Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCAGAATTCCAAGAAATCTCCCCCGGGCCCCTCCCTTTGCCTGATCATCAGATTTCCTTGATCCGCCTCGACCACATCGACTTCCTTTTCGATTCCTTCTCCTCCATCAGTACTCCACCTAATTCTCTCCCCTCCCCTTCCCGTTCCGTACAAGATCAACCACCTGTTTCCATCTCCGCCGTTGATGATGATGATGAACATAACGACGGTTTCACAACCCCCATCTCTTCACATCATAAGATTCCTGTCATTCCACACTGTCCCCCGGCTCCTTCAAGACCCAAACCCATCTCCTTGTCCAGAACCTTGTCCCCGCGAGCCTCCGGCGTTCGTAGAGGTTTTCTAGTGTATATCTCCGACCAGATCGTTGATTCCATCTTTTCCGATGATTTGCTGCATCAGAAGAGTAAGAAGAAAGCTCGCAAAGACGACGATAATGGCGGTGAATGAAATTTAACTATCTTCTTCTTCTTCTTTTTTATCTTTTTCTTTTTCGATCTCATGACTTGAAGATCCAAAACGAAATCCTAAATCGTAA
mRNA sequence
ATGGCCTCAGAATTCCAAGAAATCTCCCCCGGGCCCCTCCCTTTGCCTGATCATCAGATTTCCTTGATCCGCCTCGACCACATCGACTTCCTTTTCGATTCCTTCTCCTCCATCAGTACTCCACCTAATTCTCTCCCCTCCCCTTCCCGTTCCGTACAAGATCAACCACCTGTTTCCATCTCCGCCGTTGATGATGATGATGAACATAACGACGGTTTCACAACCCCCATCTCTTCACATCATAAGATTCCTGTCATTCCACACTGTCCCCCGGCTCCTTCAAGACCCAAACCCATCTCCTTGTCCAGAACCTTGTCCCCGCGAGCCTCCGGCGTTCGTAGAGGTTTTCTAGTGTATATCTCCGACCAGATCGTTGATTCCATCTTTTCCGATGATTTGCTGCATCAGAAGAGTAAGAAGAAAGCTCGCAAAGACGACGATAATGGCGATCCAAAACGAAATCCTAAATCGTAA
Coding sequence (CDS)
ATGGCCTCAGAATTCCAAGAAATCTCCCCCGGGCCCCTCCCTTTGCCTGATCATCAGATTTCCTTGATCCGCCTCGACCACATCGACTTCCTTTTCGATTCCTTCTCCTCCATCAGTACTCCACCTAATTCTCTCCCCTCCCCTTCCCGTTCCGTACAAGATCAACCACCTGTTTCCATCTCCGCCGTTGATGATGATGATGAACATAACGACGGTTTCACAACCCCCATCTCTTCACATCATAAGATTCCTGTCATTCCACACTGTCCCCCGGCTCCTTCAAGACCCAAACCCATCTCCTTGTCCAGAACCTTGTCCCCGCGAGCCTCCGGCGTTCGTAGAGGTTTTCTAGTGTATATCTCCGACCAGATCGTTGATTCCATCTTTTCCGATGATTTGCTGCATCAGAAGAGTAAGAAGAAAGCTCGCAAAGACGACGATAATGGCGATCCAAAACGAAATCCTAAATCGTAA
Protein sequence
MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVSISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVYISDQIVDSIFSDDLLHQKSKKKARKDDDNGDPKRNPKS*
Homology
BLAST of CsGy4G014077 vs. NCBI nr
Match:
KAE8649529.1 (hypothetical protein Csa_017979 [Cucumis sativus])
HSP 1 Score: 311 bits (797), Expect = 8.61e-107
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query: 1 MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVSI 60
MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVSI
Sbjct: 1 MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVSI 60
Query: 61 SAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVYI 120
SAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVYI
Sbjct: 61 SAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVYI 120
Query: 121 SDQIVDSIFSDDLLHQKSKKKARKDDDNGDPKRNPKS 157
SDQIVDSIFSDDLLHQKSKKKARKDDDNGDPKRNPKS
Sbjct: 121 SDQIVDSIFSDDLLHQKSKKKARKDDDNGDPKRNPKS 157
BLAST of CsGy4G014077 vs. NCBI nr
Match:
KAA0032644.1 (cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa] >TYK23525.1 cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa])
HSP 1 Score: 255 bits (651), Expect = 1.28e-84
Identity = 134/150 (89.33%), Postives = 138/150 (92.00%), Query Frame = 0
Query: 1 MASEFQEISPGP-LPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVS 60
M SEFQEISP P LPLPDHQISLIRLDHIDFLFDSFSS T P SLPSPS S+QDQPPVS
Sbjct: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS 60
Query: 61 ISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVY 120
ISAVDDD+EH+DGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLS RAS VRRGFLVY
Sbjct: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY 120
Query: 121 ISDQIVDSIFSDDLLHQKSKKKARKDDDNG 149
ISD+IVDSIFSDDLLH KSKK ARKDDDNG
Sbjct: 121 ISDEIVDSIFSDDLLHHKSKK-ARKDDDNG 149
BLAST of CsGy4G014077 vs. NCBI nr
Match:
XP_038877666.1 (cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida])
HSP 1 Score: 158 bits (399), Expect = 2.04e-46
Identity = 100/155 (64.52%), Postives = 108/155 (69.68%), Query Frame = 0
Query: 1 MASEFQEISPGPLPLPDHQISL--------IRLDHIDFLFDSFSSISTPPNSLPSPSRSV 60
MASEFQEIS L LPD QIS RL+ IDF+F S++ P+ L
Sbjct: 1 MASEFQEIS---LTLPD-QISFSAITPQPTFRLNQIDFIF----SLNNEPDRL------- 60
Query: 61 QDQPPVSISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGV 120
P SISAVDDDD DGF TP+SS HKIPV+ HCPPAP RPKPISLSRT S RASGV
Sbjct: 61 --APAESISAVDDDD---DGFRTPVSSDHKIPVVRHCPPAPKRPKPISLSRTSSMRASGV 120
Query: 121 RRGFLVYISDQIVDSIFSDDLLHQKSKKKARKDDD 147
RRGF VYISD+IVDSIF DLLHQKSKKKARKDDD
Sbjct: 121 RRGFRVYISDEIVDSIFCSDLLHQKSKKKARKDDD 135
BLAST of CsGy4G014077 vs. NCBI nr
Match:
XP_023518540.1 (uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 123 bits (309), Expect = 5.96e-32
Identity = 84/155 (54.19%), Postives = 99/155 (63.87%), Query Frame = 0
Query: 1 MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVS- 60
MAS+F+EIS P ++ L D I+F+F ++ P +L S R P S
Sbjct: 62 MASQFREISLTP---ESFRVKLEDADQIEFIF----AVENRPLALESQQRCDSSAPEESL 121
Query: 61 -ISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLV 120
ISAVDD+D GF TP SS +KIP++ HCPPAP RPKPISLSRT SPR SGVRRGF V
Sbjct: 122 LISAVDDED----GFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRT-SPRVSGVRRGFRV 181
Query: 121 YISDQIVDSIFSD----DLLHQKSKKKARKDDDNG 149
YISD+IVDSIFS D L K+KK ARKDD G
Sbjct: 182 YISDEIVDSIFSSSFGSDFLQHKNKK-ARKDDHGG 203
BLAST of CsGy4G014077 vs. NCBI nr
Match:
KAG6603657.1 (Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033839.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 119 bits (297), Expect = 7.90e-31
Identity = 87/161 (54.04%), Postives = 101/161 (62.73%), Query Frame = 0
Query: 1 MASEFQEISPGPLP------LPDHQISLIRLD----HIDFLFDSFSSISTPPNSLPSPSR 60
MAS FQEISP P + Q + L+ IDF+F + PP + S S
Sbjct: 1 MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIF---ALNDDPPLASDSVSV 60
Query: 61 SV-QDQPPVSISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRA 120
S+ + PP SIS DDDD GF TP SS HKIPV+ CPPAP RPKPIS SRTL PR
Sbjct: 61 SLDRSAPPDSIS--DDDD----GFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTL-PRT 120
Query: 121 SGVRRGFLVYISDQIVDSIFSDDLLHQKSKKKARKDDDNGD 150
SGVRRGF VYISD+I DSIF DLLHQK+KK ARK+ + G+
Sbjct: 121 SGVRRGFRVYISDEIADSIFCPDLLHQKTKK-ARKNGNGGE 150
BLAST of CsGy4G014077 vs. ExPASy TrEMBL
Match:
A0A0A0KZJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295530 PE=4 SV=1)
HSP 1 Score: 296 bits (758), Expect = 3.01e-101
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query: 1 MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVSI 60
MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVSI
Sbjct: 1 MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVSI 60
Query: 61 SAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVYI 120
SAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVYI
Sbjct: 61 SAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVYI 120
Query: 121 SDQIVDSIFSDDLLHQKSKKKARKDDDNG 149
SDQIVDSIFSDDLLHQKSKKKARKDDDNG
Sbjct: 121 SDQIVDSIFSDDLLHQKSKKKARKDDDNG 149
BLAST of CsGy4G014077 vs. ExPASy TrEMBL
Match:
A0A5A7SN91 (Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00290 PE=4 SV=1)
HSP 1 Score: 255 bits (651), Expect = 6.18e-85
Identity = 134/150 (89.33%), Postives = 138/150 (92.00%), Query Frame = 0
Query: 1 MASEFQEISPGP-LPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVS 60
M SEFQEISP P LPLPDHQISLIRLDHIDFLFDSFSS T P SLPSPS S+QDQPPVS
Sbjct: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS 60
Query: 61 ISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVY 120
ISAVDDD+EH+DGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLS RAS VRRGFLVY
Sbjct: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY 120
