CsGy4G010610 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G010610
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein RRP6-like 2
Location	Gy14Chr4: 9742228 .. 9751983 (-)
RNA-Seq Expression	CsGy4G010610
Synteny	CsGy4G010610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGCACATTCGCCCTCTCACGTGACATACCCTTCTCTCTCTACCCTAATATTTTCTCTCACTTCTATTCTCATTTCTCTTCTCTTTTCTCTTCTCTCTTCTCTCACAGTGAAGTATATGCGAAGCCGAAACGAAGTTCTTCTCTACAACTCTTCTCCGGAACCCTAACCGTCGATAACCTCAACGGGGAATCCCTCTCATCTCCGGCGAGCCATCTCTGAGCTTGCAACAATATGGACGTCGATCAGTCTGATTCTCAGAAGGCTCAGACTCTCCAATCCCTAACCACTGGTTCTCTTGGTTCGTCTCTCTCCAAGCTCGCCGCCTCTTCTCGGGCCATTCCCGCCGAAAAGGACTTTCACTTTTATTACAACTTTGACGAATTCAAAATCCCAATACGGACCATCGAGCGCCAATCTCAATCGATGCTTGAAACCATTGGCTCTTCCGCCGAAGTTTGGGGTAAGGAAATGGCGTTCCCTGAGGATACCGACGACGCGTATGATTGGTTGGTTAATGTTAATGATGAGATTTTTGAACGGTTCGATGTGTCGCTGGATGAGTTTCAGAAGATTCGGAAGGAGGAGGAGGAGGAGAGTGGGAGGGCACTGGCTTTGACCGCAGACCCTGATGATGGGTTTCAGTTGGTGTGTGGGAAGAAGAAGAAAACTCCGACTCATGAAGATGAGATGCATGATTCGAGTTTTGAGTCGAGTGTGAAGGTTGCTACCAAGGATAGGAAAACTTTAGGGGTGAAGCCGAAAGTGCCATTTCATATACCAACTATCCGTAGACCACAGGACGAGTTTAATATTTTGGTTAATAATTCTAACCAGCCTTTCGAGCATGTCTGGTTGCAAAGGAGTGAAGATGGCATCCGGTTTGTACATCCACTGGTTAGTTTAACCTCCTTTGGCTGTTATGGTTTTAAGTGTTAGTTTTTCATTTTCTTTGATTACAAGGGAGGAAGGATATCGTGCTTGGCTAGTTAGCTTATTTTGGAAATTTAATGGCTCCCAAAAAAGGACCAAATTTTATTGGCCAGAAGTTCTTGGCTTGTCTTCTGTAAACTTGCTCTGTGGTTTAGCTGGGATAGCGATTGAATTTCAATGGGATTAGCAAATGTATAGTGTGTATCTATTTTTCATGAGCACATATTGTTTTGTGGAAGCTGAGAGCTGTTGCTTACTTCATTTTACTTGTTTGTGCAGGAGAAGCTTTCTGTATTGGACTTTGTTGATAAGATTAGTGAAGATTTTCAACCTATCTATCCACCATCTTTGGATTGTACTCCTTTCAAATTCATAGAGGAAGTCAATGATTTGAAGGAACTGGCAGCTAAACTGCGAGGGGTGAACGAATTTGCGGTACGGAATTGTTATTAGTTTAATTTTGTGTCATAGACTCATAATTAGTAAGCTTGTATGATTAAAAGGAATTGTTAGTAATTTAATTTTATAGAAGGTCTTTCTCATACAATTTTAGAGAAAGGCCGTTTTTCTATTTGTGGATGTTTGTGCCGGGGGAGACAATAGATCGTTTTGAGGTATGGATAGGATAGGTGAGGTATGATCCTTATCGTGGTTCCATGTTTCTCTTTGGACTTTGGTTTTGAAGACTTTCTATTATTATGCTCTAGGCAATATCCTACATGGTTCCATTTGTATGCCTTTGTATTATTTCATTTTTTCTTAATGAAAGTAGTTATTTCTATTAAAAAAAATGAAGAATTACTTAGAATTGACTGTATTTAGACAGTGTTTTAAATTATTTTGGGGTAGCAAATGCTTTCTTCCCAAACTTTCATGTTTGCATTATTAATTTGAGTTGGGCAAGGAATCAATCAAATGCACAAATATGAATTCAAGACTAGTTGCAATATTATGAAATAAATCAGAGTTGGCCTTTAATTTGCAATGGGACATAGTACAGTTAGTAAAACTAATTTCTAATGGTATGGTTTTATGCATAGATATCTAACACTCACTTTTGATGTGCAGTCTATATTCGCATTTACTTTCTAATTTTGATTTCTGTGTTCTGTCATTTAATGCACGGTATTGATCTCTTAGGTTGATTTGGAACATAATCAGTATCGGTCTTTTCAAGGACTTACCTGTCTGATGCAAATTTCTACAAGAACTGAGGATTATGTTGTAGATACATTGAAGCTTAGAATTCATGTGGGGCCCTATCTGAGAGAGGTTTTCAAGGATCCTTCAAAGAAAAAGGTGAAAGTTGGAGATGAAGTGTTTTTTGTAGATACATTGAAGCTTAGTTTGCGTGGGGTTTTATTATAATATTCATACTCATCTAGGTGCTGCATGGAGCAGATCGAGACGTTGTATGGCTTCAACGAGATTTTGGGATTTATATATGCAACTTATTTGACACTGGACAGGTCGTGTTTTTAAAGCCATTATCTTGGATCCATTCAAGTATTTGTTTCCTTTGTCTTTTTATGGCTGTTCCTCTTGTTAAATTCTCTTAGGTCTACATTAAGATAATGTTCTGCAGGTTACAATCTCATTCATAGGTGCATCATTGAAAATTTATTTCTGTTTAGAAAAGAAATTGCATTCCTAGATTCTTGCATTAACTTGTCCCCTCAGATGTATATAGTTTTATCCAAAACAAATAGTAAATAAGATGGGACCTTTATCCTTTTTTTCCACTTTTAATTATGGAATCGAGAGGTTTTTGCCCACGTGTCCTTTTGTCTATCGTTTTGTTTTTCTATCTGGAAAAAAAATGGTGGTCAGATTACAGTATCTACTTGTTCTTCCCTTATTTACACTTGTGCTTTAGTTCTTGCATTAGTATTTTAGTGTCTTCAAATTACTATGTGAGTGGATGTTTTTGTTCTTTTATCATCGCCCTTTATCATTGTCTTCACAAATTATACAACTTCTCGTAAAAAAAATTTCAAAGGTATCCTGACATTTGATAATAGGTTTTCCAATGATTATAGGAGCTAGAACGACTTTGATTTTCTGATTATAACAAAATTCATCATCGCTGGCCATTTTTTAAAACTGGTGGCCCTTGGGTTCTGTTTCCGAAAATAAGTGATTGATTTATGGTTAATTTTTCTTTCAAGGATTATCTATCTTTGGACTTCTTTTGAGAATGCAGGGCCTTATTTTTCTGTGTTTTAACTTTAAGAGGACGAATAACTGTTGACTTTATTCATACATTTTTTATCCTCAGGCTTCAAGAGTATTAAAACTGGAAAGAAATAGTCTGGAGTATCTCCTTCATCACTTTTGTGGTGTTGCAGCCAATAAAGAGTAGGAACTTTCTCTCTCTGCATCTGGATACTTTATGTGTGGAATTGAATGGGTCTTTTTCTGTAGCTTTAACAGTTAAAATTTGTTACAGGTACCAAAATGCAGACTGGAGATTAAGACCTCTCCCTGAGGAGATGGTGAGGTATAAACGTCGTTGGTTCTTGTCATGCTGTTTTTCTTTTGTTCCTATTAGTTACACCTTTGTTTATATATTTTTCTCCTGGACGGTGCCAGTTATTCTATTGCATTATTATTTCTCTTCTTTAGTAATCTTTGCGTGGATGCATTTGATTTGACCATGTGAAGTTGGTGAGATAAGATAAATGTTGTAAGGTCTTTATGCATGTGGTCTACATTTAAAACAAACTTGATAAGGAGAAAATAGGCCGCTGTTATGCAATGATGCTTAAGTTAAAAGATCAGTGCAATTTTTCTCATATGGAGATTTCTGTAAGAGTATTTGGTGTAATTAGTGTTATATTTTCCCTGTAAGTGTCCAACAAGTCATGGATGTATTGAACAAAGTACCCAAGTCTATTCTTTAAAGCATGTGATATTGCATGAAGTTTTCTTTGGTTGTACATTTTTCATCACATCCTTACTAACGTTTCTTTAACTTCATATCTTTTAATCACAGATATGCACGGGAAGATACACATTATTTGTTGTATATTTACGATTTGATGAGGATGAAACTGGCCTCAATGCCTCGTGAATCTGAAGAATCTGATCTTCCTCTGGTAGAGGTATAGTTGCTATCGACATCTTTTGCTATTTTGTTAGGAAAAACAGAAATTTTTGGATTTGGGGAAATGTGTTTGAGCTTTGTTCAGCTACCTTTAAAATTGATCCACTTGTTTGCATTACAAAGTGTAGATTCTCTTTAAATGATAGGATATTGAGTTTTTCATTTCCTTTTCTAATATTACTTGTTTTTAAAACTTGGAATCTGAATGGATTTCATTCTGCTAAGAGATATGATATAGAGCTGATGGAAAAGTGTATGTACCTTTTCTGGATTAAGATTATATTCATTCTTTCATTCTGCCTTTCTAAAGCCTGACGTTGCTACAAGTATGGAAATAAAAATTACAGGTTGCATCGCCACCGCATCATCTTCAGCATTTTAAAAATTTTAGTTAAGGACTTATTCTGCCAGATGAGATTTGTCCAATAACATCATGAAATCTGTTTTGTTTTACACTCATCCAGGTGATCTCAATTTTTTTTTTAAAAAAATTAATTTAAAAAAAGACATAGGTCTTTTTTGGCATTGGTATTGGGTTGTTGCCAGTAAGATCTCAAAAGTTGCACTTCATGTTTTCCTTGAAAGAAAGAAAAACAAAAAAAGGGGTTGCACTATATGCTTTCTTTTTTTAAACTTGGATATGGTCTGATGAAACTGATTCTTGAAGACAGTCTTCAAAGAAAATACTTCTCAATTCTTAATATTAATTGCAGATGGGGTACCTTATATAGGCTCAACCAACGTTCAAAAACTTACAAAGTATTGACTAGTAGCCGGTCAAGTGATGACTGAAAACTATAACTAGACTAACTTTTGACTACTGTAGCTAAGTCTAACTCTAAGGGGCTTACCAAAAAGAAGTTACCTGTTTAAGTTATTCAATCCAGGGTAATTGACTTTGATAGGGAGAGCTTAAATAAGAAATATTAATCCTTGCTTTCTTATTACCTCTTACCAATTTTTGCTCTTGATGCAAAAATTATGGTTCTACTCAAACTAGAAGCATATCAGTTTCATGCTAGCACTTGCCCTGTGTCCACAAAGGATTTGTTAACCATTTTCTCTCATCGTCATGGAAAGTCAAGTGTCACTTGAAGAAATTTTGTTTTTTGTTTGTGTTTTTTAATATTTATTTATGCGGTAAGGAAACAAACTTTTTATTGATGCAATGAAAAGAAAAACAGCCCAATGCTCAAAATATAATCACACAATTAAAAGTAATAATACAAACTTATATTAGCAGAACATAAAACTTATTCACGAAAAATAAATGATTTCCAATTTAAACTTAAGTCTTGAATAGAAAAGCTAATTGAAAACACTCCGACCACAAAGATCTTTTCTCGAAAGATCTGTTGGTTATGTTCAAACTAATTTTTAGTAGGAATAGCTTTTGCCAGATTAACCCATAGAAGATGAGAATTAGGCACTTTCCACCTTCTCTCTGTCTCTCCTTTTCTAATCACAAAACCCACTTTTTCTTGAGATAGAATGGATGGATATAAAATGCACAATGAGCACCCAACAAAAGGAAATGTTCAAGCTCACATTGTTGAATCACCCTTTTTGTTAATATAATGATAATGAGCCAATCCCAAGCTTCATTGCAATCATTTGTTACTATAACAATATCTCTGCTACCAAAGTTGACATCTTTATCAGTGCAATGGTGTAAAGAGGAGGTGCCCCTTTGGTATATTTCATATATTCAATGAAATATTTTGTTTATCATCATAAGTTTTTTTCAAGTTGCTCCAACTTTATCATGACCTTTTATGTTTTTATTTTCTTTCAATTAAGAGGCACTGCTAATTGCATCTTCGACTGAAATTATAAATCTCTTTTTTACCATATTTCCAGGATTGATATTTGAGATGAAAGCCCTTTTCTGGTGTCACATTTAATTGTTTTTGGGAAATTTGGGATCTGATATTCAATATGGTTCAATATAGGAGATCAGCTTTAATTTTGTTACTTTTTTTTTCATGAACCAACCATTATTTTGTAGGTTTACAAGAGAAGTCATGACGTATGTATGCATCTTTACGAGAAGGAGCTGTTGACAGAAAGTTCATATCTTTATGTATACGGGTTAGTTTTCTCCATTCTTGGGTAAAAAGGACATCACCATTTGCTATTCTTCACTTCTCCTCCAGCTGGTGAAATCTCTCTTTTTCTTTACGCTTTGCATTTAGTGAAAAATTTAGGTTTTCATAAGTAATGTCCTAATTTCTATTTATTTTAATATAGGTTACAGGGTTCTGGTTTTGATGCTCAACAGCTTGCTGTTGCTGCAGTAAGCTTTCTTACACTTTACATTTTATCTGTAGTATATCTGCATCTAGATGGTAACAGGGATGAAGACCTCTTACAAATATCTTATTTCTTTAATGCCAAAAAATGGGGTCAAGCTGTGCAGCCAATTTGCTCATAAAATTAGAAAAAAGGACATCTTGCAGAAAAAATAATGGATTGCTAGTGTAAAACCGTTCTTCACAGACAATGTGTGACAATTTTTCTCTAAATTTGAGGTTCCAGCCATACGTCATCTGTCTCAGTAGAATCCCCTATCTGATAAATCTAAAAACATTTTAGACTTGTCGTCACCTTTCTCCCCAACCCTTGAAAAAACAAAAGAGCCATTTCCCACTTGACAGGAGTACCACTAACTCCAGCTCCAATAAACGTTCTTAGAAATGACATAAATTGGCTGTAAATTGTTTGGAAAGAACAAAAACCTAATTCATTAGAGGCTAGATCATATCTCCTATTCAATTTATGTCACTGGAAGATAAATAGCCTTATTTAATTTTGACAATGTGACAGGGTCTCTTTGAGTGGCGAGATGTTGTTGCTCGTGCAGAGGATGAAAGTACTGGTTATATATTGCCAAACAAAACGCTACTGGAAATCGGTAACTGGGAAAGCTATGTTGGCATTTGTTGTTGGAAATGATCTTATGTTTGTGTGGCTTACTGCAGAGTTTTAACATTTTTTCTTATTGTTAAAGCCAAACAGATGCCTGTCACTGTTAACAAATTACGTAGACTACTGAAATCAAAGCATCCATATATTGAGCGGAATCTTGCTTCAATTGTTACCATCATTAGGCATTCGATGCTTAATTCTTGTGCATTTGAAGAGGCTGCTCAGCGTTTGAAGGAAGTCCGTGCAGAGGCGGTAAGGCTTGTGCTTGTAACCTCGTGCTGTTGATTAACTGTCACACCACCTAAAGCCACATAACTATGATTAACGAGTTCAAGAACATTTCCCTAGGAGTTTAAGGGCATGACCTTCAATGAATTTGTGGTGATTAGAGATATAATTAGTGCCAGTATTATTTAATCCATTAGATGTTAGAAATAAATGAGAAGAAGGGACATTTATTCTTGTTGTCAGCGGCTTTATGCTGTGTCTAGGATTGAAAAGGACTTAAGGAGGAGGATTGTTGTGGCTTCTGAGTTTGTAACTAAAAGACTTAACTAATTCTTTTTGGAAGCCCGAGGGATATTGACAGACTAACAACTGATCTTTCGAGTTGCAAACTTATTATTCTATTTGTAAGTTGATTAATATTATAATTTGGAAGTCTAATCTATCTTTTAATTTTTATTCTAACTTGCCCTTTCGCAGATTTTTTTTCCACGTTGTTGGTAGTGATATTTTTTAGTATTCAATTGCCTTCACTCTTCTATGTATTTTACACGACAGGCATCAGAAGAAAATGCATCAGCTAATGAACACCAAGAAACTAATATTCCCGATACAATCCTGAATATGAAGAACAGTGCTGTTGATAATACTCCCAGTGATCGAGTTTGTTCGCCCTCTTCTCAGTCTAAAGTTGCACCCTTGGAACGTGGATACCGACCCTTTGTACCTGGTAAATGTGTGAAGGTAGATCATTCTCTGCATCCAGTTCTAAATGGGAGCAGACATATCTCTCCAGTAGGCCCAACAACATCGGAGCCGAGCAAACACTCGAATGGCGATAAATATCCAGTAGCACATGTATTGAAATATCTCTAAGTAACCATGGTTAGAGACTAATTTGGGCTTTGCTTGATATTTATACTCTATATGATTTCCTGTTTCAGGTCACTGGAGTGAACATTTCATTGCAAAAGAAGACTAACCGAGGTCTTGGGTCACTGTTGGGAAACTCTGCCCCAAAGAGAAAATTAGATATTGATAAAAAGGTAGGTCCCTTTGGTGTAACGTGTAAGATACCATTTCTTTTACTTCCCCTTTAGCTGGCCTCATTGTGTGCCTAATTTTTTTAGGATAAGGAAGAGAGCAAGTTGGATAAAATCAGATCTTCTGTGACTCTGCCCTTTCATTCTTTCTTGGGAACAAGTGAGCAGTTGAAGTCAGTTGCAGAACCGACCACTGTGACTGCGTTAAAAACTCAAAATTCTGAACTACCTGCTGCTGAGTCAGCCAAAAGCTCAAATGTAGAGCCTCCTGCAGTGCCAGTTCCAAAACCCTTCCCGACCGATGAGATTATCATGTTGGAAGATGATTCAGATGACAATGTCGAAGATGAAGACGAAGACGAAGACGAAGAATTGCGCGCTGTTGATGAAGCAACTGGTGAACCAAAGTTGAAGGGTTTAAGTGCTAGTTCACCTCTTGAAATTGACGACGACGACGAACCAATGTCTTTGTCTGAATTGTCTTCTAGCTTTCAAAAATGTTTGAATTCGAACGAAAAAGCTATGAATGTTGGGGAAACTGATAATCCAGGAAACCAAAGTGACTTTTTGCAAATTAAACCGTTCGACTATGAAGCAGCAAGGAAAGTAGTATTCGGAGAAGATTTGGAGGAGGACTTGGAACCTGAGAATGACAAAGATCCAAAGGCATCAAAGAATGCTGGGGCAAAGTTAGATTTAGGTCTAGATAGAGTTCAAAAGAACAGTGGCACCGTGGAATTACCGCAAGGCAAACGACGCCATGCCTTCCCTGCAACTGGAAACCGAAGTGCAACTTTCCGTTAAATCAATGTAAGTGATTTTTCCTCTGTAAAATACAGACATTACTAGTATGGTATTACTAGTCAAAAGATTTCAGGTATTAAAATGGAAAAAAGAAGAAAAAAGAAAGTATTACCAAGTTGTTTTAAAAGAGTGATCTTGCTTGTTTTCAATTTGGTTAGGGGGTACTAATCTTAGATTAGAATGATCAATATAATGACCCTCTTTTCCTCCTCAACTCATAATTATTACTGATTTACTCACAGCAGTGTAAAGAATTGGGCAACCTTTACAACAAAATTACATTAAATTATCATAAGCGGGTTCATGTAACTATTCTCAAACGACGTTAGAATTGAGGCGAATTTGAGAATGAGAACATTGATATTGTTTTTATTCAATGGTCGACCCTTAGGAGTTTTATCAACTTTCTCAAACATAACTACCAAGTCATGGGATGTTTGTAACTTTTGCAATGAAGCTGTTACTAACCAGTTTGATTAATTAATGTGTTTCGTATATCACTTTAGGAAATTGTTATTAATGATCTTTTGTCTATTCTTGGCTTCCCATGGGGTCTAGGTGTATAAGCAAATTTTCACCTTCATAGAGTTGATGGTGAAAATACTACACAACTTATGCATGTGAAATTTTGTTATAGTTTAGTTTAGAAGTTTGTTTGAAATATAAAAAACAAAAGAAAATAGAACTAGCAACTGGAAAATATCTTATCTTCTGGAAG

