CsGy4G011760 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G011760
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	NusB domain-containing protein
Location	Gy14Chr4: 11760484 .. 11773213 (-)
RNA-Seq Expression	CsGy4G011760
Synteny	CsGy4G011760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGAGACGGCTTACGCACCACCAAACAAGTCGGAGGAGCTTCCTTCTTCTTCCACTAGGAAATGGCTCTGCCTCCAAGTCCTCTGTGAGTAACGAGAGCTGATTTTGGGGCATTTCACAATGTCTTTAGCTCCACCCACCTCCCTTTATCCCTATTCTTCCCACTCTCATCCCCTCCCCAAATCCCATTTATCTTCCTTTACTCAACGTTCCCATCCCAACTTCTTTTCCTTATGCTTTCCCTTTCATCTTAGTTTCTCCACCTCCTTTTCAACCCTTCACTCCCTTAAATACTCAGCTTTCAAAACCGACACTGGACTCGGAGATTCCCATGATGCTGACCAACCTCATAGTTTGAAATTTGCACCTGGAGCTTCTGCCCACAAGACTCGACTCTTCACCGTTGGGGATAAAGTTATCACTACCAGGTTTCTTTTTCCTTTGCCCTTCCACTTCTTCTGTTCTCTATTCTTTACCTACTCCCCTCTTTCCTTTTTCCATTTAAACTCTGCTTTCTAAATCTTGCTCACCATGTAAGGGGAGTTAAGGAATTAGTGGTAAATCTTGGGTAAATTCATGCTAATCATTTTTTAGTTTCTTATTTGAATTTGAATTCCTTTTTAGTTTCATTTTGGGATTTCATTTTCCATATTCTGGAGTCCTCTCTCGTGTACCTTTACAACTTCGATTCATATTAAGTTTTGAAAGTTGATAATTGTATAATTTTCTCCTTTGGGTCCTTTAGGCTACATCAGTTCACCAACAACAATTGACCTCTCTGTTAATTTCTCACGCTTAGCAATTTGAATTGTGAAATAGAGGCGGTAGGATGTGGCATGCTTCATCACTTCATACTAGTTACTCCTTCTAAATACTTGCATCATCTTTACAACTTTCCAGAATGGTGGATGCAGGGTCAGTGAACATTTGCTTTAAATATCAGTTTTGGATATTTCCTTAGTAGTCTAAAATTGGACTATACCAGATGTGGCACCTGGATGAGCACCGAGATAACACGACCACCATCTTATACTGGTCAACAGTAACGAACTTGGTTTTATGTAATTCAACCTATGGTTACTATGTAGAAAAACACTACTGAAACTAAAACCTTGTTCTTCCTGATACTCTTTCACTTGCGAGCTTCGAGTTGCTCCTGAACTCAACAAGCTTAAGAGGTTAAGGGCTGATTGGGGAGAGGAGTTGGGTGGGGTGGAGTTGTTTGGCCGCAGGAGTTATTAAACACATTGTAGATCACCCGATTCATTAGCATCAATTTCATGATTTATTAACTCCTTACATTGTGGGTCCATAACTAAACAACTTTATTTTTCATTCTCTCGTGGGTTATGGCAAATTTAGTGAGTAATTTATATTATTGACACTCTAGACAATTGGATATTAATTGAGACAACTGCTAGAGGCAAGGAAATTGTCATATTGTTGTTTTGCCTAGTTTTTCTTAAAGAAAGGAAAAAGGGAAAAGAAAAAGAAAAGATATAGGCTCCATGATTACTACATCTTTCCAGAAAACATGACTTAACTTAGCATGCTTAGTTTTCATTCTTGCTCATCCTCTCTTTTCTTCAGGCCTAATTTTCATTTCTCCTACCACATTTCTGGAATATGTCAGTTCCCATTTCATGCTAGTTCAATTGTTCCCCACATAAAAGATTCCATGCCACGTTTCTGCTGTCAAGCCTCGCTTCGGGCTTCTACTTCTTTTTCTGAAAATCGTGTGGCTGAAGAGAGGAGTTCTATTTCAATATCTTCCATTGAGATGATTCCAAAGGTTGACAAGAGCGGCAAATTTTGTAGTCCGAGAGCTGCTAGAGAGCTTGCTTTGTAAGATCCACTACTTCCTTTTCACCTTTTTTTTTCTCCAACATATGAATATCTCCTCTCTACCTTTTACGTATTCAAAAAGTTGGCTTACTTGCCAAGATATGGGCTAAGAATTTGTTTAATTTCTAGACTTGTGATAAATTCTAATTCTACTAGATTATTCAATGGCAGGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCTGATCCTGTTCGGCTTTTTGAGAAAAGGTTAAATGCCCGACGAGGTAATCTATGGTAGAGACATGATACATGGTTTTCTGTTACCCCATATACTATTTGGTGTGTGTGTTTTAATATAAAAAAGATCGTGCTGGGGAAATAGATGTCACTCAAATATAAAATCCTGCTTGCTTTTTTTTCTTTGTTTGTACAATTCAGAATCAGGATATGAATTTGACAAGACATCATTGATGGAATATAATCATATGAGCTTTGGAGGTCCGCCGGTTACCGTTGAAACAATTGAAGAGGCAGATGAGCTCTTACGTAAGGATGAAAGGGATTCTACAATTGGTAAACAATTATTTGACCTTCATATAACACACACACACACACATTATTTCTTCTTCTTAATTCACCCATTACTTTATATTAAAAACATGATTGGCTAGAAGAGACAACTATTCATTGAAAAGATGAAAAGTGTAAAAGAGAGACTAATGCTCAAAAGATACAAAATCTCTCAAAGGAGTAAAAAGGAAAAAGAAAAGCAGAAAAATGTTAAGTTTCCACAAACCATAACAAATGATTGATTTACTTAAAAGCTTAACAAAGAACTAATAGATTAACATCAAGCATCGGTATGAACGTTGAGTTGCCCATAGAAGTTGGAGTAGATCTCGAAATACTGCAAGTGTTGCTGACAAATTACGATCTTTAGTTTGGTTAACTTTATTTGACAAAGAAGTTTCTTCTTCTGAGTGTGAACCAATTCTTTGTCAAGATGAGATATCCACGTTATATCAATACTGTATTAGGTTCCATTTTTTTTTTTTTTTTTTTTTGATGAGAAACATATGTATTCATATAACAAAATAGAACAACCTAAGGGCAAGGGACAAAAGGGCCCTCCCCAGAAGAAACTAAAAAATGATGGCGTTCCAATTGCTGAATATCATTGAAAGACTATAATTACAAAAATGTTTGGTGTAATTCATACTCCACCAAGAAGTTGTGTGTTGCAACACCGTCCAAAAAGAATCAAAAGAATTATAGTCATTCTAAAAAATTCTTCTATTCCTTTCTTTCCAAATGTACCACAAAAGGGACCGAGTAGCACATCTCCATAACATGTTTCTTTTCAGGCTATAACCTCTAATGTTGAGCCCTTCAATCAACCAGCTATCAACCTTACTAGGAAGACAAAGCTCCAAATAAAAAATTCTAAACAAAGTGTTCCAAGCTTTCCTAGTAAAAAGACAGTGCAAAAATATGTGGTCCAAGGTTTCCTCTCCTTTGAAGCAAAGGCAACACATCGAGGGGCTAAGCACAGTGTACTGTATTAGGTTCCATAAGAAAGCTCTATATCATGTGAGAAAAGAGCTAAAGATTTGATTTGAGAAGGGCCATCATCAACTTGATTGTGCAAATTGACTCCCACCTTGATTTTTTGAAACGGGGTTTAGAGACCTGTTTTTTGAGCCATCATTCATCAGTAGCGATCTTCATCAAACTTGGCATTTTTCCTTTTAGACGTGCTCCATCATTTTGTCTCCTTGCTGCCTTTGTACTAGGGCTGATTGATGTAGCCTAAGCAACCTCAAAGAGTAATTATCTAAGCACCAAGATTGTTAATCTTTTTATTAGAATGGATAATGTGCTTCATACAAGAGGATAATACTCCTATTTAAGAGTTTTATTACAAGTGATGGGTAAAAATGGAATTAACCTAGAATATTATCTAATTTCCCAACTAACCCCTATTCTTCTTACATCATTCTACCCTTCCAAAAAGAAAACCTGTTCTCGAGTTTTAAGAAGGAAAAAATTATGAAGCAAATAATTAATGAAATAAACTTGTTCAATGGAATATGACCAAACCAACCTCCGATGTTTTATACAAAAATATTATGATAAATTAGATTAAGTTGAGACAAAAAATCCAATATTTCCACCAAAAGAGGAACCTCTCCATTGACCGTAAAGCCAAAAAAGATCTTTTCCTTCATGCTCATTCAAAACCACATTCAATGGACCAATCACTCAAAGTCTAGAACACCACATTCCAAAGAGAATCGTTCAAGAATCATGTCTTCTCTATCATGCGCTTCAAGTTCTTCAACGATTCGATGATCCATTTCGACTACAATCAATGTGTCATTTTCTTATTTGATTTTTGCTTGGTGTTCGTCCTTTCTTCCAATCTTCTTAGTTGGATTTTTCTTCACTTGAGACTATTTCCAGATCAACATTTTCAAATTCTTGTTTTCCTTCAATTTTATCGTCCAGATTTTCTATTTGAAAATTTTCCAACTATGATTCCTTTGTTTTTTCTTCCGTATGTGAAACCAATTTGTTCTTGAAATCTTGCAAATGAATTGATAGTTGATCGATATGTGAGTCATTTTCCCCAATATGTTGGATTTCTTTTGTTATTTTCTTTATTTCCTCCAGTGCTACGGCCTAAGGGATCAAAGTAGTCATTTTGTTTTTGTTTTTTTTTCTCTCTAATCGTTCTTTGGATAAAAAAAAGAAGAAAAAAGTAGTCATTTTGTTAGGGAATTGAATATGTTTAAATCTCATAGTGGGTATAAGACTCATCCATTGACTTTCTTGAATCAACCTTTCTTGATCGTGTTTCATAACCAAAAGAGTAATTTTGAGTCTTGAGCGTTCTTCTAGGGTTGTAAAAATCCATTCTTGACGATTCTTTAGTTCATTGAACTCCCAAGTTCTACGTTGATTTCTTAAAAAATGGGTTTGATCGAATCATTGGGCCGTTTGTCGATATTTCCGTCTTCTTATTCCATCCCAAGCTTTCTTAGAAATATCATCGGAGTCACTAGAATCACTAGAATCAAATTTCCTTTGTGGATAATGATAGGTTCTTTGAGAAGATTGTTTAGTGATATATAATTAAATTTTCCTTCAACCACTAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAATATCGTATCAGAGCAGGTGGTCCAGGAGGTCCTATGTTTAAGCCTCTACATTGTTGTTTCCTCCCCAATTAAAATTAATTTCCACTTGTTAGGCCTTTCAGATATTTCGAGCCCACAAGTAAGGGGGAGTGTTAGTAATTGTAATTAAATTTGCCTTCAACCACTAGCTTAATATTTTGGGTGAATTGGTGGTTTAATAGATTGAACATAGGTAAAAATAGCAAGTTGAAATTCTTCTTCGGAATCACTTTAGTCAAAATTCCAGCACTGTTTTTGGAAGTAAAATTGATTTTCTTGCCTATACAAACTGCTGTGTTTTTCTTGGACATCTTCTTTGATTGGTAATAGTCCTTTCCTCCCCAATTTCTTCTTTCTTTCTTGAAATTTTAAAGGTTCCCCCAAATTAGATGTGTGTTCGACAATAAGCACAACTCATGAAGCTCCTTCTAGTGATTGGCGTCACCAAAAGTTTCTCGATCTTCCATCGTTTGTAGTCAACGTTGGCCCAGGTGGCCGCTCTGAAACTAAAATGATGTAGTCTAAGTAACCTTAAGGAGTAATTATCCAAGAACCAAGACTGTAAATCTTTTTATTAGAATGAATAATGTGTTTCAGACAAGAGGGGAAGGCTCTTATTTATAGAGTTTATTACAAGTGGTGGGTAGAGAGGGAATTAACCTAGAATAGTAACTAATTACCCAATTAACTTCTAGTCTTCTTACATTAGGGGCTCTCTGTTTTTTTTTTTGTTTTAATCCAACACATTTGGTTGTACTTCTTTTCATTTTGTCTACTTCTTTTTCAGTTGTAATGTTTCCCTCTCTTTTGGGCTTCTTTTTTATTCTTTTCATTTCGTCTACTTCTTTGGATTATTTCATTCATCAATAAATTAATTTTTTATTAAAAAAATCCAACCGAATCCATAATTAGGGACTAAGGGTATTTCAATTTTTCCCATGTTTTTACTATAATTGCTAATTCAGTATTGTCTAGCCTCCAAGTCCTCTTTTATTGCGGTTAGTATTAAAATTCTGTTTTCTGCATGACTTACCTCAGAGGCAGAAATCCTCGCAGCCCCACCAAAGATTGTCTACAGCAAACTGATCTTACGGTAAACTTGGTTTATACTCCCCTACCTTTGGCAGAGGATGATAAGATGAAAATTTTGTATCACTTTCATCTATTTTATCAATATTATTCACTTTAAGAATGAAATAAGGCAAGCGATCTTCTTCATGGTTTTCAGGTTTACACGAAAACTTTTGGTTGCAGTTGGGGACGGATGGGACAGTCGTGCGCTTAAAATTGAAAAAGTCATTCCTCCAACTTGGAAGGTCGTGAAAAAAGCTTTTTTTTGTTTACTATTTTATTTTGTGATTCTCTTCTTTATGTTGTTATCATGTGGTTAGAATACTCCTCCTGAATTGATAGGTGGAGGATTATGTCCCTCTCCAAAGGGGGTAGGCTAACTCTTATGCAATTGGTTCTCAACAGCCTTCCTTGTTACTTATTTTCCCTTGCACAAGCCCCGGTTGGTGTTATCAATAGACTGGAAAAGATTATTTGAAATTTTGTTTGGATAGGGTTTATTAATTCGGTTTTCCACATTGTCAAATGGGATTGTTCTTCTCGCCTAATCTCTTATGGTGGCCTTGAGATTGGATCATTTAGGCAAAAGAACACTGCTCTTGTCAATAAATGGCTTTGAAGGTTTAGTAAGGAAGAAACCACTTAATGGAGGCGCTTAATTGTGGCCATTTACGGCTTAGAGGAGAGGGTGGTCTACTAAAGCTCCGAACAGAGGAAGGTCTTATAGATTGTGGGCCGTTATTTTGAAGCATAAGGAGACTTATAAATTCACAGCTTTTTTGTTGGGAGAGGGAACAAAAATCAGATTCTGGAAAGATAGTTGGTGTGGCGTGGAACCGCTTGCATAAAAATTCCTCTACCTTGTTCTCCTTGGCACTGAACAAAGATGCTTTTGTGTCTGAATGTTGGTGTAATGTTACTCATTCGTGGAACTTGGGCCTTAGAAGAAATGTGCTCGATAATGAGCTTGACAACGTGGCCTCAATTCTAAAAAATTTCCATCCTTGGCCCCCTCAGATGGTGGTGATAGTCTTAAATGGACTTCTAACGTTAATGGCAGCTTTACTACAAAGTCTACTTTCCGTAATTTTACCAAGAGATCTCCCTCCATGCTGCTCCTCCGATTCACCACATGTGGAAAACTAAAATCTCGAAAAAGGTGAAATTCTTCTTTTGGTCGCTCGCCTATAGAAGTCTAACACTCGTGAGAAAATTTAAAAAAAAAAAAAAAAATCCAACACATATGCTCAGCCCCTCAATGTTCTGTTCTTGTTTCAAAGATGAGGAGACCCTAAACCACTTATTTTTGCACTCTCTTTACTAGGAAAGCTTGGAACAATTTGTTTAGAATTTTGATTTGGAGCTTTGTCTTCCTAGTAAGGTTGATAGTTGGATGCTGGAAGGGCTTAACATTAGAGGTTATAGTTCGAAAGGAAACATCTTATGGAGATGTGCTACCCAGTTTCTTTTGTGGTGCATTTGGAAATAAAGGAATAGTAGAATTTTTTAAGATAGCTATAACTCTTTTGATTCTTTTTGGACTGTGTTGCAACACACAACTTCTTAGTGGAGTACGAATTACACCAAAGACTTCTGTAATTACAGCCTTTCTATGATTTTCAACAATTGGAAGGTGATTATTCTTTAGCTTCTGTTGGGGAGGGCCCTCTTTGTTTCCAAATTTATTTAAAGATTTTGATTGTTCAATCTTTTAAAGTGAAAGTTGCATTTCTGCTAAACATCATCGACCCAAACCTTGTAAGGGTTCCTCGCCTTTTTACTTCATTCACACTAATGTGTGGGGTCCGTCTAGAGTGTTGGCTTATAGTGGTAAGCGTTGAGTTGGGTTGGTTTGTTACCTTGATCACACTTGTTTAACTTGATTTTATCTTTTAACAAAAAAAATGAAGGTAGAAGAGGTTTTTGTTTGGTTTTACAATATGATTGAGACCTAGTCTCAAACTAAAATCCGCATTCTTCACTCTGATAATAGTACTGAATATTTTAACAAACAATTAACTTATTTTTTGCAAGATAAGGGTATTTTTCCATCAAGCTACATGTCAAGATACTCTTTAGCAAAATGACGTCGTTGAGCGAAAAAATAGATATTTACTTGAAGTTGCTTGTGCCCTTATGCTTTCTATGCATGTACCAAAATATTTGTGTGGTGATGCAGTCCTTACTGCTGCATACCTCATAAATCAAATGCCAACCAAGATTTTGAATTTTAAAACTCCTTTGAGTCGCTTCAAAACGGGTTTTTTCCTACTGTTAGATTGTTTTCTGACTTAACAATAAAAGTATTTGGGTGTATTGTTTATGTTCATATTCTTTACCCTATACTAACTAAACTTGATCCTTGAGCCGTTAAATACATTTCTGTATGCTATGTCTCCCATAAGAAGGCTTTCAAATGTTTTGACCCTTCAACCAAAAAGTTTTTGGAGAGTATGGACGTGCCTTTCTGTCTTCAAAGGGAGACATCTAACCTCGAAGATAATTTCTAGGACACTTCACTTACCCCAGACATCATTGGTCCTGAAATTATGAGTTATAATCCCTTGATGCCAAGTGTGGAAAGTTCTTCTTTAGGGAAGAAACACTACAAAAACCTGAACTTCAGATTTATACTAGAAAAACCTTGCCTCAAAGTAATTGAGAATAAACAGTTGATCTATCATAGGACCAATCTAATTCTTCGATGAATGATTCTGCAGATCTAGGTAACATACATCTCCTTCTCATAATTCTCCCAGTACTTCTCATAATTTTCCTAGTTCTCCTTACCCGATGTCTCTAATCTTGACATTCCAATTGCCCATAGGAAAATCACCCGTAAAGGTGCCAAATATCCCATTGCAAACTATCTTTCTTTATCACAGATTATCTAACAGTCATAAAGCCTTCACATCCAAAATAAACCACCTATTTGTTAGAAGGAATACACAGGAGGCCCTAAATGATTTGAATTGGAAAGTGGCAGTAATGGAAGAGATGAATGCACTGAAACAAAACTGCACATGGGACATAGTTGAACTACCTAAAAACAAGAAAACGGTTGGATGTAAGCGAGTGTTCACTGTATAATGTAAAGCTGATGGTAGTATTGAAAGGTACGAGGTCAGATTGGTTGCTAAGAAATTTACTCTGACCTATGGAGTTGATTATCAAGAAATATTTGCTCCAGTTGCTGAAATTAATTCCATAAGAATTTTGCTACATGTTGCAGTTAATTTTGATTGCCACTTTATCAACTGGATGTTAAGAATGACTTTCTCAATTGGATCATGAAGAAGAGGTATTTATACGTTTGCTACCTGGTTTTGAGGTGATCTCAGGATTAACAAAGTGTGAGTTAAAGTAATCATTATATGAGTCTCCTAGAGTCTGGTTTGAACGTTTTAAAAAAGCAGTCACAAGCTATGGATCTAGTCAAAGTCAAGTCAATCGTACTATGCTCTATAAACATACAGGAAATGACAAGGTTATGTTTTTGATAGTTTATGTTCATGATATCATTTTTGATGAGACATGACTTTCTTGAAGAAAAAGTTAGTTGATGATTTTCAAATCAGACACCTAGGAACTATGAAATATTAACCAGGCATGGAGTTTACTAGGTCCAGAAGTGGCATTCTTGTCAACCGAAGGAAGTATATTTTTTATCTACGGAAAGAAATAGGTTTACTTGGCTGTAGGGTGGTTGAAACTCCTATTAAGCAGAACTTGAAATTAGAAGTTGTTGAAAAAGAAATAAAAGAAAAAGAGAAGTATCAGAGATTTGTGGGGAGACTTACATATCTCGATCACACACGTCCTGACATCGCTTTCGCAGTGAATACTTAGTATGGGAAGTCAGTTCATGCATGCTCCTGGACCAGCTCACTTTGATGTTCACAGAATTCTAATATATTTGAAAAGTACTCTAGGAAAAGGCATATTGTTTTAAAAACATGACCACTAAATGTCGAAGTGTACACTGATACAGATTGGTTAGGTAGTACAACTGATAAAAGAGCCACTTCTGGTTATTGCTTTTGTTGGAGGAAATTTAGTTACTTGATGAAGCAAAAAATAGAGCATGGTTGCGAGTAGCGCAGAAGCAGAATTTAAAGCATCAACCCATGGTATTTGTAAGGGCATATGGATAAGAAGACTATTGGAAGAATTGAGATTCTCCCAGAAAATGCCTATGCTCATTTATTGTGATAACAAGGCAACAATTTCCATTGCCCACAGTCCAGTCCTTCATGATAGGACGGAACATAGTGAAGGTGATAAACACTTTATGAAGGAAAAGATTGTTCAAGGGATAATATGCATCCCTTATCTTTTGAGAACAAAACAAATCGCAAATGTGTTAACTAAAGGTCTTCCAAAATAGCTATTCAACAACTTAATTGAAAAGTTGGCTATGGATGATATCTTAACTTGAGGGGGAGTGTTGATTATTTCCTTTATTGTTAATATTTTCATTGTATTAAAGAAACATTTGTGTATTTGTTTTTTCCTATTTTGTATTGGGTATTTCTTCTATTTAATAAAACCCTTTCTTTCGAAGAGAAATAACAGAAAATACATTCTGCACAACATGTTTTATTATTCTATTCCATAAATCATTCCATCTTCAGACATATCAGTTGCACGGATACAAAGCAAGGATCATGCACTTGGACTTGAACTTCTTGAATTTGCAAATTTTTTAGAATGTTTAAGATTTGTAATAGTTAAGGAGATTAAATATCTCATGCATTCGTATATATTTCAGAACAAGCCAGCAGGACGGATTCTAGAGCTTTGTATTCTCCACCTGGCCATGTCTGAAATAACGGTTATTGGAACAAGGCATCAGATTGTCATTAATGAGGTAAATATGTCTTAAGATGTTTTACATGAAGGTCAAAACCAACATCTCTTATGTCTGTTTGATATCTGTCTAAGATTACTCCCTTTTCTAACATAAATTATTTTTTTGTTAAAAAAAAATATATCGTTCTTGGTTATTGATGAAGGCCGTTGATCTTGCAAAACGATTCTGTGATGGAGCAGCACCTCGTATTATTAATGGGTGCCTTAGGACCTTTGTAAAGGACATCAAAGAGATTGATTCAATGCCTGCTCGAGAGAAGTAAGAAGTCCGTGCATGACCCTGAACTTTTGGGGTGCCTCAGAACCTTTGTAAGGATATCGAAGAATTTGACTCAACTCATGCTGTGGTGCAAGTAAGCATTTCTGAAATCTGAACTTTTGGATAGTTTGTTAACGTGCATGGTTGAGAGTGATTTTGAAATGATTAAAATTTCTTTTACCATGTTTAAAATAATTTCGAAACATGGATGGATGTGATCATTCAATCAATTTAATATTTAATTTTATACTTTTAAATAAAATTTTATATTATTAGAATTGATTTTGAATGACAAAATATATTTCAAAGTAATTTTCATCATTTCAGAATCACTTTCAAACATGCTCGGAACTTGTTACAGTCAACAGCAGCCAAAGTGAAGTGATTTGAAGAATCCCTTGTGCTTGCCGCAATCCTCAGTTAGAATTTCTCTCCCGTTCTCCATGTTGCGGTGGATTTCTGTTATATTTGATTATCCATAGAGTTGAGTAATGGAGGTGCATGAGTGTGAGAGAATGAGTAGTCAGATTTACCCAGTACTGGGCGACATGTTATTATATGCACAATATTATCAGTGTATGAAGTTTTGATAAAGGTGTGATGTCTCGTTTGTACCAACCTCTGTTTATCATGTTTTCATTATGTGTATTTTACTTTGCATTTATTTTTGTGTGATTCCTCACTACTTTGCATGTGGCTCAAAACGTATTATGGGGTAAGGTTAGTTGGTAATCCTTCTTATTCTGAGTTGTGTGCTAAGAAAGTCTGTTTTGTTTATCTCATATGTTTTCCAAAACCTTTTTCTCATTCCGTTTTCTAAAACAGTTTTCTTGCAATCAAGTAAACGTTGCAAGAAAAAACTTGATAGACTAACGATGAATCAGAAGTTAAGTTGGCTGGCTTGTTTGAAGTGCAAAAACAAGTATTGTAACAGGGTTTTAATGGAGGAAGATCGTTAATTTATTTTTCTAATTTAAATCTTACCCTGCTGCATCCTCATGAAATTACAAATAGTTGGAAAAGGCAAAAATAGATTGATTACCATGCTGCATCCTCATAAAATCACTTTTTAAGAATAATTAGTTCTAAAAAGATCAGTATACAAAATAAATATAAGAAACAGAATGAGTCATGTGTTGTCAGTGTTGGTTGTCTATATAGATTGTTGTTAGAGTTGCTATCAGAAGTGGTGGTCTCTAAAACTGGGCTAGAAAGTGGTTTATGTTGAGGTTGGTTGTTGAAGCGATTGACGGAATTGGTCATTGATAGATGGAGTCGTCGATGGTCGTTGATAGATAGATGGAGTCGTCAAAAACATTGGAAGAGAGAGTTGGTTATTTTAATCATTGAACGGTAAATATTGTTATACCAAAACAATGGTTAAAATAACCTTTATCCACACTATCTTATTAACACGTCCCAAATACAATGAGCTATTTTAGAGTACAATGTTCTTTTCACTAAAAGTGTAATTAAGAAAGGAAAATTGCAATTAATAAACATTTCAGCAATA

mRNA sequence

TCCGAGACGGCTTACGCACCACCAAACAAGTCGGAGGAGCTTCCTTCTTCTTCCACTAGGAAATGGCTCTGCCTCCAAGTCCTCTGTGAGTAACGAGAGCTGATTTTGGGGCATTTCACAATGTCTTTAGCTCCACCCACCTCCCTTTATCCCTATTCTTCCCACTCTCATCCCCTCCCCAAATCCCATTTATCTTCCTTTACTCAACGTTCCCATCCCAACTTCTTTTCCTTATGCTTTCCCTTTCATCTTAGTTTCTCCACCTCCTTTTCAACCCTTCACTCCCTTAAATACTCAGCTTTCAAAACCGACACTGGACTCGGAGATTCCCATGATGCTGACCAACCTCATAGTTTGAAATTTGCACCTGGAGCTTCTGCCCACAAGACTCGACTCTTCACCGTTGGGGATAAAGTTATCACTACCAGGCCTAATTTTCATTTCTCCTACCACATTTCTGGAATATGTCAGTTCCCATTTCATGCTAGTTCAATTGTTCCCCACATAAAAGATTCCATGCCACGTTTCTGCTGTCAAGCCTCGCTTCGGGCTTCTACTTCTTTTTCTGAAAATCGTGTGGCTGAAGAGAGGAGTTCTATTTCAATATCTTCCATTGAGATGATTCCAAAGGTTGACAAGAGCGGCAAATTTTGTAGTCCGAGAGCTGCTAGAGAGCTTGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCTGATCCTGTTCGGCTTTTTGAGAAAAGGTTAAATGCCCGACGAGAATCAGGATATGAATTTGACAAGACATCATTGATGGAATATAATCATATGAGCTTTGGAGGTCCGCCGGTTACCGTTGAAACAATTGAAGAGGCAGATGAGCTCTTACGTAAGGATGAAAGGGATTCTACAATTGAGGCAGAAATCCTCGCAGCCCCACCAAAGATTGTCTACAGCAAACTGATCTTACGGTTTACACGAAAACTTTTGGTTGCAGTTGGGGACGGATGGGACAGTCGTGCGCTTAAAATTGAAAAAGTCATTCCTCCAACTTGGAAGAACAAGCCAGCAGGACGGATTCTAGAGCTTTGTATTCTCCACCTGGCCATGTCTGAAATAACGGTTATTGGAACAAGGCATCAGATTGTCATTAATGAGGCCGTTGATCTTGCAAAACGATTCTGTGATGGAGCAGCACCTCGTATTATTAATGGGTGCCTTAGGACCTTTGTAAAGGACATCAAAGAGATTGATTCAATGCCTGCTCGAGAGAAGTAAGAAGTCCGTGCATGACCCTGAACTTTTGGGGTGCCTCAGAACCTTTGTAAGGATATCGAAGAATTTGACTCAACTCATGCTGTGGTGCAAAATCACTTTCAAACATGCTCGGAACTTGTTACAGTCAACAGCAGCCAAAGTGAAGTGATTTGAAGAATCCCTTGTGCTTGCCGCAATCCTCAGTTAGAATTTCTCTCCCGTTCTCCATGTTGCGGTGGATTTCTGTTATATTTGATTATCCATAGAGTTGAGTAATGGAGGTGCATGAGTGTGAGAGAATGAGTAGTCAGATTTACCCAGTACTGGGCGACATGTTATTATATGCACAATATTATCAGTGTATGAAGTTTTGATAAAGGTGTGATGTCTCGTTTGTACCAACCTCTGTTTATCATGTTTTCATTATGTGTATTTTACTTTGCATTTATTTTTGTGTGATTCCTCACTACTTTGCATGTGGCTCAAAACGTATTATGGGGTAAGGTTAGTTGGTAATCCTTCTTATTCTGAGTTGTGTGCTAAGAAAGTCTGTTTTGTTTATCTCATATGTTTTCCAAAACCTTTTTCTCATTCCGTTTTCTAAAACAGTTTTCTTGCAATCAAGTAAACGTTGCAAGAAAAAACTTGATAGACTAACGATGAATCAGAAGTTAAGTTGGCTGGCTTGTTTGAAGTGCAAAAACAAGTATTGTAACAGGGTTTTAATGGAGGAAGATCGTTAATTTATTTTTCTAATTTAAATCTTACCCTGCTGCATCCTCATGAAATTACAAATAGTTGGAAAAGGCAAAAATAGATTGATTACCATGCTGCATCCTCATAAAATCACTTTTTAAGAATAATTAGTTCTAAAAAGATCAGTATACAAAATAAATATAAGAAACAGAATGAGTCATGTGTTGTCAGTGTTGGTTGTCTATATAGATTGTTGTTAGAGTTGCTATCAGAAGTGGTGGTCTCTAAAACTGGGCTAGAAAGTGGTTTATGTTGAGGTTGGTTGTTGAAGCGATTGACGGAATTGGTCATTGATAGATGGAGTCGTCGATGGTCGTTGATAGATAGATGGAGTCGTCAAAAACATTGGAAGAGAGAGTTGGTTATTTTAATCATTGAACGGTAAATATTGTTATACCAAAACAATGGTTAAAATAACCTTTATCCACACTATCTTATTAACACGTCCCAAATACAATGAGCTATTTTAGAGTACAATGTTCTTTTCACTAAAAGTGTAATTAAGAAAGGAAAATTGCAATTAATAAACATTTCAGCAATA

