTTTGGGAACCATTTTTCCAAACTTTAGTTTAGACCCATTTCCTCATATTCTTCAAACTTGGCTTCGAAACTGCGTTGGTGGATTCTTAATTTACTTCTTTTCTGGCTTTCTTTGGTGCTTTTACATCTATTACTGGAAGCGCAATGTCTATGTTCCCAAAGATTCTATTCCATCTAATAAATCGATGCTCTTGCAAATCCTTGTAACAATCAAGGCCATGCCATTGTACTGCGTCCTTCCAACTTTTGCTGAATATGTGGTTGAACATGATTGGACAAAATGCTATCCAAGGGTACTCGATGTCGGATGGCCTGCTTATGCCTTTCATATAATTACTTATCTTACCTTTATAGAGTTTTGTATCTATTGGATGCATAGGGGACTGCATGATATAAAGCCTCTTTACAAGTATCTTCATGCTAAACATCATATCTACAACAAGAAAATTACTCTCTCCCCCTTTGCTGGTTTAGCATTTCACCCTATGGACGGGATATTGCAGGCAATACCTCATTTGTTTGCTTTATTTCTCATTCCAACCCATTTTAGAACACACATTGTGCTGCTATTCTTCGAGGTTGTATGGACAGCAAACATTCACGACGGCATCCACTCACGAATGTGGCCAGTTATGGGTGCTGGCTACCACACAATTCATCATACAAGATACCGCTACAATTATGGCCATTACTCCATATGGATGGATTGGATGTTTGGGACGCTCCTTGATCCAATGGATATAGAAGCCAAGGGGTCGTGATTGGTCATTGCTTTGACATCAACTGCTTAATTGTTATGGCGCTTGATGATTCTTTGTGTTCAATGTAAATCAAGTTAGTTAACGATTAGATCAGGTCTTCTAGTATGTTACAGAATAAGTTGTCATTCCAGGGTAATTTGTGAAGCCATACATACCATCACATCACACATTCATTCTCAGTGTCCAGGAATCCACAAGGCCTGTGTGCTGCTATTGATAATGGTAAATGGTAAGTAAAACTTGTGGAGGCATTAGTTATATCTTTGTATATCATATTGAAATGAAAACTTATGTGAAAAAAATAGCCAATGATCATGTATGGGG ATGGGCGGTGGGCCGCCGTATTTGGAACTCTTTGTTGAGGAGACTAGTTTCTACAACCGCATTGTTTTGGGAACCATTTTTCCAAACTTTAGTTTAGACCCATTTCCTCATATTCTTCAAACTTGGCTTCGAAACTGCGTTGGTGGATTCTTAATTTACTTCTTTTCTGGCTTTCTTTGGTGCTTTTACATCTATTACTGGAAGCGCAATGTCTATGTTCCCAAAGATTCTATTCCATCTAATAAATCGATGCTCTTGCAAATCCTTGTAACAATCAAGGCCATGCCATTGTACTGCGTCCTTCCAACTTTTGCTGAATATGTGGTTGAACATGATTGGACAAAATGCTATCCAAGGGTACTCGATGTCGGATGGCCTGCTTATGCCTTTCATATAATTACTTATCTTACCTTTATAGAGTTTTGTATCTATTGGATGCATAGGGGACTGCATGATATAAAGCCTCTTTACAAGTATCTTCATGCTAAACATCATATCTACAACAAGAAAATTACTCTCTCCCCCTTTGCTGGTTTAGCATTTCACCCTATGGACGGGATATTGCAGGCAATACCTCATTTGTTTGCTTTATTTCTCATTCCAACCCATTTTAGAACACACATTGTGCTGCTATTCTTCGAGGTTGTATGGACAGCAAACATTCACGACGGCATCCACTCACGAATGTGGCCAGTTATGGGTGCTGGCTACCACACAATTCATCATACAAGATACCGCTACAATTATGGCCATTACTCCATATGGATGGATTGGATGTTTGGGACGCTCCTTGATCCAATGGATATAGAAGCCAAGGGGTCGTGA MGGGPPYLELFVEETSFYNRIVLGTIFPNFSLDPFPHILQTWLRNCVGGFLIYFFSGFLWCFYIYYWKRNVYVPKDSIPSNKSMLLQILVTIKAMPLYCVLPTFAEYVVEHDWTKCYPRVLDVGWPAYAFHIITYLTFIEFCIYWMHRGLHDIKPLYKYLHAKHHIYNKKITLSPFAGLAFHPMDGILQAIPHLFALFLIPTHFRTHIVLLFFEVVWTANIHDGIHSRMWPVMGAGYHTIHHTRYRYNYGHYSIWMDWMFGTLLDPMDIEAKGS* Homology
BLAST of CsGy4G017510 vs. ExPASy Swiss-Prot
Match: Q9ZT29 (Delta(7)-sterol-C5(6)-desaturase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 1.6e-114 Identity = 183/266 (68.80%), Postives = 218/266 (81.95%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy Swiss-Prot
Match: Q39208 (Delta(7)-sterol-C5(6)-desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=STE1 PE=1 SV=2) HSP 1 Score: 390.6 bits (1002), Expect = 1.5e-107 Identity = 176/267 (65.92%), Postives = 209/267 (78.28%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy Swiss-Prot
Match: Q9M883 (Putative Delta(7)-sterol-C5(6)-desaturase 2 OS=Arabidopsis thaliana OX=3702 GN=HDF7 PE=3 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 1.8e-100 Identity = 164/261 (62.84%), Postives = 202/261 (77.39%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy Swiss-Prot
Match: Q9EQS5 (Lathosterol oxidase OS=Rattus norvegicus OX=10116 GN=Sc5d PE=1 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.4e-27 Identity = 79/234 (33.76%), Postives = 128/234 (54.70%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy Swiss-Prot
Match: O88822 (Lathosterol oxidase OS=Mus musculus OX=10090 GN=Sc5d PE=2 SV=2) HSP 1 Score: 119.8 bits (299), Expect = 4.9e-26 Identity = 77/234 (32.91%), Postives = 128/234 (54.70%), Query Frame = 0
BLAST of CsGy4G017510 vs. NCBI nr
Match: XP_004150515.1 (delta(7)-sterol-C5(6)-desaturase [Cucumis sativus] >KGN54626.1 hypothetical protein Csa_012304 [Cucumis sativus]) HSP 1 Score: 597 bits (1538), Expect = 6.99e-216 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CsGy4G017510 vs. NCBI nr
Match: XP_008444093.1 (PREDICTED: delta(7)-sterol-C5(6)-desaturase-like [Cucumis melo]) HSP 1 Score: 589 bits (1519), Expect = 5.52e-213 Identity = 271/273 (99.27%), Postives = 271/273 (99.27%), Query Frame = 0
BLAST of CsGy4G017510 vs. NCBI nr
Match: XP_038894105.1 (delta(7)-sterol-C5(6)-desaturase-like [Benincasa hispida] >XP_038894106.1 delta(7)-sterol-C5(6)-desaturase-like [Benincasa hispida] >XP_038894107.1 delta(7)-sterol-C5(6)-desaturase-like [Benincasa hispida]) HSP 1 Score: 565 bits (1456), Expect = 2.23e-203 Identity = 253/274 (92.34%), Postives = 264/274 (96.35%), Query Frame = 0
BLAST of CsGy4G017510 vs. NCBI nr
Match: XP_022980690.1 (delta(7)-sterol-C5(6)-desaturase-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 551 bits (1419), Expect = 9.79e-198 Identity = 247/274 (90.15%), Postives = 260/274 (94.89%), Query Frame = 0
BLAST of CsGy4G017510 vs. NCBI nr
Match: XP_022956224.1 (delta(7)-sterol-C5(6)-desaturase-like [Cucurbita moschata] >KAG6581752.1 hypothetical protein SDJN03_21754, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026198.1 hypothetical protein SDJN02_12697, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 549 bits (1415), Expect = 3.99e-197 Identity = 245/274 (89.42%), Postives = 260/274 (94.89%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy TrEMBL
Match: A0A0A0L3B9 (Fatty acid hydroxylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G409800 PE=3 SV=1) HSP 1 Score: 597 bits (1538), Expect = 3.38e-216 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy TrEMBL
Match: A0A1S3BAC7 (delta(7)-sterol-C5(6)-desaturase-like OS=Cucumis melo OX=3656 GN=LOC103487532 PE=3 SV=1) HSP 1 Score: 589 bits (1519), Expect = 2.67e-213 Identity = 271/273 (99.27%), Postives = 271/273 (99.27%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy TrEMBL
Match: A0A6J1IX84 (delta(7)-sterol-C5(6)-desaturase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479986 PE=3 SV=1) HSP 1 Score: 551 bits (1419), Expect = 4.74e-198 Identity = 247/274 (90.15%), Postives = 260/274 (94.89%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy TrEMBL
Match: A0A6J1GYF7 (delta(7)-sterol-C5(6)-desaturase-like OS=Cucurbita moschata OX=3662 GN=LOC111457984 PE=3 SV=1) HSP 1 Score: 549 bits (1415), Expect = 1.93e-197 Identity = 245/274 (89.42%), Postives = 260/274 (94.89%), Query Frame = 0
BLAST of CsGy4G017510 vs. ExPASy TrEMBL
Match: A0A6J1KDR9 (delta(7)-sterol-C5(6)-desaturase-like OS=Cucurbita maxima OX=3661 GN=LOC111492934 PE=3 SV=1) HSP 1 Score: 534 bits (1376), Expect = 1.70e-191 Identity = 240/274 (87.59%), Postives = 256/274 (93.43%), Query Frame = 0
BLAST of CsGy4G017510 vs. TAIR 10
Match: AT3G02580.1 (sterol 1 ) HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-108 Identity = 176/267 (65.92%), Postives = 209/267 (78.28%), Query Frame = 0
BLAST of CsGy4G017510 vs. TAIR 10
Match: AT3G02590.1 (Fatty acid hydroxylase superfamily protein ) HSP 1 Score: 367.1 bits (941), Expect = 1.3e-101 Identity = 164/261 (62.84%), Postives = 202/261 (77.39%), Query Frame = 0
BLAST of CsGy4G017510 vs. TAIR 10
Match: AT1G69640.1 (sphingoid base hydroxylase 1 ) HSP 1 Score: 51.2 bits (121), Expect = 1.5e-06 Identity = 42/154 (27.27%), Postives = 72/154 (46.75%), Query Frame = 0
BLAST of CsGy4G017510 vs. TAIR 10
Match: AT1G14290.1 (sphingoid base hydroxylase 2 ) HSP 1 Score: 48.1 bits (113), Expect = 1.3e-05 Identity = 42/156 (26.92%), Postives = 71/156 (45.51%), Query Frame = 0
BLAST of CsGy4G017510 vs. TAIR 10
Match: AT1G02205.2 (Fatty acid hydroxylase superfamily ) HSP 1 Score: 48.1 bits (113), Expect = 1.3e-05 Identity = 45/151 (29.80%), Postives = 70/151 (46.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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