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CsGy4G012520 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACATACTTGAATTTAATTAATTTTGTTGATGAAAAGACTAAACATGGCAAAACCAATGTTAGGAAATTATATGAAGGTTTGAGTCTAACACTACTGATGGATGATGGAATTGGGATGCAAAATCTGAACTATAGTGTTGAGAAATGAAAATCATGACCAGCAATTTGGTCTGATCACATACTTTGAACACTATCGTCATCATGTACAGCGATTACCGACTAAGTTTATAATCAACTAATGGTCAGTGTTGGATTCAAAAATCTGAAATCTAATGGTGGGAAATCGAGACCACCGCCCGCCACTGCCTCCCTTAGGTGGGGGAAGATCGTCTTCTTCAATCTCCTTAGCTGCTCCAACTTCATGGGCGTCCACGACCTCGGTCTCTGCTTCAGGCAAGAGAATTCAGAGGGAAATGACTGAGTTTAACTTAGACCCACCTTCCGATTGCTCCGCTGGCCCTAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTTCAGGTAGTTGCGACTTTTCACTCTACTCTTTGGGCTTTATCGCTTCTTATTCGTACGGTTTTTGGCTTTTGTTCTTCTTTTTCTCCCTCCCTTTGCTCCATGATTTCTTGCTTTTCAGCTCGATGATTTCTCATGACCGTTAGGATTACACTTTCCTTCAGTGAGCTATTGCACTCTTTCTTTGCTATTATTTTTTTTTTATTTTTATTTTTTTTTATAGTTTTTGGGCTGGATAATTTAACCATCTAAAGCTATGTTGCTTATCTCATTTGTTTACGATTCCTGAACAGATGCTCACTGAAACTCTAATGGGGTTTTATTACCTGATTCAAAACATATTCTTTGAACAAGCAAATGTTTAACACAAGTTTAAAGAAAGTGATTAGGGAAGAAGATGTTCACTGTTGGGAGGAGTCAGGAGTGCATATACTGCTCCTTCAAGTACTTGGTGTGCTATGCTCCTCTGTCTCAGTGTATTTTGTGCAAATAATAAACGATTAGATTAGTTGCCAAGGAATTAAGACATAAGTTTTCACGCTGAATTGATGGCGTTACATTTAGACTAAAGTTGTTATCAAAAACAAATCTTTTATTAAAGTTGTTAGAGCAACAAGCTGAAATATCATCCAAAAATACACAAGGTTCTGCTATGGTTTTCCTACGTTGTTACACGGTCAATTCTCGTCTATATACTCAATATCACCCAAAAATATACAAAATGATTGGAGAAGATGCTCTCTGATACCAAAACTCTCAAGGATTTGGAAGAACGTTCTCTTGCTAAATAGCCACACGTCACTGTTGTACACACATATGCTTAAATGAATGAGATGAGTGCATGAAATCTGAGCCAGGATTTCAACTAAACACGATGAATACACAAGGAGAGTCATGTGTTGCTATAGGTCACTATTAAACTACCTTTCTCCTTTGCATCAAGTGAATTGTTTTATTAAAACAGTGTATTTTATTGGCTTCCTCATTGAGTCTTACTGAACGAATGGGTAGACAAGAGAGAGATTAACCTAGCTCATGCAATTCGTTTCTAGTATTAGTTTATTAGACAAGAAAAAAATGCACTGAAGGGCAAAAGAGGCATAGGCGATGTTTAATGGTATGGAAGGCGGACAATAGAGAGAAAAGCTGTGCTTATGCTGCTTATACCTGATATTAGTGTTTTAGACAACAACAATACAAGAAAGCACCAATGGTGTATAAGTTATGTTTATCTACCATATTGTTTAATGAAGTAAACTTCAGAAACCTTGTCCCAGCGAATCACTTCATTTTCTTCTCTTTTCGTCCCAGGTTTTCTCTCTCTTGCGTACTAGACATGCACTACAAACCATTTGTCTATAAAGTTGTATTTATTATTGATTATATGAGGGCTTTGTTTGAATACTATCTTGAATATATGAGGAAAAATTACTGATAAAATTTATCTAGCTTTTCTCAACAGTAGTAATCTTAACAAATATCTCTGTCTTATTTTAGGAACGCCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTTAATCCTCCAAAGGTACTCTTGCTCACATCCTTAAATTTTAGGATACAAAAACCAAATTTTCTTTTACCTTCATCATGAGAATCAAATGGTCATTCTTGACCTGACACTGTACTGTTTTGAGTTTTATACTCATGTTTATTTACCAAGAAGGATTTGGTCTGCAGGTTGTATTTAAAACCCGAATCTACCACTGTAATGTTGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACAATCGCAAAGGTGTTAATTGCAGTGAAATCAATTTTCGCAAATCCCAACCCTTGTGAGTCGCCTCATTTTTTTGGACTCATTGTTTATGTCACTGTATACTGTAGTTTATAGTTCGTATGCTTTTCTATTTCTAGGGCTTCTCTAAAGCTAAACCTGCTCTCTTTTTATTTGGTAATTGTGAACTGAGACATAGGTGAACTGAAATATCGCACTGCATTGAGTTCTTTAAAATCAGTTACAAATTACAATTACAACATCTAAAGAGGCAGAGGGGAGTAGATACCTTTTATCAATATTAAGCACTAGGAGTGTAAGAATGAAAGGATGCAGATATATGCTTGGTTAGGTTGGGCTTTCAAAGGGAGCGATTTGGTGATTACTGGAAGGAATTTACTAGGAATAGAAACTAAATTGGTTGGGGGAACCAATGGAGGATTTGTAGAGAAATTGAATTAGTGTATATACAATTCTCCATGAATATATATGCTTGGCTATAGATAGTTACTGTATTTACTAGTAAAAAGAATTCTAGTTACAACGATTGCTGGTGGGATGACTATCTTGTGAAAAGGAATAGGCAGGGCTTTGTTATTGGTACCTAACCTGAATCCTGATCAAGGAGATGGTTGGTCCGTTTTCCATGAAAATATAGTGGGAATGAAGAGAAGGCATACATACAATGTCAATGTGCTATCTTTTCTACACAACTAATTGATCTAGTTGATGTTAACTTTGAAATCTCACATTCATTTTGGATTTTACTAATTTTGCAGATGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTCGCCAAATGAATGGAATCTCAAACCACTAATATACAATTGCATACTACTTTTTTGGTTATCATTTTCTGAAATTGCTTCCAATTCTCCCCCTTCACTTGGTAATTTACGTCTGTTTTCACAAGAAGTGACCAAGAACACCGGAAAGCAAATTTTGAGACGAGGACATGGAATAGAGTACAACCTGAAAGTTCTTGGATGCAGGAGTGGATAGTATAGATGATTTGTAGATTATTCTATATGTATCAATGTTCTTTTGGAGTGTTCAAGCCTTCAAGGTGCACTAGAACATATAGCCCTTCGGAATTTAGGTATCAATCAAAGGAAAAACGATTGTTATATGTATACATATATATATTATATATATATGATGCATATTTAATAGTCTTTTGGAGATTATTCTGATGATTCAGACAGATTTTAGCTGTACACATACACAAATAAATTTTGAACAGGAGTGTATACACACAAATCATTAACATATTCTTTGAAACCAAGCATGTGTATATATTTTACAAGTATGATATTTCAAGCATGTCGATAGTATACTCGACGTGAGACATCAAGTATATTACACGACTTTTAGATAAAGACG GACATACTTGAATTTAATTAATTTTGTTGATGAAAAGACTAAACATGGCAAAACCAATGTTAGGAAATTATATGAAGGTTTGAGTCTAACACTACTGATGGATGATGGAATTGGGATGCAAAATCTGAACTATAGTGTTGAGAAATGAAAATCATGACCAGCAATTTGGTCTGATCACATACTTTGAACACTATCGTCATCATGTACAGCGATTACCGACTAAGTTTATAATCAACTAATGGTCAGTGTTGGATTCAAAAATCTGAAATCTAATGGTGGGAAATCGAGACCACCGCCCGCCACTGCCTCCCTTAGGTGGGGGAAGATCGTCTTCTTCAATCTCCTTAGCTGCTCCAACTTCATGGGCGTCCACGACCTCGGTCTCTGCTTCAGGCAAGAGAATTCAGAGGGAAATGACTGAGTTTAACTTAGACCCACCTTCCGATTGCTCCGCTGGCCCTAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTTCAGGAACGCCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTTAATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGTAATGTTGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACAATCGCAAAGGTGTTAATTGCAGTGAAATCAATTTTCGCAAATCCCAACCCTTATGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTCGCCAAATGAATGGAATCTCAAACCACTAATATACAATTGCATACTACTTTTTTGGTTATCATTTTCTGAAATTGCTTCCAATTCTCCCCCTTCACTTGGTAATTTACGTCTGTTTTCACAAGAAGTGACCAAGAACACCGGAAAGCAAATTTTGAGACGAGGACATGGAATAGAGTACAACCTGAAAGTTCTTGGATGCAGGAGTGGATAGTATAGATGATTTGTAGATTATTCTATATGTATCAATGTTCTTTTGGAGTGTTCAAGCCTTCAAGGTGCACTAGAACATATAGCCCTTCGGAATTTAGGTATCAATCAAAGGAAAAACGATTGTTATATGTATACATATATATATTATATATATATGATGCATATTTAATAGTCTTTTGGAGATTATTCTGATGATTCAGACAGATTTTAGCTGTACACATACACAAATAAATTTTGAACAGGAGTGTATACACACAAATCATTAACATATTCTTTGAAACCAAGCATGTGTATATATTTTACAAGTATGATATTTCAAGCATGTCGATAGTATACTCGACGTGAGACATCAAGTATATTACACGACTTTTAGATAAAGACG ATGGTGGGAAATCGAGACCACCGCCCGCCACTGCCTCCCTTAGGTGGGGGAAGATCGTCTTCTTCAATCTCCTTAGCTGCTCCAACTTCATGGGCGTCCACGACCTCGGTCTCTGCTTCAGGCAAGAGAATTCAGAGGGAAATGACTGAGTTTAACTTAGACCCACCTTCCGATTGCTCCGCTGGCCCTAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTTCAGGAACGCCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTTAATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGTAATGTTGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACAATCGCAAAGGTGTTAATTGCAGTGAAATCAATTTTCGCAAATCCCAACCCTTATGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTCGCCAAATGA MVGNRDHRPPLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK* Homology