Coding sequence (CDS)

ATGTCTTTAGCTCCACCCACCTCCCTTTATCCCTATTCTTCCCACTCTCATCCCCTCCCCAAATCCCATTTATCTTCCTTTACTCAACGTTCCCATCCCAACTTCTTTTCCTTATGCTTTCCCTTTCATCTTAGTTTCTCCACCTCCTTTTCAACCCTTCACTCCCTTAAATACTCAGCTTTCAAAACCGACACTGGACTCGGAGATTCCCATGATGCTGACCAACCTCATAGTTTGAAATTTGCACCTGGAGCTTCTGCCCACAAGACTCGACTCTTCACCGTTGGGGATAAAGTTATCACTACCAGGCCTAATTTTCATTTCTCCTACCACATTTCTGGAATATGTCAGTTCCCATTTCATGCTAGTTCAATTGTTCCCCACATAAAAGATTCCATGCCACGTTTCTGCTGTCAAGCCTCGCTTCGGGCTTCTACTTCTTTTTCTGAAAATCGTGTGGCTGAAGAGAGGAGTTCTATTTCAATATCTTCCATTGAGATGATTCCAAAGGTTGACAAGAGCGGCAAATTTTGTAGTCCGAGAGCTGCTAGAGAGCTTGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCTGATCCTGTTCGGCTTTTTGAGAAAAGGTTAAATGCCCGACGAGAATCAGGATATGAATTTGACAAGACATCATTGATGGAATATAATCATATGAGCTTTGGAGGTCCGCCGGTTACCGTTGAAACAATTGAAGAGGCAGATGAGCTCTTACGTAAGGATGAAAGGGATTCTACAATTGAGGCAGAAATCCTCGCAGCCCCACCAAAGATTGTCTACAGCAAACTGATCTTACGGTTTACACGAAAACTTTTGGTTGCAGTTGGGGACGGATGGGACAGTCGTGCGCTTAAAATTGAAAAAGTCATTCCTCCAACTTGGAAGAACAAGCCAGCAGGACGGATTCTAGAGCTTTGTATTCTCCACCTGGCCATGTCTGAAATAACGGTTATTGGAACAAGGCATCAGATTGTCATTAATGAGGCCGTTGATCTTGCAAAACGATTCTGTGATGGAGCAGCACCTCGTATTATTAATGGGTGCCTTAGGACCTTTGTAAAGGACATCAAAGAGATTGATTCAATGCCTGCTCGAGAGAAGTAA

Protein sequence

MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSAFKTDTGLGDSHDADQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFSYHISGICQFPFHASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSMPAREK*

Homology

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BLAST of CsGy4G011760 vs. ExPASy Swiss-Prot
Match: Q18B61 (Transcription antitermination protein NusB OS=Clostridioides difficile (strain 630) OX=272563 GN=nusB PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-06
Identity = 29/74 (39.19%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 296 KIEKVIPPTWKNKPAGRI--LELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAP 355
           KI+++I    KN    R+  +++ IL L++ EI  + T +++ INEAV+LAK +CD  +P
Sbjct: 94  KIDELINKHAKNWTVDRMPKVDVSILRLSVCEILYLDTPNKVSINEAVELAKIYCDDKSP 153

Query: 356 RIINGCLRTFVKDI 368
           + ING L + V +I
Sbjct: 154 KFINGILGSVVDEI 167

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BLAST of CsGy4G011760 vs. ExPASy Swiss-Prot
Match: A7GWZ7 (Transcription antitermination protein NusB OS=Campylobacter curvus (strain 525.92) OX=360105 GN=nusB PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.0e-05
Identity = 26/67 (38.81%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 296 KIEKVIPPTWKNKPAGR--ILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAP 355
           ++++++ P  K K   R  I+EL IL L + E+   GT   ++INEA++LAK     +AP
Sbjct: 58  ELDEILKPYLKEKDIERIGIVELAILRLGVYEMKFTGTDKAVIINEAIELAKELGGDSAP 117

Query: 356 RIINGCL 361
           + ING L
Sbjct: 118 KFINGVL 124

[Close]

BLAST of CsGy4G011760 vs. ExPASy Swiss-Prot
Match: B1WXY6 (Transcription antitermination protein NusB OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=nusB PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.0e-05
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 305 WKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFV 364
           W+ K   +I +  IL LA++EI  +    ++ INEAV+LAKR+ D    R ING LR F 
Sbjct: 145 WQLKRLAKI-DQDILRLAVAEILFLDVPEKVSINEAVELAKRYSDDDGYRFINGVLRRFT 204

Query: 365 KDIK 369
             IK
Sbjct: 205 DHIK 207

[Close]

BLAST of CsGy4G011760 vs. ExPASy Swiss-Prot
Match: B1XIZ3 (Transcription antitermination protein NusB OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=nusB PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.6e-05
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 314 LELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSM 373
           L+  IL +A++EI  + T +++ INEAV+LAKR+ D    R ING LR     ++  DS+
Sbjct: 153 LDRDILRIAVAEILFLETPYKVAINEAVELAKRYSDEDGHRFINGVLRRVSDRLRAEDSL 212

[Close]

BLAST of CsGy4G011760 vs. ExPASy Swiss-Prot
Match: Q8GIR7 (Transcription antitermination protein NusB OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=nusB PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-04
Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 314 LELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLR 362
           L+  IL LA +EI  +GT  Q+ INEAV+LA R+ D    R ING LR
Sbjct: 149 LDQDILRLAAAEILFLGTPEQVAINEAVELANRYSDEEGRRFINGVLR 196

[Close]

BLAST of CsGy4G011760 vs. NCBI nr
Match: XP_004149639.3 (uncharacterized protein LOC101216754 isoform X1 [Cucumis sativus] >XP_031739815.1 uncharacterized protein LOC101216754 isoform X1 [Cucumis sativus] >KGN54018.1 hypothetical protein Csa_021656 [Cucumis sativus])

HSP 1 Score: 749 bits (1935), Expect = 7.04e-273
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0


Query: 1   MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA 60
           MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA
Sbjct: 1   MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA 60

Query: 61  FKTDTGLGDSHDADQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFSYHISGICQFPF 120
           FKTDTGLGDSHDADQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFSYHISGICQFPF
Sbjct: 61  FKTDTGLGDSHDADQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFSYHISGICQFPF 120

Query: 121 HASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSP 180
           HASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSP
Sbjct: 121 HASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSP 180

Query: 181 RAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVE 240
           RAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVE
Sbjct: 181 RAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVE 240

Query: 241 TIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKV 300
           TIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKV
Sbjct: 241 TIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKV 300

Query: 301 IPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL 360
           IPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL
Sbjct: 301 IPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL 360

Query: 361 RTFVKDIKEIDSMPAREK 378
           RTFVKDIKEIDSMPAREK
Sbjct: 361 RTFVKDIKEIDSMPAREK 378

[Close]

BLAST of CsGy4G011760 vs. NCBI nr
Match: XP_008449897.1 (PREDICTED: uncharacterized protein LOC103491638 isoform X1 [Cucumis melo])

