CsGy4G015945 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G015945
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 20704146 .. 20704560 (+)
RNA-Seq ExpressionCsGy4G015945
SyntenyCsGy4G015945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCCCGCACCGAAGTTCTTGGCTGGCACCATCTTCTTCTTCTTCTTCTTCTTCCCCATTTCCTTCGGGTTCTGGTCTCTTAGTTTTAGACCTTCCGCCATTGTTTCTCACTCATCTCTCTCCTTCTTCTCTCCATCTTCAGTTTCCTTTCACAAGGTAAGCTTCCTCTTTCCAAATCCTCCACACCCACCAAATTTGTTTTGACTTTGTGTTCTTCATTTTCCTGGATCTGATTCATCTTACACTCTTCATGAATATCCCTTCATTGGGTTGAAATTTGTTTGATCGCACTCATAAACCATATTAGATTTCTGGGTTGATGTTGTTGTTTTTTTTTTTTTTAATTCTTGTGTAGGAAATTCCTGGATTCCTTTTCAACTTTATCTGGGTGTTGATGTTGTTTCCGATCTAG

mRNA sequence

ATGCGGCCCGCACCGAAGTTCTTGGCTGGCACCATCTTCTTCTTCTTCTTCTTCTTCCCCATTTCCTTCGGGTTCTGGTCTCTTAGTTTTAGACCTTCCGCCATTGTTTCTCACTCATCTCTCTCCTTCTTCTCTCCATCTTCAGTTTCCTTTCACAAGGAAATTCCTGGATTCCTTTTCAACTTTATCTGGGTGTTGATGTTGTTTCCGATCTAG

Coding sequence (CDS)

ATGCGGCCCGCACCGAAGTTCTTGGCTGGCACCATCTTCTTCTTCTTCTTCTTCTTCCCCATTTCCTTCGGGTTCTGGTCTCTTAGTTTTAGACCTTCCGCCATTGTTTCTCACTCATCTCTCTCCTTCTTCTCTCCATCTTCAGTTTCCTTTCACAAGGAAATTCCTGGATTCCTTTTCAACTTTATCTGGGTGTTGATGTTGTTTCCGATCTAG

Protein sequence

MRPAPKFLAGTIFFFFFFFPISFGFWSLSFRPSAIVSHSSLSFFSPSSVSFHKEIPGFLFNFIWVLMLFPI*
Homology
[Close]
BLAST of CsGy4G015945 vs. NCBI nr
Match: KGN54457.1 (hypothetical protein Csa_012921 [Cucumis sativus])

HSP 1 Score: 142 bits (359), Expect = 1.02e-42
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MRPAPKFLAGTIFFFFFFFPISFGFWSLSFRPSAIVSHSSLSFFSPSSVSFHKEIPGFLF 60
          MRPAPKFLAGTIFFFFFFFPISFGFWSLSFRPSAIVSHSSLSFFSPSSVSFHKEIPGFLF
Sbjct: 1  MRPAPKFLAGTIFFFFFFFPISFGFWSLSFRPSAIVSHSSLSFFSPSSVSFHKEIPGFLF 60

Query: 61 NFIWVLMLFPI 71
          NFIWVLMLFPI
Sbjct: 61 NFIWVLMLFPI 71

[Close]
BLAST of CsGy4G015945 vs. ExPASy TrEMBL
Match: A0A0A0L1K0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334680 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 4.95e-43
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MRPAPKFLAGTIFFFFFFFPISFGFWSLSFRPSAIVSHSSLSFFSPSSVSFHKEIPGFLF 60
          MRPAPKFLAGTIFFFFFFFPISFGFWSLSFRPSAIVSHSSLSFFSPSSVSFHKEIPGFLF
Sbjct: 1  MRPAPKFLAGTIFFFFFFFPISFGFWSLSFRPSAIVSHSSLSFFSPSSVSFHKEIPGFLF 60

Query: 61 NFIWVLMLFPI 71
          NFIWVLMLFPI
Sbjct: 61 NFIWVLMLFPI 71

The following BLAST results are available for this feature:
BLAST of CsGy4G015945 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy4G015945 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54457.11.02e-42100.00hypothetical protein Csa_012921 [Cucumis sativus][more]
BLAST of CsGy4G015945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1K04.95e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334680 PE=4 SV=1[more]
BLAST of CsGy4G015945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G015945.1CsGy4G015945.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane