CsGy4G016940 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G016940
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTranscription factor IIIB 90 kDa subunit-like isoform X3
LocationGy14Chr4: 21935256 .. 21944909 (+)
RNA-Seq ExpressionCsGy4G016940
SyntenyCsGy4G016940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATCGAAACCCTCAACCCTCACACAGTTCTGGCATCCACCCTCAAATTTCCAACCATCACATCCCGTTTCTGAACGCCGCCAAGGTGGCCGCTTTGGTGGTCGTGGAGGCAGAGGCTTCCACGATGAGGATCTTTCCATCTAAAGTTGTTGGTTCATATCTACCATTATTTTTCTTTCTTTTTTATTGAAACTGTCTATCCACAGAATTAGACTGTTTACCATACATACAATATTGTTTCTGAATTAGAATTAGATATACTACAGATAAGGATCCTTTTGTAAGTTTTTTTTTTTTTTTTTTCATGTTTTCTCGTTAATATATTGGGGTTTATCAGGTTTCTTTAATTAAAATAAAATTTTATCGAGTTTAGGTTTTTCTTTGATTTTAAAGGAAATTATGGTCATAGAGATTCTTTTAGCTAAAGGGTGTTTTTTAGAATTTTTATATGATCTTTTTTTCCTAAGAAGTTCCTGCTACTAATTAACGTTTAGGTTTAATGAATTTTTAGTAGGTCTTATTTTTCCTTTTGATGTTACTTGACTTCCCATTAGTATTGATAATAACATTAGTTGAATAAGAAGAATTATTAGTACGCTGATATTTGTCGTGTAGTTTAATAAGTTGACACGAACTTAATTAAGGTTCAACATGGATAAATGTAGATTCTCAAAAGTTCCTAAAAATGGTTATCTCAGAGGATTCGACAATCAGTTACAAAATCTCTCCTCCAAATTCATATGGAGTTGTGGTTCTTGGTAGTACTTTTGCTTGATTACATGACGGTCACGGTCTTTTTCTTAAGGTATATCTCCTCTTCATTTTGAATGTTTTTTTTGTTATTTGTTGAGATATGGTAGATGGTGGAATTCAAAATGCAGCAAAGCTCGGAAAGGATCCGATTTGGATCGGAGTTTGTGATGGTCTATGCTAAGCAAAAAAAAAGGTCTCAACTTCATTTCCGTTGAATTTCTTGTTGCTTTATCTTTTTCAATCTTCCTTAAATGTATGAAGCGTTTGATGAACTTTCACTCAGTTCTAGATTACCTGATTTTAGTTTTAACAAATTTGTTCAATACGTGTTTAACAAATCTTTAATGTCTTGTTTGTTAGTTTTACAACATATTATGTGTCTGTTCACGTGATCAGCACAAAGTTCGTCCTACAGAGAATTCTCTGATTGGTAACATAAATTTTTTTCTCTGATCGGTAAAAATAAAAAAGAGAGACAATCTGCAACCTATTACAAGTGCTTTAGATGGTTATTTCTTTGATATGATTTTTAAAGAACAAATAATGGTAAATTATGTCTTTGTGCAGGCCCTATCACAAAAGAAAGAATAAATATTGATCCAACATCTGCACCATTTACTAAAGATCTAAGAGATCTCGAGGGACTTAGTGAAGGAGTGGTAAGCTTTCTCAAGCTCCGTTCATGACCAATAAACTAGTATGTGCATATTTTTTTGGCATTTGGTCACCCTTTTTGCTTCTATAGTCTTTTACTCCATTATTATTTATTTATTTTGGTGGGTTTGGGAAAGAAAATATTTTACAGCCGTTTTTTTATGGGAACTATTATTGGTCCTTTTCATTTTTATTCTCATGTTTAACTGGTTATAAACCTGAAATAGGAGAAGCTAAAACTAATGTTTGAAAAAAGGGTTCTGATACATATATTTATTAGAATTTATAAAACTAATGTTTGAAACATATTATTATTCTAATAAAAGATTCTTGGAGGATTACTCGTTGAGGCTCTTAGGTTACATCAATTTGGTTTTAGAGTGACCACCTGAACCGCCAATGTAAGACTGAAAATGATGGTTTTTAGTTTATTTAAGGCACCATCTAATAAGACCAGTTTTGACAAAGACTCAAGATAAGGTAACACATATCTATCAATAGGTTGACCCAATGGTTTCTCAAGGTGATATCAGTTCCATCATCAATCCAAAATTGAAAGAAGATTTTGAGGTGAACGCCATTTGGAAAGTGGTTGAAATAGCAATGTCGTATGCATATCTCACATTTACAAATAGGGTCAACCATGAGTCAAGTTGTGATTGATTTGAATGAATGTTGGAAAATGGAGTTAGCTCAGAGTAACAACAATATCATCAACCTAAATTCGTAGTTGAAGATCATGTTTCTTTGTTTGGTCCAAGATAGTAGACAACTAACCATCACCACATTGTCAGATAATTTCTTATGTATTATATTAGACTGAGATTCTTTAGATTTTGTACATGAAAAAAATCATCACCATAATACCATTTTTTTTATTAATCTCTCAACCAGCTAAAACTAGAACCAATCTTTTATGTGTATTTATTTGCTAGAAGGTCATTCATTAATTTTTTTTTTTTATTGATAAGATAGTTTATATACAACGTTGTATAAGGAAACTAAACATAGATGAATAATGTTCTGAATTTGTTATTTGAGTGGACATGTTACTGGATTTTGTCATCCCAAAATGTTTTGGATATGCTATGGTGGTCCCATATGCAAGTGAGAAACTTTCTATGGCTTACATGTTCGGTTCTCGGTCTTGTCATTTTCTACTTATCTTTTTCCAATCAATTTTCTGGAACCATCAAAGCAGTGGTCGTTTGTGTTTGAAGTAACCTCATATTTCTTTCGATGCAGCTTATAATAATGTCCAACTTCCCCTTTTGCACATTTTGCTCACGTCCCTATGATCATATTAGGCAATTATGTTGAGACAATGTTTTTAGTTTTTAGTTTTTATTATTATGTAATTTCTGAACCTACAAACATTAGTATATTGTCGACGTTGGGGTATAACGTCGGTATTAATATATTGCTGACATGTTGACCTTATCGACAAAACACCCGTCGACCGAAAGTCAACGTCGACGTCTTCATGTTCCTATGTTGGTAGTACCTCTTATGACACGCTATTTACGACGCTCTTGATGACATGCCCTTCTGCATCATGGTAGTCTTCACCGACGCACTATAGCTTTCTGGCGACGCGCGATTGCGTTGACAAAACCCCAAATTCTTGTTGTGGCAGAAGTTGAATATTCGGCTCTTGCCGTCACTACATGTGAAGTTGTATGGCTTCACAACCTTCTTAATGAACTACAAATTAAAGCTCCTTCTCCAGCCCTCTTGTTTGGTGACAATCAAGTTGTCATCTACATTGCAAACAATCCCACGTTCCATGAAATAACCAAACATATCGAGTTAGATTGTCATTTTGTTCGAGATAGAATAATAGATGGATCTATCAAACTATTACCAGTTAGGTCTTCTAATCAACTTGCAGAGATTTTTACAAAGCCTCCTCTAGGAAACGTCCTTTTTTCATTAATAAATAATATGGGTGTCCAAGACATATTTTCCGATCTTGAAGAGGAGTATTAAATGGTTAAACATTTTGTTTTATTTTGTTAGTCAGTTTGATAACTTTCCTCGTTGTAACTAATTATTTCTCTCTCTCATATGTGTATAAACATATTTGAGCACATCATAAATAAAACGAGAAAGTCAATTATATTTTCTTAGTCTTCTAATACATGTTTTATTTATTATTGCATGAAAATTATTATTATTGTCGTTATGTAATTAATTTTGGTCAAATCTAACTTTGAGTATCTAAATTTAAATTGTATTGAAAGTATAGAAATTAAGATTGAACAATTAAAAGTATAGAGACTAAAATGATAGTTTAATCTTATATGTATGGATTTATTCAAGGTGTAGAACATATCGTCGTCTTTTCTAAGTTAATTAAGTTGTTCAATCGTAGTTTTGTTACTATTACATTTATAAACAACATGCTCACTTCTATATGTATTTATCAATATTTTTAAAATTAGGTTTGATCAAATTTTAAAAACTAAAAAAATATATATACAAACCATTCTAAAGAAAATTGTTTTTTCAAGGGATTGCTATAAAATAACATTATTTATTCAACTCTAAATTCAATGGAAGAAAAATAGTGGGTAGTTGAACAAACTATCACATTTATAAATTCCTTTAAATGGTTGTCTTGTCTCTCTTTCTCTCCATGATTCTTTATATGTTAATACATTATATGTTTTGAGTTTTAATTTATCATTTTCTTTTTATACTCTCAATTTATATTTATATCCATATCCTAACTAAGTATACTTAGTATGTATACGTAGTTTAGACTAATTATTGGGTTTTAGTCTAACTACACACACATATATAATATTATTGGCCGGTTTTAATTATTATTAATCTACTCCCATATCAAAGTATACCTTCTCATATCAAGTATTATATGGTATACTTTGATTATTCTAAAAAAACATGTAACAACCCAAATGCATCACATTAAAAGTTACATGCCTAAAAAAAAATTAACTAAATGTCCATAGTTCAAATCATTTTACGATCATTTATTTCATACTAGAAAATAGTTAGGTCCAAGTTAAACATGCATCGTCTAAGTCATATATAGTTTCAACTCTCCGTGACATACTATTTTTAATCACAAGGCCATCATCCTATACCGCCACACAATAGGTAAACTTAGATTTTAAAAAATGTTGAATGATAATTGAATTAGTGTGTCTGTTAAATCTCCAAACTTTTGATTTTGTGTTAATGTATAGAAATTTGGTTGCATTTTTTCAATATATATTTTTAAAAATACACAAACCTAGCTAATAATATTAGTTTCCATTCATTTTCTTTCGATCAATTTGATTTTTTGGTCGAGTGTTATTATGTTTTTGTTTTTTTTAACATCTTGTTTTTACAATATTAACAAGAAGTTGAACATCTATTTTTTATTTCATACTTTATAGTTTACTCACTAAATCATACTTCTATTGGTTGTAAGGCATGAGTATATGGAGAAAAAAACAATAGCTAAACTTAATGAATTGTTTAATAAAATAAATATAAGAACATTTGCAAAATTCACAAAAAAAAAATTAATTATGATAATAGTGTTTATGTCATAATATTTTCTAAGTTTACAAAAGTAGCAAATTTAAAAATGATAATCATCTGATAGTCCTATGATTACTATCTGATAGTCGTCTGATATCACTAATTTTGTCATATTCGTAATATGCAAAAAAATTGTGTCATGAGCAATTTTTTTCTAAATGTTTTGGTCATTTGATGCAATTTCTCATAAATAATACACCGACCAAAACTAAAATAAAATAACACGACAATGAGTTTCTTCGTGCTAATGCCAAACAAACAACCATTAATTGATAAAAATGTAAAATTTGACTCTATATTTCAATATATGTATGTGACTTTTTAAAAGTGACTTAATAACTTGAAAGTACGGAAATAAAAATAAAATAAACATATGGTTGTCATAGTCTAATGAAATTCAAACCTATAATAAACTACAAATTAAATTAAAATGATTTAACTTTATTTAATTATTTAATTTTTTTTCTTTTGTCCAAACAATGTATACAGCCAAGTGGAAGGAGACATATTTCATCCATGTATCTAAACATTTATTGTAAACTATTTTTAAGTATAAAGAAATTATTATAAGCATTTATAAAATAAATTCAAACAATTTGTTGAAATTATTTACATATTTTTTATTTTTTATTATATTTATTATGATTGTGCAGAATATAATTGGGAGCGTATATTTCTTCTTCTTCAACAAATGGTGTTGTTATTATTGTTGTTGTTGATACTTATTTGTTTCTTGGAGTTTAGATTTTAACCATAAGTAGGGTTGGCAGAAGTTTAAATTTCATATTAATTGAATTACATATTACATATACGAAATAACTCAAGTGAATAAATTTAATATTAGTAGTAATAATTGAAGCAAATAATAGTGTACAGTGAAGTTAAATGCAGTAAATAATTAGGGTTGATAGTTAATTCAGCCTCTATGTAGACCTAATTAGAAAACTATATATATGCCAGCTTTCTTTTAGTGTTAAAGTGCATTCCTAGGTTAAAAATCAAACAGTAAGTAATGATATAATATCCTCCAGTTGGAAGTTTTAATTTTCATTTTTCACATTTTTGTTGTACCAAAAGACATAATACTAATACTTCAATATTTTACATATATTCATTTCCATAGTATACTTTTAAAGGTGGATATATAGTCTATAATAGACATTTGTGTTGATTGTCTTCAAATGAATTAACATTGCATCATGATCGTGACTAATAACTTTTTGCATTAGTCAAGGTCGCTCTTTCTGGCCTTTTGCATATTTGATCTCTCGCACCAGAAAGATAACTAATTACTCTAGTGTTGTGTGAGTATAAATTCACTTTGATATCTAAGTTAATACAAAAGTGTTTAGTTTTAATTAAAAACTCAAGTGTATGTACCTCACCGAAGTGGTTGAATGAAGCTATATCAATAAATTACCGATCCATTATCATATACTTATTTTGAACATGTGCAATGTTGGTTGTGTCACCATTGGAGTTAAAAATATTGAGATATATTGCAAGGTAGATTGAAGCCGCGATGAGCTCAATTTGCTTATTTCCTCGTCAATGGAAGCAAAATCAACCTTAACTAACCCAAAACCCTTGCCCCCTACTTTATAGACAATCACAATGTTAGATACATAACTAAATTTAACGTCTATCTACCAACTTAAGTTTTTAGGTCAAATTATGTTCTTTAAGATGGTATTAGAGTGGATCATTTGAGGAGATTTTGTGTCGAAGCCTCCACATTGCTAATTTCCTTCTCAATTGATATTAAATTTTAGTTTTGGGTCTTTTTCATATTTCTAGCTCACGAGTGAGAGGAGTATTAGATACATGCATACTTAAATTAACTCTGTTTAGTTATGCTTAGTATCTATTGTCATGTGTCATTATGCTTAGTGTTCTTTGTGTCACTCTCATCTACATCCAACTCTTTTGTCATGTATCTTGAAGATATCAACACTTAATAATCATCTAATTCATCCATGTTTGTCAAACTGCCTATAAATAGTGAGTTTTGTAATACACACGTATTGGTGAAATTTCCATACAAATGGAGATAGTAAATTTTGGAGAGAATTTTTTAACTTATTATTTTCTTAATTTAGTATTTATTTATTTATATATTATTTATTATTATTTGAATATTATATTTTTCTTTTCTTTTTTTCTCTATTATACCTCATTTTGTTAAACTTTTCTATATTTACCCTCCATGAAACAAAGTCATTAAAAACAAAACTTTCTACCAATGGTAAATATCTTTCTACTTTGTCAAAAATAGGAAAAATAAAATAATAATGGGCCGGTCCATGCACTAGGCCTTATATTGCTGGGCCCTTTTCTGAGATGAAGGTCGAGTCCGTTTTTCGCTCTTCTGCTTGAAGTTACAAGTGATTTTCCTTTAGGCGGCAACGGATCGTCGGCAAAATTCCGGATTGCGTTAAATCACTAACCGGAGGAACTAGTGCGTGTTTTTCTTCTCGGCGTCGAGTAATTTGGCTGCGCTATACACATTCTGATTCCTTGATCAACATCGTAAGTATTCCATCAAGTTATCATGCTTACGATCTTTAGTGTTGTGTATGGAAATTTAGGATGGATTGTTCTTGGATTCATCTTTTTGTTTATCGTTCGCTTCTCGTTATTGGACCATATTTAGGTTACATCACCGTTTTTAGTTCTTTCAATTATCTATCTAGGTTCGCTGTAAGATCAAGCAATGATGAATTGAAGCTTTAATATGTTGCCTTTTTGTTCTTGAGATGATATGTTTCTGGCTAGACTTATTGTTTAGTTTGTGCGAAAGGCAGTGTGTAACTGGATCTTGTAATTTCAGATTTGTTGTTTTTTGTATTTTTTTTAACAACGGTGGCTTTCTGGTACTGGTAGATTCTCATTGTCCATTGTTTAAAAAGATATAACATCCAGCTATTGAAACTGTTTGCATTTTGACATTGGTAAATGCTCTTGTTGTTTTCAGATGAAAACTGCTGATGCATCTTTATTCGGCATGTTCTTCAAACACAAAGATAAAAGTTCTCCATCCGATGATGATTCAGAGGACCTTGGTGATGTTTTTGATAGTGAGGTACCCGACTAATTTAATTGCATTAGCCTTTTGTTTCTTTTTATTTCTTCTGGTGTTTGTATGGTGTTTTAACCGTAGTTTTTCACAAATCATAGGTGAACTCTTACCTAAACAACAGGAAGGAGGCACATTATAAAAAGATTATTTGGGAGCAAATTAACAAAGACTATCTTCAGGTTAAAGGCTTCTTGCCCCTCTTAATATAACCCTTTGATTGCTTCAAAAAAATCTACGATTATACTTAACACTTGAACAAAGTGTTTTATGTTTCAATCATAATTTGGTTTCTAAAAAAGTGATATGCATGATTTTCAGGACCAAGCAGCTAAGAAACAAGGCCTTAATGTCGTTGGAGCTTCAGCTGTGGTTAAAAAATCAAAGAAGGTATTTAAGTAACTACAGTTCGTGACTTTGTGTTGAACAAGAAGTCCCTTATCCTGAAAAACATTGGATAGGAATTTTGCATCTTTACAATTTATAGTATGATTTATGTTTTCTCATTCTGTTGGAAAAAAGCAGAGGCAAAGGAAAACAGAAGCTCCAATAAACATGCCTGCTCAAGCCGATACAGGAACTACACGTGAAATGCAAATTAAAAAGGTATATCAGTGAGATAAACTAATTAATAGATTAATTGGATGGGATTGTGATCTCTAATTTTAGCCCAATGGATCTGTTCTAATCTCAATTTTAATCTCAATTTTCGTGGTACTTTCCAATTCTATGGGGCCAACTTCCACTCTTAATTATTAATTATTGTCTTATTGGTCCTCTATGGACTACATGGATGTTCTTTTATGAAATTTTTCATTCATATATCTTTTTCCAAATCATTTTCTTAAGAAACGCTTGAGTATAGGGTTCAAGAACCATCCACATTATTGTTCCGGGGTCATTTTCGTTTCGGTGTGGGGGAAGAGTATTTATTTTCATAATTCCATGGTTTTTGTGCAAGCTAACTTAGTTTGTTTGGTTGATTTACATCTATCCACTCATTTGCTTATTTCCCACATTCATTCTTCGCAGAGGCTCAGTTCAAAATTCAACTTTGACGTGTTGGACAAACTCTTCTCTGATACAGTATGTTTATCTATGTTTTCTTTTGAAAAAAACTCTTCATTTCTTCTTTAATGTTTTGTTATTTTCATGTTCGAATGCGACTGTAATTTTTTCATCAGTACAGGAAAATAATCCACTCTCAAACAAAGGATGGAAAGAAAGGAGTTTAACCTTCTTGATTATTTCGATTACTACACATGGTTAGTATAACTGCCTAATAATTCGTGCAGCCTGCACCTGATTCAAGCGAAAAGCAGGGAGCCTCAAGTTGTAAAGAGAATAGTTCATCTGGTCAAATCCATTGTAGGAACGAGCTGGAAGACGACTTCGAAGACAATCTGAATAGTTCATCTGGTCAAATCCATTGTAGGAACGAGCTGGAAGACAACTTCGAAGACAATCATACTGAGACGATGTTTGAAGAAAACTTCGACATTGAAGGTGAAGAAGATCCCACAGAAACTTATGGTAATGAGTATTATGATTTCCAAGATGAGGAAGAGTATGGCTACGGATACAATGACTATGGTGGTGAGGAGGAATATTAG