HSP 1 Score: 684 bits (1766), Expect = 7.30e-247
Identity = 351/389 (90.23%), Postives = 360/389 (92.54%), Query Frame = 0


Query: 1   MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA 60
           MSLAPPTSLY YSSHSHPLPKSHLSSFTQRSHPN F + F FHLSFSTSFSTLHS K SA
Sbjct: 1   MSLAPPTSLYLYSSHSHPLPKSHLSSFTQRSHPNLFPVRFLFHLSFSTSFSTLHSFKSSA 60

Query: 61  FKTDTGLGDSHDA-----------DQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFS 120
           FK D GLGDSHDA           +QPH LKFAPGASAHKTRLF VGDKVITTRPNFHFS
Sbjct: 61  FKIDIGLGDSHDAGQPREQYQVEQEQPHGLKFAPGASAHKTRLFNVGDKVITTRPNFHFS 120

Query: 121 YHISGICQFPFHASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIP 180
            HISGICQFPFHASSIVPH+K+SMPR CCQASLRASTSF ENRVAEERSSIS+SSIE IP
Sbjct: 121 NHISGICQFPFHASSIVPHVKNSMPRLCCQASLRASTSFPENRVAEERSSISVSSIETIP 180

Query: 181 KVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNH 240
           K+DKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLN+RRESGYEFDKTSLMEYNH
Sbjct: 181 KIDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNSRRESGYEFDKTSLMEYNH 240

Query: 241 MSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDG 300
           MSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPK+VYSKLILRFTRKLLVAV DG
Sbjct: 241 MSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKMVYSKLILRFTRKLLVAVVDG 300

Query: 301 WDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCD 360
           WD+RALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCD
Sbjct: 301 WDNRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCD 360

Query: 361 GAAPRIINGCLRTFVKDIKEIDSMPAREK 378
           GAAPRIINGCLRTFVKDIKE DS PAREK
Sbjct: 361 GAAPRIINGCLRTFVKDIKETDSTPAREK 389

[Close]

BLAST of CsGy4G011760 vs. NCBI nr
Match: KAA0040119.1 (NusB/RsmB/TIM44 [Cucumis melo var. makuwa])

HSP 1 Score: 638 bits (1646), Expect = 7.36e-227
Identity = 351/498 (70.48%), Postives = 360/498 (72.29%), Query Frame = 0


Query: 1   MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA 60
           MSLAPPTSLY YSSHSHPLPKSHLSSFTQRSHPN F + F FHLSFSTSFSTLHS K SA
Sbjct: 1   MSLAPPTSLYLYSSHSHPLPKSHLSSFTQRSHPNLFPVRFLFHLSFSTSFSTLHSFKSSA 60

Query: 61  FKTDTGLGDSHDA-----------DQPHSLKFAPGASAHKTRLFTVGDKVITTR------ 120
           FK D GLGDSHDA           +QPH LKFAPGASAHKTRLF VGDKVITTR      
Sbjct: 61  FKIDIGLGDSHDAGQPREQYQVEQEQPHGLKFAPGASAHKTRLFNVGDKVITTRFFFLCP 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 STYSVLILYLLPLSFFNSNSASLILLTMQGMVDAGSVVTFALKISFGSFLSSLKFGYTRW 180

Query: 181 -------------------------------------------PNFHFSYHISGICQFPF 240
                                                      PNFHFS HISGICQFPF
Sbjct: 181 HLDEHRDNTTTILYWSTLGVAPELNRLKSLRADWGEELGGVELPNFHFSNHISGICQFPF 240

Query: 241 HASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSP 300
           HASSIVPH+K+SMPR CCQASLRASTSF ENRVAEERSSIS+SSIE IPK+DKSGKFCSP
Sbjct: 241 HASSIVPHVKNSMPRLCCQASLRASTSFPENRVAEERSSISVSSIETIPKIDKSGKFCSP 300

Query: 301 RAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVE 360
           RAARELALSIVYAACLEGSDPVRLFEKRLN+RRESGYEFDKTSLMEYNHMSFGGPPVTVE
Sbjct: 301 RAARELALSIVYAACLEGSDPVRLFEKRLNSRRESGYEFDKTSLMEYNHMSFGGPPVTVE 360

Query: 361 TIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKV 378
           TIEEADELLRKDERDSTIEAEILAAPPK+VYSKLILRFTRKLLVAV DGWD+RALKIEKV
Sbjct: 361 TIEEADELLRKDERDSTIEAEILAAPPKMVYSKLILRFTRKLLVAVVDGWDNRALKIEKV 420

[Close]

BLAST of CsGy4G011760 vs. NCBI nr
Match: TYK21741.1 (NusB/RsmB/TIM44 [Cucumis melo var. makuwa])

HSP 1 Score: 615 bits (1587), Expect = 3.41e-220
Identity = 313/344 (90.99%), Postives = 321/344 (93.31%), Query Frame = 0


Query: 46  FSTSFSTLHSLKYSAFKTDTGLGDSHDA-----------DQPHSLKFAPGASAHKTRLFT 105
           FSTSFSTLHS K SAFK D GLGDSHDA           +QPH LKFAPGASAHKTRLFT
Sbjct: 9   FSTSFSTLHSFKSSAFKIDIGLGDSHDAGQPREQYQVEQEQPHGLKFAPGASAHKTRLFT 68

Query: 106 VGDKVITTRPNFHFSYHISGICQFPFHASSIVPHIKDSMPRFCCQASLRASTSFSENRVA 165
           VGDKVITTRPNFHFS HISGICQFPFHASSIVPH+K+SMPR CCQASLRASTSF ENRVA
Sbjct: 69  VGDKVITTRPNFHFSNHISGICQFPFHASSIVPHVKNSMPRLCCQASLRASTSFPENRVA 128

Query: 166 EERSSISISSIEMIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRE 225
           EERSSIS+SSIE IPK+DKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLN+RRE
Sbjct: 129 EERSSISVSSIETIPKIDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNSRRE 188

Query: 226 SGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKIVYSKL 285
           SGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPK+VYSKL
Sbjct: 189 SGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKMVYSKL 248

Query: 286 ILRFTRKLLVAVGDGWDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQ 345
           ILRFTRKLLVAV DGWD+RALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQ
Sbjct: 249 ILRFTRKLLVAVVDGWDNRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQ 308

Query: 346 IVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSMPAREK 378
           IVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DS PAREK
Sbjct: 309 IVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKETDSTPAREK 352

[Close]

BLAST of CsGy4G011760 vs. NCBI nr
Match: XP_038901769.1 (uncharacterized protein LOC120088495 isoform X1 [Benincasa hispida])

HSP 1 Score: 595 bits (1533), Expect = 2.30e-211
Identity = 322/393 (81.93%), Postives = 331/393 (84.22%), Query Frame = 0


Query: 1   MSLAPPTSLYPYSSHSHPLPKS----HLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSL 60
           MSLAPP S Y YSSHSHPLPKS    HLSS TQ SH   F      H SFSTS STLHSL
Sbjct: 1   MSLAPPISPYLYSSHSHPLPKSCLPSHLSSLTQCSHSKLFPSHSLSHRSFSTSSSTLHSL 60

Query: 61  KYSAFKTDTGLGDSHDADQP-----------HSLKFAPGASAHKTRLFTVGDKVITTRPN 120
           K    KT  GLGD  DADQP             L FAPGASA  T LFTVGDKVITTRPN
Sbjct: 61  KS---KTHVGLGDLGDADQPCEEYEVELEQLSGLDFAPGASADNTGLFTVGDKVITTRPN 120

Query: 121 FHFSYHISGICQFPFHASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSI 180
           FHFS HISGIC+FPF ASSIVPH+KDSM   C QASLRASTSF EN VAE+RSSIS+SS+
Sbjct: 121 FHFSLHISGICRFPFRASSIVPHVKDSMTHLCPQASLRASTSFPENCVAEDRSSISVSSV 180

