CsGy4G014130 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G014130
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr4: 19032466 .. 19033292 (+)
RNA-Seq Expression	CsGy4G014130
Synteny	CsGy4G014130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACTGTCCCTGTGGTTCAGCCTGCAACTGCAGTCCCAACAACTGCACGTAAGTCTCTTCTCTTCCTTTCTCCATAACGAAACAAAATGTCTATTTGTTTCTTTGGAATATGAGAATTTTTTTGGTTATTTTATACAATTCCTTTTTTCTTTTATTGTTTCTGATCAAATCAGGAAGTTGATTGATTTTTTTTCTTCTTTAATTGCAGATGCAACCATAATGTTGCTTCCATGAAAGAGTACGAACTTTCCCTCACATCTTTTCTTTTTGTTTATTATTTTCCATATATATTAATTCACTGTCTAAAATATAAAATATTAATTAATTATTTCATTATTCAAGAAGAAAAAAAGTAGTTATTCTAAATTATTCTAAAATCTTTATAATCATGAAATATATCTTTCATTTGTTTAGACAAAATGAAAATCACTAAAAACCTTGAAGAATTTCATGTTAGAGATGTATACGATCAAGTATATTAGTAATATATAATGCAAACCCTAACCTTTCAAAATTGAATATCAACTTAAATTTGTTATAATTATTTTTATTTATCAAAATCATCTAAATTAGACTATATTTCTCTAAGAAATTCTTCCTAAATACACACGAAATGAAAAACATGAATAGAGACTAAAACGACAATAAACCATTTGAATTCTCTAATTTTTATTAATCACTTTATTTAAAGGAAGTTGTATACAAATCCAGGATGTTAATAAATTTGAACTGTTTTTGACAAACAGAAACTTGGAAGGTAACTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAGCTGCAATCCATGCAACTGCTAA

mRNA sequence

ATGGCAAACTGTCCCTGTGGTTCAGCCTGCAACTGCAGTCCCAACAACTGCACATGCAACCATAATGTTGCTTCCATGAAAGAAAACTTGGAAGGTAACTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAGCTGCAATCCATGCAACTGCTAA

Coding sequence (CDS)

ATGGCAAACTGTCCCTGTGGTTCAGCCTGCAACTGCAGTCCCAACAACTGCACATGCAACCATAATGTTGCTTCCATGAAAGAAAACTTGGAAGGTAACTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAGCTGCAATCCATGCAACTGCTAA

Protein sequence

MANCPCGSACNCSPNNCTCNHNVASMKENLEGNCGCNKCSCGDNCSCNPCNC*

Homology

[Close]

BLAST of CsGy4G014130 vs. NCBI nr
Match: KAE8649531.1 (hypothetical protein Csa_017930, partial [Cucumis sativus])

HSP 1 Score: 119 bits (298), Expect = 1.80e-33
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 1  MANCPCGSACNCSPNNCTCNHNVASMKENLEGNCGCNKCSCGDNCSCNPCNC 52
          MANCPCGSACNCSPNNCTCNHNVASMKENLEGNCGCNKCSCGDNCSCNPCNC
Sbjct: 43 MANCPCGSACNCSPNNCTCNHNVASMKENLEGNCGCNKCSCGDNCSCNPCNC 94

[Close]

BLAST of CsGy4G014130 vs. NCBI nr
Match: XP_022966636.1 (uncharacterized protein LOC111466261 isoform X2 [Cucurbita maxima])

HSP 1 Score: 62.8 bits (151), Expect = 5.09e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 1   MANCPCGSACNCSPNNCTCNHNVAS-MKENLEGNCGCNKCSCGDNCSCNPCNC 52
           M  C CGSACNC  NNC+C H+ A  MK+NL G C      CG NCSC+PCNC
Sbjct: 53  MPKCGCGSACNCDLNNCSCKHDAAPIMKQNLSGGC-----KCGANCSCDPCNC 100

[Close]

BLAST of CsGy4G014130 vs. NCBI nr
Match: XP_022966635.1 (uncharacterized protein LOC111466261 isoform X1 [Cucurbita maxima])

HSP 1 Score: 58.2 bits (139), Expect = 3.43e-09
Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 1   MANCPCGSACNCSPNNCTCNHNVASMKE--NLEGNCGCNKCSCGDNCSCNPCNC 52
           M  C CGSACNC  NNC+C H+ A + +  NL G C      CG NCSC+PCNC
Sbjct: 53  MPKCGCGSACNCDLNNCSCKHDAAPIMKHRNLSGGC-----KCGANCSCDPCNC 101

[Close]

BLAST of CsGy4G014130 vs. NCBI nr
Match: KAG6541459.1 (hypothetical protein Mapa_017131 [Marchantia paleacea])

HSP 1 Score: 49.3 bits (116), Expect = 1.11e-05
Identity = 28/52 (53.85%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 4   CPCGSACNCSPNNCTCNHNVASMKENLE--GNCGCNK-CSCGDNCSCNPCNC 52
           C CG+ACNCS  N  C        E+ E  G  G N+ C CGDNCSCNPCNC
Sbjct: 53  CSCGAACNCSTGNSCCPKRSVDSFESSEMRGFEGANEGCKCGDNCSCNPCNC 104

[Close]