mRNA sequence

ATGCAATCGAAACCCTCAACCCTCACACAGTTCTGGCATCCACCCTCAAATTTCCAACCATCACATCCCGTTTCTGAACGCCGCCAAGGCCCTATCACAAAAGAAAGAATAAATATTGATCCAACATCTGCACCATTTACTAAAGATCTAAGAGATCTCGAGGGACTTAGTGAAGGAGTGGTTGACCCAATGGTTTCTCAAGGTGATATCAGTTCCATCATCAATCCAAAATTGAAAGAAGATTTTGAGGTGAACGCCATTTGGAAAGTGGTTGAAATAGCAATGTCGCGGCAACGGATCGTCGGCAAAATTCCGGATTGCGTTAAATCACTAACCGGAGGAACTAGTGCGTGTTTTTCTTCTCGGCGTCGAGTAATTTGGCTGCGCTATACACATTCTGATTCCTTGATCAACATCATGAAAACTGCTGATGCATCTTTATTCGGCATGTTCTTCAAACACAAAGATAAAAGTTCTCCATCCGATGATGATTCAGAGGACCTTGGTGATGTTTTTGATAGTGAGGTGAACTCTTACCTAAACAACAGGAAGGAGGCACATTATAAAAAGATTATTTGGGAGCAAATTAACAAAGACTATCTTCAGGACCAAGCAGCTAAGAAACAAGGCCTTAATGTCGTTGGAGCTTCAGCTGTGGTTAAAAAATCAAAGAAGAGGCAAAGGAAAACAGAAGCTCCAATAAACATGCCTGCTCAAGCCGATACAGGAACTACACGTGAAATGCAAATTAAAAAGAGGCTCAGTTCAAAATTCAACTTTGACGTGTTGGACAAACTCTTCTCTGATACACCTGCACCTGATTCAAGCGAAAAGCAGGGAGCCTCAAGTTGTAAAGAGAATAGTTCATCTGGTCAAATCCATTGTAGGAACGAGCTGGAAGACGACTTCGAAGACAATCTGAATAGTTCATCTGGTCAAATCCATTGTAGGAACGAGCTGGAAGACAACTTCGAAGACAATCATACTGAGACGATGTTTGAAGAAAACTTCGACATTGAAGGTGAAGAAGATCCCACAGAAACTTATGGTAATGAGTATTATGATTTCCAAGATGAGGAAGAGTATGGCTACGGATACAATGACTATGGTGGTGAGGAGGAATATTAG

Coding sequence (CDS)

ATGCAATCGAAACCCTCAACCCTCACACAGTTCTGGCATCCACCCTCAAATTTCCAACCATCACATCCCGTTTCTGAACGCCGCCAAGGCCCTATCACAAAAGAAAGAATAAATATTGATCCAACATCTGCACCATTTACTAAAGATCTAAGAGATCTCGAGGGACTTAGTGAAGGAGTGGTTGACCCAATGGTTTCTCAAGGTGATATCAGTTCCATCATCAATCCAAAATTGAAAGAAGATTTTGAGGTGAACGCCATTTGGAAAGTGGTTGAAATAGCAATGTCGCGGCAACGGATCGTCGGCAAAATTCCGGATTGCGTTAAATCACTAACCGGAGGAACTAGTGCGTGTTTTTCTTCTCGGCGTCGAGTAATTTGGCTGCGCTATACACATTCTGATTCCTTGATCAACATCATGAAAACTGCTGATGCATCTTTATTCGGCATGTTCTTCAAACACAAAGATAAAAGTTCTCCATCCGATGATGATTCAGAGGACCTTGGTGATGTTTTTGATAGTGAGGTGAACTCTTACCTAAACAACAGGAAGGAGGCACATTATAAAAAGATTATTTGGGAGCAAATTAACAAAGACTATCTTCAGGACCAAGCAGCTAAGAAACAAGGCCTTAATGTCGTTGGAGCTTCAGCTGTGGTTAAAAAATCAAAGAAGAGGCAAAGGAAAACAGAAGCTCCAATAAACATGCCTGCTCAAGCCGATACAGGAACTACACGTGAAATGCAAATTAAAAAGAGGCTCAGTTCAAAATTCAACTTTGACGTGTTGGACAAACTCTTCTCTGATACACCTGCACCTGATTCAAGCGAAAAGCAGGGAGCCTCAAGTTGTAAAGAGAATAGTTCATCTGGTCAAATCCATTGTAGGAACGAGCTGGAAGACGACTTCGAAGACAATCTGAATAGTTCATCTGGTCAAATCCATTGTAGGAACGAGCTGGAAGACAACTTCGAAGACAATCATACTGAGACGATGTTTGAAGAAAACTTCGACATTGAAGGTGAAGAAGATCCCACAGAAACTTATGGTAATGAGTATTATGATTTCCAAGATGAGGAAGAGTATGGCTACGGATACAATGACTATGGTGGTGAGGAGGAATATTAG