BLAST of CsGy4G012520 vs. ExPASy Swiss-Prot
Match: Q9LJD7 (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana OX=3702 GN=COP10 PE=1 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 1.7e-70 Identity = 120/157 (76.43%), Postives = 135/157 (85.99%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy Swiss-Prot
Match: Q2T9X7 (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus OX=9913 GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 4.2e-53 Identity = 101/182 (55.49%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy Swiss-Prot
Match: Q969T4 (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens OX=9606 GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 4.2e-53 Identity = 101/182 (55.49%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy Swiss-Prot
Match: P52483 (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus OX=10090 GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 209.1 bits (531), Expect = 4.2e-53 Identity = 101/182 (55.49%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy Swiss-Prot
Match: Q96LR5 (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens OX=9606 GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.0e-51 Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 0
BLAST of CsGy4G012520 vs. NCBI nr
Match: XP_004142171.1 (constitutive photomorphogenesis protein 10 [Cucumis sativus] >KGN54065.1 hypothetical protein Csa_018040 [Cucumis sativus]) HSP 1 Score: 388 bits (996), Expect = 3.24e-136 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsGy4G012520 vs. NCBI nr
Match: XP_008449820.1 (PREDICTED: constitutive photomorphogenesis protein 10 [Cucumis melo] >KAA0040070.1 constitutive photomorphogenesis protein 10 [Cucumis melo var. makuwa] >TYK21694.1 constitutive photomorphogenesis protein 10 [Cucumis melo var. makuwa]) HSP 1 Score: 380 bits (976), Expect = 3.63e-133 Identity = 182/185 (98.38%), Postives = 182/185 (98.38%), Query Frame = 0
BLAST of CsGy4G012520 vs. NCBI nr
Match: XP_038902201.1 (constitutive photomorphogenesis protein 10 isoform X2 [Benincasa hispida]) HSP 1 Score: 370 bits (950), Expect = 3.35e-129 Identity = 177/185 (95.68%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CsGy4G012520 vs. NCBI nr
Match: XP_038902200.1 (constitutive photomorphogenesis protein 10 isoform X1 [Benincasa hispida]) HSP 1 Score: 368 bits (945), Expect = 5.43e-128 Identity = 176/184 (95.65%), Postives = 176/184 (95.65%), Query Frame = 0
BLAST of CsGy4G012520 vs. NCBI nr