Query: 181 EMIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLM 240
           E IPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLN RRE GYEFDKTSLM
Sbjct: 181 ETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNTRRELGYEFDKTSLM 240

Query: 241 EYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVA 300
           EYNHMSFGGPPVTVET+EEADELLRKDE+DS IEAEILAAPPK+VYSKLILRFTRKLLVA
Sbjct: 241 EYNHMSFGGPPVTVETVEEADELLRKDEKDSIIEAEILAAPPKMVYSKLILRFTRKLLVA 300

Query: 301 VGDGWDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAK 360
           V DGWDSR LKIEKVIPPTWK+KPA RILELCILHLAMSEITVIGTRHQIVINEAVDLAK
Sbjct: 301 VVDGWDSRVLKIEKVIPPTWKDKPARRILELCILHLAMSEITVIGTRHQIVINEAVDLAK 360

Query: 361 RFCDGAAPRIINGCLRTFVKDIKEIDSMPAREK 378
           RFCDGAAPRIINGCLRTFVKDIKEIDS  AREK
Sbjct: 361 RFCDGAAPRIINGCLRTFVKDIKEIDSSHAREK 390

[Close]

BLAST of CsGy4G011760 vs. ExPASy TrEMBL
Match: A0A0A0KWZ5 (NusB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G268020 PE=3 SV=1)

HSP 1 Score: 749 bits (1935), Expect = 3.41e-273
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0


Query: 1   MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA 60
           MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA
Sbjct: 1   MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA 60

Query: 61  FKTDTGLGDSHDADQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFSYHISGICQFPF 120
           FKTDTGLGDSHDADQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFSYHISGICQFPF
Sbjct: 61  FKTDTGLGDSHDADQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFSYHISGICQFPF 120

Query: 121 HASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSP 180
           HASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSP
Sbjct: 121 HASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSP 180

Query: 181 RAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVE 240
           RAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVE
Sbjct: 181 RAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVE 240

Query: 241 TIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKV 300
           TIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKV
Sbjct: 241 TIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKV 300

Query: 301 IPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL 360
           IPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL
Sbjct: 301 IPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL 360

Query: 361 RTFVKDIKEIDSMPAREK 378
           RTFVKDIKEIDSMPAREK
Sbjct: 361 RTFVKDIKEIDSMPAREK 378

[Close]

BLAST of CsGy4G011760 vs. ExPASy TrEMBL
Match: A0A1S3BNR2 (uncharacterized protein LOC103491638 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491638 PE=3 SV=1)

HSP 1 Score: 684 bits (1766), Expect = 3.53e-247
Identity = 351/389 (90.23%), Postives = 360/389 (92.54%), Query Frame = 0


Query: 1   MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA 60
           MSLAPPTSLY YSSHSHPLPKSHLSSFTQRSHPN F + F FHLSFSTSFSTLHS K SA
Sbjct: 1   MSLAPPTSLYLYSSHSHPLPKSHLSSFTQRSHPNLFPVRFLFHLSFSTSFSTLHSFKSSA 60

Query: 61  FKTDTGLGDSHDA-----------DQPHSLKFAPGASAHKTRLFTVGDKVITTRPNFHFS 120
           FK D GLGDSHDA           +QPH LKFAPGASAHKTRLF VGDKVITTRPNFHFS
Sbjct: 61  FKIDIGLGDSHDAGQPREQYQVEQEQPHGLKFAPGASAHKTRLFNVGDKVITTRPNFHFS 120

Query: 121 YHISGICQFPFHASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIP 180
            HISGICQFPFHASSIVPH+K+SMPR CCQASLRASTSF ENRVAEERSSIS+SSIE IP
Sbjct: 121 NHISGICQFPFHASSIVPHVKNSMPRLCCQASLRASTSFPENRVAEERSSISVSSIETIP 180

Query: 181 KVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNH 240
           K+DKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLN+RRESGYEFDKTSLMEYNH
Sbjct: 181 KIDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNSRRESGYEFDKTSLMEYNH 240

Query: 241 MSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDG 300
           MSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPK+VYSKLILRFTRKLLVAV DG
Sbjct: 241 MSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKMVYSKLILRFTRKLLVAVVDG 300

Query: 301 WDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCD 360
           WD+RALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCD
Sbjct: 301 WDNRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCD 360

Query: 361 GAAPRIINGCLRTFVKDIKEIDSMPAREK 378
           GAAPRIINGCLRTFVKDIKE DS PAREK
Sbjct: 361 GAAPRIINGCLRTFVKDIKETDSTPAREK 389

[Close]

BLAST of CsGy4G011760 vs. ExPASy TrEMBL
Match: A0A5A7TFT7 (NusB/RsmB/TIM44 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00940 PE=3 SV=1)

HSP 1 Score: 638 bits (1646), Expect = 3.57e-227
Identity = 351/498 (70.48%), Postives = 360/498 (72.29%), Query Frame = 0


Query: 1   MSLAPPTSLYPYSSHSHPLPKSHLSSFTQRSHPNFFSLCFPFHLSFSTSFSTLHSLKYSA 60
           MSLAPPTSLY YSSHSHPLPKSHLSSFTQRSHPN F + F FHLSFSTSFSTLHS K SA
Sbjct: 1   MSLAPPTSLYLYSSHSHPLPKSHLSSFTQRSHPNLFPVRFLFHLSFSTSFSTLHSFKSSA 60

Query: 61  FKTDTGLGDSHDA-----------DQPHSLKFAPGASAHKTRLFTVGDKVITTR------ 120
           FK D GLGDSHDA           +QPH LKFAPGASAHKTRLF VGDKVITTR      
Sbjct: 61  FKIDIGLGDSHDAGQPREQYQVEQEQPHGLKFAPGASAHKTRLFNVGDKVITTRFFFLCP 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 STYSVLILYLLPLSFFNSNSASLILLTMQGMVDAGSVVTFALKISFGSFLSSLKFGYTRW 180

Query: 181 -------------------------------------------PNFHFSYHISGICQFPF 240
                                                      PNFHFS HISGICQFPF
Sbjct: 181 HLDEHRDNTTTILYWSTLGVAPELNRLKSLRADWGEELGGVELPNFHFSNHISGICQFPF 240

Query: 241 HASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISISSIEMIPKVDKSGKFCSP 300
           HASSIVPH+K+SMPR CCQASLRASTSF ENRVAEERSSIS+SSIE IPK+DKSGKFCSP
Sbjct: 241 HASSIVPHVKNSMPRLCCQASLRASTSFPENRVAEERSSISVSSIETIPKIDKSGKFCSP 300

Query: 301 RAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVE 360
           RAARELALSIVYAACLEGSDPVRLFEKRLN+RRESGYEFDKTSLMEYNHMSFGGPPVTVE
Sbjct: 301 RAARELALSIVYAACLEGSDPVRLFEKRLNSRRESGYEFDKTSLMEYNHMSFGGPPVTVE 360

Query: 361 TIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKV 378
           TIEEADELLRKDERDSTIEAEILAAPPK+VYSKLILRFTRKLLVAV DGWD+RALKIEKV
Sbjct: 361 TIEEADELLRKDERDSTIEAEILAAPPKMVYSKLILRFTRKLLVAVVDGWDNRALKIEKV 420

[Close]

BLAST of CsGy4G011760 vs. ExPASy TrEMBL
Match: A0A5D3DDJ4 (NusB/RsmB/TIM44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001130 PE=3 SV=1)

HSP 1 Score: 615 bits (1587), Expect = 1.65e-220
Identity = 313/344 (90.99%), Postives = 321/344 (93.31%), Query Frame = 0


Query: 46  FSTSFSTLHSLKYSAFKTDTGLGDSHDA-----------DQPHSLKFAPGASAHKTRLFT 105
           FSTSFSTLHS K SAFK D GLGDSHDA           +QPH LKFAPGASAHKTRLFT
Sbjct: 9   FSTSFSTLHSFKSSAFKIDIGLGDSHDAGQPREQYQVEQEQPHGLKFAPGASAHKTRLFT 68