BLAST of CsGy4G014130 vs. NCBI nr
Match: KAG6557923.1 (hypothetical protein Mapa_000101 [Marchantia paleacea])

HSP 1 Score: 47.8 bits (112), Expect = 1.71e-05
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 4  CPCGSACNCSPNNCTCNHNVASMKENLE--GNCGCNK-CSCGDNCSCNPCNC 52
          C CG+AC CS  N  C++      E+ E  G  G N+ C CGDNCSCNPCNC
Sbjct: 9  CSCGTACKCSSGNSCCSNRSMDDFESSEMRGFEGANEGCKCGDNCSCNPCNC 60

[Close]

BLAST of CsGy4G014130 vs. ExPASy TrEMBL
Match: A0A6J1HPV6 (uncharacterized protein LOC111466261 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466261 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.46e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 1   MANCPCGSACNCSPNNCTCNHNVAS-MKENLEGNCGCNKCSCGDNCSCNPCNC 52
           M  C CGSACNC  NNC+C H+ A  MK+NL G C      CG NCSC+PCNC
Sbjct: 53  MPKCGCGSACNCDLNNCSCKHDAAPIMKQNLSGGC-----KCGANCSCDPCNC 100

[Close]

BLAST of CsGy4G014130 vs. ExPASy TrEMBL
Match: A0A6J1HS62 (uncharacterized protein LOC111466261 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466261 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.66e-09
Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 1   MANCPCGSACNCSPNNCTCNHNVASMKE--NLEGNCGCNKCSCGDNCSCNPCNC 52
           M  C CGSACNC  NNC+C H+ A + +  NL G C      CG NCSC+PCNC
Sbjct: 53  MPKCGCGSACNCDLNNCSCKHDAAPIMKHRNLSGGC-----KCGANCSCDPCNC 101

[Close]

BLAST of CsGy4G014130 vs. ExPASy TrEMBL
Match: A0A2R6WS85 (Uncharacterized protein OS=Marchantia polymorpha OX=3197 GN=MARPO_0062s0125 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.67e-05
Identity = 27/52 (51.92%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 4  CPCGSACNCSPNNCTCNHNVASMKENLE--GNCGCNK-CSCGDNCSCNPCNC 52
          C CG+ACNCS  N  C        +N E  G  G N+ C CGD CSCNPCNC
Sbjct: 9  CSCGAACNCSTGNSCCPMKSMDTFDNSEMRGFEGANEGCKCGDKCSCNPCNC 60

[Close]

BLAST of CsGy4G014130 vs. ExPASy TrEMBL
Match: A0A2R6WS10 (Uncharacterized protein OS=Marchantia polymorpha OX=3197 GN=MARPO_0062s0056 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.67e-05
Identity = 27/52 (51.92%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 4  CPCGSACNCSPNNCTCNHNVASMKENLE--GNCGCNK-CSCGDNCSCNPCNC 52
          C CG+ACNCS  N  C        +N E  G  G N+ C CGD CSCNPCNC
Sbjct: 9  CSCGAACNCSTGNSCCPMRSMDTFDNSEMRGFEGANEGCKCGDKCSCNPCNC 60

[Close]

BLAST of CsGy4G014130 vs. ExPASy TrEMBL
Match: A0A2R6WS87 (Uncharacterized protein OS=Marchantia polymorpha OX=3197 GN=MARPO_0062s0124 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.37e-05
Identity = 27/52 (51.92%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 4  CPCGSACNCSPNNCTCNHNVASMKENLE--GNCGCNK-CSCGDNCSCNPCNC 52
          C CG+ACNCS  N  C        +N E  G  G N+ C CGD CSCNPCNC
Sbjct: 9  CSCGAACNCSTGNRCCPMRSMDTFDNSEMRGFEGANEGCKCGDKCSCNPCNC 60

The following BLAST results are available for this feature:

BLAST of CsGy4G014130 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G014130 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649531.1	1.80e-33	100.00	hypothetical protein Csa_017930, partial [Cucumis sativus]	[more]
XP_022966636.1	5.09e-11	58.49	uncharacterized protein LOC111466261 isoform X2 [Cucurbita maxima]	[more]
XP_022966635.1	3.43e-09	53.70	uncharacterized protein LOC111466261 isoform X1 [Cucurbita maxima]	[more]
KAG6541459.1	1.11e-05	53.85	hypothetical protein Mapa_017131 [Marchantia paleacea]	[more]
KAG6557923.1	1.71e-05	51.92	hypothetical protein Mapa_000101 [Marchantia paleacea]	[more]

BLAST of CsGy4G014130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPV6	2.46e-11	58.49	uncharacterized protein LOC111466261 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HS62	1.66e-09	53.70	uncharacterized protein LOC111466261 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A2R6WS85	1.67e-05	51.92	Uncharacterized protein OS=Marchantia polymorpha OX=3197 GN=MARPO_0062s0125 PE=3...	[more]
A0A2R6WS10	1.67e-05	51.92	Uncharacterized protein OS=Marchantia polymorpha OX=3197 GN=MARPO_0062s0056 PE=3...	[more]
A0A2R6WS87	3.37e-05	51.92	Uncharacterized protein OS=Marchantia polymorpha OX=3197 GN=MARPO_0062s0124 PE=3...	[more]

BLAST of CsGy4G014130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G014130.2	CsGy4G014130.2	mRNA