Match: XP_022943567.1 (constitutive photomorphogenesis protein 10 [Cucurbita moschata] >XP_022986179.1 constitutive photomorphogenesis protein 10 [Cucurbita maxima] >XP_023512726.1 constitutive photomorphogenesis protein 10 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7010225.1 Constitutive photomorphogenesis protein 10 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 366 bits (940), Expect = 1.66e-127 Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy TrEMBL
Match: A0A0A0KWU2 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280420 PE=4 SV=1) HSP 1 Score: 388 bits (996), Expect = 1.57e-136 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy TrEMBL
Match: A0A5D3DDP3 (Constitutive photomorphogenesis protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00610 PE=4 SV=1) HSP 1 Score: 380 bits (976), Expect = 1.76e-133 Identity = 182/185 (98.38%), Postives = 182/185 (98.38%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy TrEMBL
Match: A0A1S3BMW7 (constitutive photomorphogenesis protein 10 OS=Cucumis melo OX=3656 GN=LOC103491591 PE=4 SV=1) HSP 1 Score: 380 bits (976), Expect = 1.76e-133 Identity = 182/185 (98.38%), Postives = 182/185 (98.38%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy TrEMBL
Match: A0A6J1JFC7 (constitutive photomorphogenesis protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111483999 PE=4 SV=1) HSP 1 Score: 366 bits (940), Expect = 8.04e-128 Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CsGy4G012520 vs. ExPASy TrEMBL
Match: A0A6J1FTD1 (constitutive photomorphogenesis protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111448300 PE=4 SV=1) HSP 1 Score: 366 bits (940), Expect = 8.04e-128 Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CsGy4G012520 vs. TAIR 10
Match: AT3G13550.1 (Ubiquitin-conjugating enzyme family protein ) HSP 1 Score: 266.9 bits (681), Expect = 1.2e-71 Identity = 120/157 (76.43%), Postives = 135/157 (85.99%), Query Frame = 0
BLAST of CsGy4G012520 vs. TAIR 10
Match: AT3G13550.2 (Ubiquitin-conjugating enzyme family protein ) HSP 1 Score: 218.8 bits (556), Expect = 3.7e-57 Identity = 98/125 (78.40%), Postives = 111/125 (88.80%), Query Frame = 0
BLAST of CsGy4G012520 vs. TAIR 10
Match: AT2G16740.1 (ubiquitin-conjugating enzyme 29 ) HSP 1 Score: 188.3 bits (477), Expect = 5.4e-48 Identity = 76/143 (53.15%), Postives = 109/143 (76.22%), Query Frame = 0
BLAST of CsGy4G012520 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 ) HSP 1 Score: 185.3 bits (469), Expect = 4.6e-47 Identity = 76/145 (52.41%), Postives = 108/145 (74.48%), Query Frame = 0
BLAST of CsGy4G012520 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 ) HSP 1 Score: 185.3 bits (469), Expect = 4.6e-47 Identity = 76/145 (52.41%), Postives = 108/145 (74.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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