Query: 121 ISDQIVDSIFSDDLLHQKSKKKARKDDDNG 149
ISD+IVDSIFSDDLLH KSKK ARKDDDNG
Sbjct: 121 ISDEIVDSIFSDDLLHHKSKK-ARKDDDNG 149
BLAST of CsGy4G014077 vs. ExPASy TrEMBL
Match:
A0A6J1GEW0 (uncharacterized protein LOC111453550 OS=Cucurbita moschata OX=3662 GN=LOC111453550 PE=4 SV=1)
HSP 1 Score: 119 bits (297), Expect = 2.19e-30
Identity = 87/161 (54.04%), Postives = 101/161 (62.73%), Query Frame = 0
Query: 1 MASEFQEISPGPLP------LPDHQISLIRLD----HIDFLFDSFSSISTPPNSLPSPSR 60
MAS FQEISP P + Q + L+ IDF+F + PP + S S
Sbjct: 65 MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIF---ALNDDPPLASDSVSV 124
Query: 61 SV-QDQPPVSISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRA 120
S+ + PP SIS DDDD GF TP SS HKIPV+ CPPAP RPKPIS SRTL PR
Sbjct: 125 SLDRSAPPDSIS--DDDD----GFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTL-PRT 184
Query: 121 SGVRRGFLVYISDQIVDSIFSDDLLHQKSKKKARKDDDNGD 150
SGVRRGF VYISD+I DSIF DLLHQK+KK ARK+ + G+
Sbjct: 185 SGVRRGFRVYISDEIADSIFCPDLLHQKTKK-ARKNGNGGE 214
BLAST of CsGy4G014077 vs. ExPASy TrEMBL
Match:
A0A6J1CQ22 (cyclin-dependent protein kinase inhibitor SMR2-like OS=Momordica charantia OX=3673 GN=LOC111013692 PE=4 SV=1)
HSP 1 Score: 108 bits (270), Expect = 3.53e-27
Identity = 79/148 (53.38%), Postives = 88/148 (59.46%), Query Frame = 0
Query: 1 MASEFQEISPGPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVSI 60
MAS FQEIS P P QISL + FL + + + + Q + SI
Sbjct: 1 MASHFQEISLSPSP----QISLPSISPESFLLNLEDANNQIDFLFALNTNQQQARRDDSI 60
Query: 61 SAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISL-SRTLSPR-ASGVRRGFLV 120
SA DD GF TP SS HKIPVI CPPAP RPKPIS SR SPR ASGVRRGF V
Sbjct: 61 SADDD------GFRTPTSSDHKIPVIKQCPPAPRRPKPISCRSRRSSPRLASGVRRGFRV 120
Query: 121 YISDQIVDSIFSDDLLHQKSKKKARKDD 146
YISD+IV+SIFS HQK KK AR+DD
Sbjct: 121 YISDEIVESIFSSSFAHQKMKK-ARRDD 137
BLAST of CsGy4G014077 vs. ExPASy TrEMBL
Match:
A0A5D3AH22 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G241600v1 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 1.83e-11
Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 0
Query: 60 ISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTL--SPRASGVRRGFL 119
+ A DD D+ +DGF TP S HKIPV+ CPPAP +PKP+S + SP +SG R L
Sbjct: 99 LKANDDGDDDDDGFKTPTSLDHKIPVMKQCPPAPRKPKPLSSKKRKPSSPPSSGGDRNLL 158
Query: 120 VYISDQIVDSIFSDDLL---HQKSKKKARKDDDN 148
+ V+S+F D+L H+K KK ARK+D N
Sbjct: 159 KIDFAKEVESLFPSDVLADIHRKVKK-ARKEDYN 191
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAE8649529.1 | 8.61e-107 | 100.00 | hypothetical protein Csa_017979 [Cucumis sativus] | [more] |
KAA0032644.1 | 1.28e-84 | 89.33 | cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa] >... | [more] |
XP_038877666.1 | 2.04e-46 | 64.52 | cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida] | [more] |
XP_023518540.1 | 5.96e-32 | 54.19 | uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo] | [more] |
KAG6603657.1 | 7.90e-31 | 54.04 | Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma ... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KZJ9 | 3.01e-101 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295530 PE=4 SV=1 | [more] |
A0A5A7SN91 | 6.18e-85 | 89.33 | Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa ... | [more] |
A0A6J1GEW0 | 2.19e-30 | 54.04 | uncharacterized protein LOC111453550 OS=Cucurbita moschata OX=3662 GN=LOC1114535... | [more] |
A0A6J1CQ22 | 3.53e-27 | 53.38 | cyclin-dependent protein kinase inhibitor SMR2-like OS=Momordica charantia OX=36... | [more] |
A0A5D3AH22 | 1.83e-11 | 46.81 | Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G241600v1 P... | [more] |
Match Name | E-value | Identity | Description | |