Protein sequence

MQSKPSTLTQFWHPPSNFQPSHPVSERRQGPITKERINIDPTSAPFTKDLRDLEGLSEGVVDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMSRQRIVGKIPDCVKSLTGGTSACFSSRRRVIWLRYTHSDSLINIMKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKDYLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTGTTREMQIKKRLSSKFNFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRNELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY*
Homology
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BLAST of CsGy4G016940 vs. ExPASy Swiss-Prot
Match: Q9P6R0 (Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=brf1 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 2.9e-05
Identity = 33/109 (30.28%), Postives = 55/109 (50.46%), Query Frame = 0 

Query: 163 DDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKDYLQDQAAKKQGLNVVGASAVVKK 222
           ++   L DV D E+   L ++ E   K  +W ++NKDYL ++ AK   L       +V++
Sbjct: 381 EEEVTLEDVDDDEIEDILLDKDEILTKTQVWMELNKDYLAEEEAKNLKLQEDLKKGIVRQ 440

Query: 223 SKKRQRKTEAPINMPAQADTG--TTREMQIKKRLSSKFNFDVLDKLFSD 270
            +KR+R           ADT   + +EM  ++  S K N++ LD LF +
Sbjct: 441 PRKRRRYRPRDSTSDGIADTAAESAKEMMQQRAFSKKINYEALDMLFDE 489

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BLAST of CsGy4G016940 vs. ExPASy Swiss-Prot
Match: C0LGG6 (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana OX=3702 GN=At1g51890 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 5.0e-05
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0 

Query: 42  TSAPFTKDLRDLEGLSEGVVDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMS 97
           T+ P     R+   ++E V+  M++ GDI SI++PKL ED++ N +WKVVE+A++
Sbjct: 766 TNQPVMNKNRERPHINEWVMF-MLTNGDIKSIVDPKLNEDYDTNGVWKVVELALA 819

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BLAST of CsGy4G016940 vs. ExPASy Swiss-Prot
Match: Q9C8I6 (LRR receptor-like serine/threonine-protein kinase IOS1 OS=Arabidopsis thaliana OX=3702 GN=IOS1 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.5e-05
Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 0 

Query: 42  TSAPFTKDLRDLEGLSEGVVDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMS 97
           T+ P     R+   ++E  V  M+S+GDI+SI++PKL+ DF+ N IWKVVE AM+
Sbjct: 782 TNQPVIDMKREKSHIAEW-VGLMLSRGDINSIVDPKLQGDFDPNTIWKVVETAMT 835

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BLAST of CsGy4G016940 vs. ExPASy Swiss-Prot
Match: Q9FZB1 (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana OX=3702 GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04
Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 42  TSAPFTKDLRDLEGLSEGVVDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMS 97
           T+ P T   R+   ++E  V  M+++GDI SI++PKL  D++ N  WK+VE+A++
Sbjct: 762 TNQPVTDKTRERTHINEW-VGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALA 815

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BLAST of CsGy4G016940 vs. ExPASy Swiss-Prot
Match: C0LGR6 (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana OX=3702 GN=At4g29180 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 4.2e-04
Identity = 24/88 (27.27%), Postives = 42/88 (47.73%), Query Frame = 0 

Query: 61  VDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMS-----------RQRIVGKIPDCVK 120
           V+P +  GDI  +++P+L  DF  N+ WK VE+AMS             +IV  +  C+ 
Sbjct: 796 VEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCLA 855

Query: 121 SLTGGTSACFSSRRRVIWLRYTHSDSLI 138
           +           ++ V+  +YT + S +
Sbjct: 856 AELAREPKSNHEKKEVVKEKYTKTKSTV 883

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BLAST of CsGy4G016940 vs. NCBI nr
Match: KAE8649624.1 (hypothetical protein Csa_012863 [Cucumis sativus])

HSP 1 Score: 737 bits (1903), Expect = 4.20e-268
Identity = 374/375 (99.73%), Postives = 374/375 (99.73%), Query Frame = 0 

Query: 1   MQSKPSTLTQFWHPPSNFQPSHPVSERRQGPITKERINIDPTSAPFTKDLRDLEGLSEGV 60
           MQSKPSTLTQFWHPPSNFQPSHPVSERRQGPITKERINIDPT APFTKDLRDLEGLSEGV
Sbjct: 1   MQSKPSTLTQFWHPPSNFQPSHPVSERRQGPITKERINIDPTCAPFTKDLRDLEGLSEGV 60

Query: 61  VDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMSRQRIVGKIPDCVKSLTGGTSACFS 120
           VDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMSRQRIVGKIPDCVKSLTGGTSACFS
Sbjct: 61  VDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMSRQRIVGKIPDCVKSLTGGTSACFS 120

Query: 121 SRRRVIWLRYTHSDSLINIMKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYL 180
           SRRRVIWLRYTHSDSLINIMKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYL
Sbjct: 121 SRRRVIWLRYTHSDSLINIMKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYL 180

Query: 181 NNRKEAHYKKIIWEQINKDYLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQA 240
           NNRKEAHYKKIIWEQINKDYLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQA
Sbjct: 181 NNRKEAHYKKIIWEQINKDYLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQA 240

Query: 241 DTGTTREMQIKKRLSSKFNFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELE 300
           DTGTTREMQIKKRLSSKFNFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELE
Sbjct: 241 DTGTTREMQIKKRLSSKFNFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELE 300

Query: 301 DDFEDNLNSSSGQIHCRNELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEE 360
           DDFEDNLNSSSGQIHCRNELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEE
Sbjct: 301 DDFEDNLNSSSGQIHCRNELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEE 360

Query: 361 EYGYGYNDYGGEEEY 375
           EYGYGYNDYGGEEEY
Sbjct: 361 EYGYGYNDYGGEEEY 375

[Close]
BLAST of CsGy4G016940 vs. NCBI nr
Match: XP_004142699.1 (uncharacterized protein LOC101217202 isoform X2 [Cucumis sativus])

HSP 1 Score: 458 bits (1179), Expect = 4.69e-160
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 