Query: 106 VGDKVITTRPNFHFSYHISGICQFPFHASSIVPHIKDSMPRFCCQASLRASTSFSENRVA 165
           VGDKVITTRPNFHFS HISGICQFPFHASSIVPH+K+SMPR CCQASLRASTSF ENRVA
Sbjct: 69  VGDKVITTRPNFHFSNHISGICQFPFHASSIVPHVKNSMPRLCCQASLRASTSFPENRVA 128

Query: 166 EERSSISISSIEMIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRE 225
           EERSSIS+SSIE IPK+DKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLN+RRE
Sbjct: 129 EERSSISVSSIETIPKIDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNSRRE 188

Query: 226 SGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKIVYSKL 285
           SGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPK+VYSKL
Sbjct: 189 SGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKMVYSKL 248

Query: 286 ILRFTRKLLVAVGDGWDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQ 345
           ILRFTRKLLVAV DGWD+RALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQ
Sbjct: 249 ILRFTRKLLVAVVDGWDNRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQ 308

Query: 346 IVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSMPAREK 378
           IVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DS PAREK
Sbjct: 309 IVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKETDSTPAREK 352

[Close]

BLAST of CsGy4G011760 vs. ExPASy TrEMBL
Match: A0A1S4DXQ5 (uncharacterized protein LOC103491638 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491638 PE=3 SV=1)

HSP 1 Score: 520 bits (1340), Expect = 6.62e-184
Identity = 261/275 (94.91%), Postives = 268/275 (97.45%), Query Frame = 0


Query: 104 PNFHFSYHISGICQFPFHASSIVPHIKDSMPRFCCQASLRASTSFSENRVAEERSSISIS 163
           PNFHFS HISGICQFPFHASSIVPH+K+SMPR CCQASLRASTSF ENRVAEERSSIS+S
Sbjct: 15  PNFHFSNHISGICQFPFHASSIVPHVKNSMPRLCCQASLRASTSFPENRVAEERSSISVS 74

Query: 164 SIEMIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTS 223
           SIE IPK+DKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLN+RRESGYEFDKTS
Sbjct: 75  SIETIPKIDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNSRRESGYEFDKTS 134

Query: 224 LMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLL 283
           LMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPK+VYSKLILRFTRKLL
Sbjct: 135 LMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKMVYSKLILRFTRKLL 194

Query: 284 VAVGDGWDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDL 343
           VAV DGWD+RALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDL
Sbjct: 195 VAVVDGWDNRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDL 254

Query: 344 AKRFCDGAAPRIINGCLRTFVKDIKEIDSMPAREK 378
           AKRFCDGAAPRIINGCLRTFVKDIKE DS PAREK
Sbjct: 255 AKRFCDGAAPRIINGCLRTFVKDIKETDSTPAREK 289

[Close]

BLAST of CsGy4G011760 vs. TAIR 10
Match: AT4G26370.1 (antitermination NusB domain-containing protein )

HSP 1 Score: 318.9 bits (816), Expect = 5.4e-87
Identity = 157/220 (71.36%), Postives = 182/220 (82.73%), Query Frame = 0


Query: 149 SENRVAEERSSISISSIEMI--PKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFE 208
           S  R A    +IS   ++ +  PK+DKSG+  SPRAARELAL I+YAACLEGSDP+RLFE
Sbjct: 64  SPTRSALRTPTISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEGSDPIRLFE 123

Query: 209 KRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAP 268
           KR+NARRE GYEFDK+SL+EYNHMSFGGPPV  ET EE DEL+R DE++S IEAE+L+AP
Sbjct: 124 KRINARREPGYEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKIEAEVLSAP 183

Query: 269 PKIVYSKLILRFTRKLLVAVGDGWDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEI 328
           PK+VYSKL+LRF +KLL AV D WDS  + IEK+ PP WK+ PAGRILE  ILHLAMSE+
Sbjct: 184 PKLVYSKLVLRFAKKLLAAVVDKWDSHVVIIEKISPPDWKSAPAGRILEFSILHLAMSEV 243

Query: 329 TVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKD 367
            V+ TRH IVINEAVDLAKRFCDG+APRIINGCLRTFVKD
Sbjct: 244 AVLETRHPIVINEAVDLAKRFCDGSAPRIINGCLRTFVKD 283

[Close]

BLAST of CsGy4G011760 vs. TAIR 10
Match: AT4G26370.2 (antitermination NusB domain-containing protein )

HSP 1 Score: 149.1 bits (375), Expect = 7.4e-36
Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 149 SENRVAEERSSISISSIEMI--PKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFE 208
           S  R A    +IS   ++ +  PK+DKSG+  SPRAARELAL I+YAACLEGSDP+RLFE
Sbjct: 64  SPTRSALRTPTISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEGSDPIRLFE 123

Query: 209 KRLNARRESGYEFDKTSLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEIL 264
           KR+NARRE GYEFDK+SL+EYNHMSFGGPPV  ET EE DEL+R DE++S I   ++
Sbjct: 124 KRINARREPGYEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKIGRSLI 180

The following BLAST results are available for this feature:

BLAST of CsGy4G011760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q18B61	2.7e-06	39.19	Transcription antitermination protein NusB OS=Clostridioides difficile (strain 6...	[more]
A7GWZ7	3.0e-05	38.81	Transcription antitermination protein NusB OS=Campylobacter curvus (strain 525.9...	[more]
B1WXY6	5.0e-05	43.75	Transcription antitermination protein NusB OS=Crocosphaera subtropica (strain AT...	[more]
B1XIZ3	8.6e-05	41.67	Transcription antitermination protein NusB OS=Synechococcus sp. (strain ATCC 272...	[more]
Q8GIR7	1.9e-04	52.08	Transcription antitermination protein NusB OS=Synechococcus elongatus (strain PC...	[more]

BLAST of CsGy4G011760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149639.3	7.04e-273	100.00	uncharacterized protein LOC101216754 isoform X1 [Cucumis sativus] >XP_031739815....	[more]
XP_008449897.1	7.30e-247	90.23	PREDICTED: uncharacterized protein LOC103491638 isoform X1 [Cucumis melo]	[more]
KAA0040119.1	7.36e-227	70.48	NusB/RsmB/TIM44 [Cucumis melo var. makuwa]	[more]
TYK21741.1	3.41e-220	90.99	NusB/RsmB/TIM44 [Cucumis melo var. makuwa]	[more]
XP_038901769.1	2.30e-211	81.93	uncharacterized protein LOC120088495 isoform X1 [Benincasa hispida]	[more]

BLAST of CsGy4G011760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWZ5	3.41e-273	100.00	NusB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G268020 PE=3 S...	[more]
A0A1S3BNR2	3.53e-247	90.23	uncharacterized protein LOC103491638 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TFT7	3.57e-227	70.48	NusB/RsmB/TIM44 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G0094...	[more]
A0A5D3DDJ4	1.65e-220	90.99	NusB/RsmB/TIM44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G0011...	[more]
A0A1S4DXQ5	6.62e-184	94.91	uncharacterized protein LOC103491638 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CsGy4G011760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26370.1	5.4e-87	71.36	antitermination NusB domain-containing protein	[more]
AT4G26370.2	7.4e-36	64.10	antitermination NusB domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006027	NusB/RsmB/TIM44	PFAM	PF01029	NusB	coord: 281..365 e-value: 2.7E-10 score: 40.6
IPR035926	NusB-like superfamily	GENE3D	1.10.940.10		coord: 180..374 e-value: 1.7E-18 score: 68.9
IPR035926	NusB-like superfamily	SUPERFAMILY	48013	NusB-like	coord: 178..368
IPR011605	NusB antitermination factor	PANTHER	PTHR11078	N UTILIZATION SUBSTANCE PROTEIN B-RELATED	coord: 117..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G011760.2	CsGy4G011760.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0031564	transcription antitermination
biological_process	GO:0006353	DNA-templated transcription, termination
molecular_function	GO:0003723	RNA binding