Query: 140 MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 199
           MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD
Sbjct: 1   MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 60

Query: 200 YLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTGTTREMQIKKRLSSKFN 259
           YLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTGTTREMQIKKRLSSKFN
Sbjct: 61  YLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTGTTREMQIKKRLSSKFN 120

Query: 260 FDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRNE 319
           FDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRNE
Sbjct: 121 FDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRNE 180

Query: 320 LEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
           LEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY
Sbjct: 181 LEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 236

[Close]
BLAST of CsGy4G016940 vs. NCBI nr
Match: XP_011653794.1 (uncharacterized protein LOC101217202 isoform X1 [Cucumis sativus])

HSP 1 Score: 454 bits (1167), Expect = 3.26e-158
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0 

Query: 140 MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 199
           MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD
Sbjct: 1   MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 60

Query: 200 YLQDQAAKKQGLNVVGASAVVKKSKK-RQRKTEAPINMPAQADTGTTREMQIKKRLSSKF 259
           YLQDQAAKKQGLNVVGASAVVKKSKK RQRKTEAPINMPAQADTGTTREMQIKKRLSSKF
Sbjct: 61  YLQDQAAKKQGLNVVGASAVVKKSKKQRQRKTEAPINMPAQADTGTTREMQIKKRLSSKF 120

Query: 260 NFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRN 319
           NFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRN
Sbjct: 121 NFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRN 180

Query: 320 ELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
           ELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY
Sbjct: 181 ELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 237

[Close]
BLAST of CsGy4G016940 vs. NCBI nr
Match: XP_008444162.1 (PREDICTED: uncharacterized protein LOC103487591 isoform X2 [Cucumis melo] >TYK31660.1 transcription factor IIIB 90 kDa subunit-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 348 bits (893), Expect = 6.62e-117
Identity = 192/237 (81.01%), Postives = 201/237 (84.81%), Query Frame = 0 

Query: 140 MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 199
           MK ADASLF MF +HKDKSSPS+DDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD
Sbjct: 1   MKPADASLFSMFSRHKDKSSPSNDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 60

Query: 200 YLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTG-TTREMQIKKRLSSKF 259
           YLQDQAAKKQGLN+VGA+AVVKKSKKR+RK EAPIN PAQADT  TT EM IKKRLSSKF
Sbjct: 61  YLQDQAAKKQGLNIVGAAAVVKKSKKRKRKIEAPINKPAQADTEETTHEMLIKKRLSSKF 120

Query: 260 NFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRN 319
           +FDVLDKL  DTPAPDSSEKQGASSCKENSSSGQ HC NELEDDFEDN            
Sbjct: 121 DFDVLDKLLYDTPAPDSSEKQGASSCKENSSSGQSHCINELEDDFEDN------------ 180

Query: 320 ELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
                    HTET+FEEN DIEG EDPTETYGNEYYDFQ+EEEYGYGY+DYGGEEEY
Sbjct: 181 ---------HTETVFEENLDIEG-EDPTETYGNEYYDFQNEEEYGYGYDDYGGEEEY 215

[Close]
BLAST of CsGy4G016940 vs. NCBI nr
Match: XP_016899849.1 (PREDICTED: uncharacterized protein LOC103487591 isoform X1 [Cucumis melo])

HSP 1 Score: 343 bits (881), Expect = 4.54e-115
Identity = 192/238 (80.67%), Postives = 201/238 (84.45%), Query Frame = 0 

Query: 140 MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 199
           MK ADASLF MF +HKDKSSPS+DDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD
Sbjct: 1   MKPADASLFSMFSRHKDKSSPSNDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 60

Query: 200 YLQDQAAKKQGLNVVGASAVVKKSKK-RQRKTEAPINMPAQADTG-TTREMQIKKRLSSK 259
           YLQDQAAKKQGLN+VGA+AVVKKSKK R+RK EAPIN PAQADT  TT EM IKKRLSSK
Sbjct: 61  YLQDQAAKKQGLNIVGAAAVVKKSKKQRKRKIEAPINKPAQADTEETTHEMLIKKRLSSK 120

Query: 260 FNFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCR 319
           F+FDVLDKL  DTPAPDSSEKQGASSCKENSSSGQ HC NELEDDFEDN           
Sbjct: 121 FDFDVLDKLLYDTPAPDSSEKQGASSCKENSSSGQSHCINELEDDFEDN----------- 180

Query: 320 NELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
                     HTET+FEEN DIEG EDPTETYGNEYYDFQ+EEEYGYGY+DYGGEEEY
Sbjct: 181 ----------HTETVFEENLDIEG-EDPTETYGNEYYDFQNEEEYGYGYDDYGGEEEY 216

[Close]
BLAST of CsGy4G016940 vs. ExPASy TrEMBL
Match: A0A0A0L0J7 (BRF1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G363410 PE=4 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 9.82e-195
Identity = 280/287 (97.56%), Postives = 282/287 (98.26%), Query Frame = 0 

Query: 89  KVVEIAMSRQRIVGKIPDCVKSLTGGTSACFSSRRRVIWLRYTHSDSLINIMKTADASLF 148
           K++     RQRIVGKIPDCVKSLTGGTSACFSSRRRVIWLRYTHSDSLINIMKTADASLF
Sbjct: 10  KILRYIARRQRIVGKIPDCVKSLTGGTSACFSSRRRVIWLRYTHSDSLINIMKTADASLF 69

Query: 149 GMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKDYLQDQAAKK 208
           GMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKDYLQDQAAKK
Sbjct: 70  GMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKDYLQDQAAKK 129

Query: 209 QGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTGTTREMQIKKRLSSKFNFDVLDKLFS 268
           QGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTGTTREMQIKKRLSSKFNFDVLDKLFS
Sbjct: 130 QGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTGTTREMQIKKRLSSKFNFDVLDKLFS 189

Query: 269 DTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRNELEDNFEDNH 328
           DTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRNELEDNFEDNH
Sbjct: 190 DTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRNELEDNFEDNH 249

Query: 329 TETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
           TETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY
Sbjct: 250 TETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 296

[Close]
BLAST of CsGy4G016940 vs. ExPASy TrEMBL
Match: A0A5D3E7S6 (Transcription factor IIIB 90 kDa subunit-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00100 PE=4 SV=1)

HSP 1 Score: 348 bits (893), Expect = 3.20e-117
Identity = 192/237 (81.01%), Postives = 201/237 (84.81%), Query Frame = 0 

Query: 140 MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 199
           MK ADASLF MF +HKDKSSPS+DDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD
Sbjct: 1   MKPADASLFSMFSRHKDKSSPSNDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 60

Query: 200 YLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTG-TTREMQIKKRLSSKF 259
           YLQDQAAKKQGLN+VGA+AVVKKSKKR+RK EAPIN PAQADT  TT EM IKKRLSSKF
Sbjct: 61  YLQDQAAKKQGLNIVGAAAVVKKSKKRKRKIEAPINKPAQADTEETTHEMLIKKRLSSKF 120

Query: 260 NFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRN 319
           +FDVLDKL  DTPAPDSSEKQGASSCKENSSSGQ HC NELEDDFEDN            
Sbjct: 121 DFDVLDKLLYDTPAPDSSEKQGASSCKENSSSGQSHCINELEDDFEDN------------ 180

Query: 320 ELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
                    HTET+FEEN DIEG EDPTETYGNEYYDFQ+EEEYGYGY+DYGGEEEY
Sbjct: 181 ---------HTETVFEENLDIEG-EDPTETYGNEYYDFQNEEEYGYGYDDYGGEEEY 215

[Close]
BLAST of CsGy4G016940 vs. ExPASy TrEMBL
Match: A0A1S3B993 (uncharacterized protein LOC103487591 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487591 PE=4 SV=1)

HSP 1 Score: 348 bits (893), Expect = 3.20e-117
Identity = 192/237 (81.01%), Postives = 201/237 (84.81%), Query Frame = 0 

Query: 140 MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 199
           MK ADASLF MF +HKDKSSPS+DDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD
Sbjct: 1   MKPADASLFSMFSRHKDKSSPSNDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 60

Query: 200 YLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTG-TTREMQIKKRLSSKF 259
           YLQDQAAKKQGLN+VGA+AVVKKSKKR+RK EAPIN PAQADT  TT EM IKKRLSSKF
Sbjct: 61  YLQDQAAKKQGLNIVGAAAVVKKSKKRKRKIEAPINKPAQADTEETTHEMLIKKRLSSKF 120

Query: 260 NFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRN 319
           +FDVLDKL  DTPAPDSSEKQGASSCKENSSSGQ HC NELEDDFEDN            
Sbjct: 121 DFDVLDKLLYDTPAPDSSEKQGASSCKENSSSGQSHCINELEDDFEDN------------ 180

Query: 320 ELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
                    HTET+FEEN DIEG EDPTETYGNEYYDFQ+EEEYGYGY+DYGGEEEY
Sbjct: 181 ---------HTETVFEENLDIEG-EDPTETYGNEYYDFQNEEEYGYGYDDYGGEEEY 215

[Close]
BLAST of CsGy4G016940 vs. ExPASy TrEMBL
Match: A0A1S4DV37 (uncharacterized protein LOC103487591 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487591 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 2.20e-115
Identity = 192/238 (80.67%), Postives = 201/238 (84.45%), Query Frame = 0 

Query: 140 MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 199
           MK ADASLF MF +HKDKSSPS+DDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD
Sbjct: 1   MKPADASLFSMFSRHKDKSSPSNDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 60

Query: 200 YLQDQAAKKQGLNVVGASAVVKKSKK-RQRKTEAPINMPAQADTG-TTREMQIKKRLSSK 259
           YLQDQAAKKQGLN+VGA+AVVKKSKK R+RK EAPIN PAQADT  TT EM IKKRLSSK
Sbjct: 61  YLQDQAAKKQGLNIVGAAAVVKKSKKQRKRKIEAPINKPAQADTEETTHEMLIKKRLSSK 120

Query: 260 FNFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCR 319
           F+FDVLDKL  DTPAPDSSEKQGASSCKENSSSGQ HC NELEDDFEDN           
Sbjct: 121 FDFDVLDKLLYDTPAPDSSEKQGASSCKENSSSGQSHCINELEDDFEDN----------- 180

Query: 320 NELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
                     HTET+FEEN DIEG EDPTETYGNEYYDFQ+EEEYGYGY+DYGGEEEY
Sbjct: 181 ----------HTETVFEENLDIEG-EDPTETYGNEYYDFQNEEEYGYGYDDYGGEEEY 216

[Close]
BLAST of CsGy4G016940 vs. ExPASy TrEMBL
Match: A0A1S3B9Q2 (uncharacterized protein LOC103487591 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487591 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 1.92e-99
Identity = 171/236 (72.46%), Postives = 179/236 (75.85%), Query Frame = 0 

Query: 140 MKTADASLFGMFFKHKDKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 199
           MK ADASLF MF +HKDKSSPS+DDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD
Sbjct: 1   MKPADASLFSMFSRHKDKSSPSNDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKD 60

Query: 200 YLQDQAAKKQGLNVVGASAVVKKSKKRQRKTEAPINMPAQADTGTTREMQIKKRLSSKFN 259
           YLQDQAAKKQGLN+VGA+AVVKKS                           KKRLSSKF+
Sbjct: 61  YLQDQAAKKQGLNIVGAAAVVKKS---------------------------KKRLSSKFD 120

Query: 260 FDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSSGQIHCRNE 319
           FDVLDKL  DTPAPDSSEKQGASSCKENSSSGQ HC NELEDDFEDN             
Sbjct: 121 FDVLDKLLYDTPAPDSSEKQGASSCKENSSSGQSHCINELEDDFEDN------------- 180

Query: 320 LEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYGGEEEY 375
                   HTET+FEEN DIEG EDPTETYGNEYYDFQ+EEEYGYGY+DYGGEEEY
Sbjct: 181 --------HTETVFEENLDIEG-EDPTETYGNEYYDFQNEEEYGYGYDDYGGEEEY 187

[Close]
BLAST of CsGy4G016940 vs. TAIR 10
Match: AT3G09360.1 (Cyclin/Brf1-like TBP-binding protein )

HSP 1 Score: 82.4 bits (202), Expect = 8.4e-16
Identity = 77/239 (32.22%), Postives = 115/239 (48.12%), Query Frame = 0 

Query: 156 DKSSPSDDDSEDLGDVFDSEVNSYLNNRKEAHYKKIIWEQINKDYLQDQAAKKQGLNVVG 215
           ++ + + D+S++  D+ D EVN Y+NN +E HYK I W ++NKDYL++QAAK+  L    
Sbjct: 387 EEHADTSDESDNFSDISDDEVNGYINNEEETHYKTITWTEMNKDYLEEQAAKEAALKAAS 446

Query: 216 ----------------------ASAVVKKSKKRQRKTEAPINM--PAQADTGTTREMQIK 275
                                 A A   + +K+Q+K E   N   PA A     R +  K
Sbjct: 447 EALKASNSNCPEDARKAFEAAKADAAKSRKEKQQKKAEEAKNAAPPATAVEAVRRTLD-K 506

Query: 276 KRLSSKFNFDVLDKLFSDTPAPDSSEKQGASSCKENSSSGQIHCRNELEDDFEDNLNSSS 335
           KRLSS  N+DVL+ LF DT AP+ S K+  +               ++E   E+N    S
Sbjct: 507 KRLSSVINYDVLESLF-DTSAPEKSPKRSKT-------------ETDIEKKKEENKEMKS 566

Query: 336 GQIHCRNELEDNFEDNHTETMFEENFDIEGEEDPTETYGNEYYDFQDEEEYGYGYNDYG 371
            + H   E ED  E++      EE  ++E  +  T+    E +  +DEEE   G ND+G
Sbjct: 567 NE-HENGENEDEDEED------EEEGNVESYDMKTDFQNGEKFYEEDEEEEEDG-NDFG 602

[Close]
BLAST of CsGy4G016940 vs. TAIR 10
Match: AT1G51890.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-06
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0 

Query: 42  TSAPFTKDLRDLEGLSEGVVDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMS 97
           T+ P     R+   ++E V+  M++ GDI SI++PKL ED++ N +WKVVE+A++
Sbjct: 766 TNQPVMNKNRERPHINEWVMF-MLTNGDIKSIVDPKLNEDYDTNGVWKVVELALA 819

[Close]
BLAST of CsGy4G016940 vs. TAIR 10
Match: AT1G51890.2 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-06
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0 

Query: 42  TSAPFTKDLRDLEGLSEGVVDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMS 97
           T+ P     R+   ++E V+  M++ GDI SI++PKL ED++ N +WKVVE+A++
Sbjct: 718 TNQPVMNKNRERPHINEWVMF-MLTNGDIKSIVDPKLNEDYDTNGVWKVVELALA 771

[Close]
BLAST of CsGy4G016940 vs. TAIR 10
Match: AT1G51800.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 49.7 bits (117), Expect = 6.1e-06
Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 0 

Query: 42  TSAPFTKDLRDLEGLSEGVVDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMS 97
           T+ P     R+   ++E  V  M+S+GDI+SI++PKL+ DF+ N IWKVVE AM+
Sbjct: 782 TNQPVIDMKREKSHIAEW-VGLMLSRGDINSIVDPKLQGDFDPNTIWKVVETAMT 835

[Close]
BLAST of CsGy4G016940 vs. TAIR 10
Match: AT1G51880.1 (root hair specific 6 )

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05
Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 42  TSAPFTKDLRDLEGLSEGVVDPMVSQGDISSIINPKLKEDFEVNAIWKVVEIAMS 97
           T+ P T   R+   ++E  V  M+++GDI SI++PKL  D++ N  WK+VE+A++
Sbjct: 770 TNQPVTDKTRERTHINEW-VGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALA 823

The following BLAST results are available for this feature:
BLAST of CsGy4G016940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9P6R02.9e-0530.28Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 97... [more]
C0LGG65.0e-0541.82Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana OX=3... [more]
Q9C8I68.5e-0547.27LRR receptor-like serine/threonine-protein kinase IOS1 OS=Arabidopsis thaliana O... [more]
Q9FZB12.5e-0440.00Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidop... [more]
C0LGR64.2e-0427.27Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidop... [more]
BLAST of CsGy4G016940 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649624.14.20e-26899.73hypothetical protein Csa_012863 [Cucumis sativus][more]
XP_004142699.14.69e-160100.00uncharacterized protein LOC101217202 isoform X2 [Cucumis sativus][more]
XP_011653794.13.26e-15899.58uncharacterized protein LOC101217202 isoform X1 [Cucumis sativus][more]
XP_008444162.16.62e-11781.01PREDICTED: uncharacterized protein LOC103487591 isoform X2 [Cucumis melo] >TYK31... [more]
XP_016899849.14.54e-11580.67PREDICTED: uncharacterized protein LOC103487591 isoform X1 [Cucumis melo][more]
BLAST of CsGy4G016940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0J79.82e-19597.56BRF1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G363410 PE=4 S... [more]
A0A5D3E7S63.20e-11781.01Transcription factor IIIB 90 kDa subunit-like isoform X3 OS=Cucumis melo var. ma... [more]
A0A1S3B9933.20e-11781.01uncharacterized protein LOC103487591 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4DV372.20e-11580.67uncharacterized protein LOC103487591 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B9Q21.92e-9972.46uncharacterized protein LOC103487591 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of CsGy4G016940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G09360.18.4e-1632.22Cyclin/Brf1-like TBP-binding protein [more]
AT1G51890.13.5e-0641.82Leucine-rich repeat protein kinase family protein [more]
AT1G51890.23.5e-0641.82Leucine-rich repeat protein kinase family protein [more]
AT1G51800.16.1e-0647.27Leucine-rich repeat protein kinase family protein [more]
AT1G51880.11.8e-0540.00root hair specific 6 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011665Brf1, TBP-binding domainPFAMPF07741BRF1coord: 170..268
e-value: 2.9E-19
score: 69.2
NoneNo IPR availableGENE3D1.20.5.650Single helix bincoord: 149..210
e-value: 1.5E-16
score: 62.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR11618:SF53PLANT-SPECIFIC TFIIB-RELATED PROTEIN 2coord: 83..358
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 83..358

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G016940.2CsGy4G016940.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006383 transcription by RNA polymerase III
biological_process GO:0070897 transcription preinitiation complex assembly
biological_process GO:0006352 DNA-templated transcription, initiation
cellular_component GO:0016020 membrane
cellular_component GO:0000126 transcription factor TFIIIB complex
molecular_function GO:0000995 RNA polymerase III general transcription initiation factor activity