mRNA sequence

CGTGCACATTCGCCCTCTCACGTGACATACCCTTCTCTCTCTACCCTAATATTTTCTCTCACTTCTATTCTCATTTCTCTTCTCTTTTCTCTTCTCTCTTCTCTCACAGTGAAGTATATGCGAAGCCGAAACGAAGTTCTTCTCTACAACTCTTCTCCGGAACCCTAACCGTCGATAACCTCAACGGGGAATCCCTCTCATCTCCGGCGAGCCATCTCTGAGCTTGCAACAATATGGACGTCGATCAGTCTGATTCTCAGAAGGCTCAGACTCTCCAATCCCTAACCACTGGTTCTCTTGGTTCGTCTCTCTCCAAGCTCGCCGCCTCTTCTCGGGCCATTCCCGCCGAAAAGGACTTTCACTTTTATTACAACTTTGACGAATTCAAAATCCCAATACGGACCATCGAGCGCCAATCTCAATCGATGCTTGAAACCATTGGCTCTTCCGCCGAAGTTTGGGGTAAGGAAATGGCGTTCCCTGAGGATACCGACGACGCGTATGATTGGTTGGTTAATGTTAATGATGAGATTTTTGAACGGTTCGATGTGTCGCTGGATGAGTTTCAGAAGATTCGGAAGGAGGAGGAGGAGGAGAGTGGGAGGGCACTGGCTTTGACCGCAGACCCTGATGATGGGTTTCAGTTGGTGTGTGGGAAGAAGAAGAAAACTCCGACTCATGAAGATGAGATGCATGATTCGAGTTTTGAGTCGAGTGTGAAGGTTGCTACCAAGGATAGGAAAACTTTAGGGGTGAAGCCGAAAGTGCCATTTCATATACCAACTATCCGTAGACCACAGGACGAGTTTAATATTTTGGTTAATAATTCTAACCAGCCTTTCGAGCATGTCTGGTTGCAAAGGAGTGAAGATGGCATCCGGTTTGTACATCCACTGGAGAAGCTTTCTGTATTGGACTTTGTTGATAAGATTAGTGAAGATTTTCAACCTATCTATCCACCATCTTTGGATTGTACTCCTTTCAAATTCATAGAGGAAGTCAATGATTTGAAGGAACTGGCAGCTAAACTGCGAGGGGTGAACGAATTTGCGGTTGATTTGGAACATAATCAGTATCGGTCTTTTCAAGGACTTACCTGTCTGATGCAAATTTCTACAAGAACTGAGGATTATGTTGTAGATACATTGAAGCTTAGAATTCATGTGGGGCCCTATCTGAGAGAGGTTTTCAAGGATCCTTCAAAGAAAAAGGTGCTGCATGGAGCAGATCGAGACGTTGTATGGCTTCAACGAGATTTTGGGATTTATATATGCAACTTATTTGACACTGGACAGGCTTCAAGAGTATTAAAACTGGAAAGAAATAGTCTGGAGTATCTCCTTCATCACTTTTGTGGTGTTGCAGCCAATAAAGAGTACCAAAATGCAGACTGGAGATTAAGACCTCTCCCTGAGGAGATGGTGAGATATGCACGGGAAGATACACATTATTTGTTGTATATTTACGATTTGATGAGGATGAAACTGGCCTCAATGCCTCGTGAATCTGAAGAATCTGATCTTCCTCTGGTAGAGGTTTACAAGAGAAGTCATGACGTATGTATGCATCTTTACGAGAAGGAGCTGTTGACAGAAAGTTCATATCTTTATGTATACGGGTTACAGGGTTCTGGTTTTGATGCTCAACAGCTTGCTGTTGCTGCAGGTCTCTTTGAGTGGCGAGATGTTGTTGCTCGTGCAGAGGATGAAAGTACTGGTTATATATTGCCAAACAAAACGCTACTGGAAATCGCCAAACAGATGCCTGTCACTGTTAACAAATTACGTAGACTACTGAAATCAAAGCATCCATATATTGAGCGGAATCTTGCTTCAATTGTTACCATCATTAGGCATTCGATGCTTAATTCTTGTGCATTTGAAGAGGCTGCTCAGCGTTTGAAGGAAGTCCGTGCAGAGGCGGCATCAGAAGAAAATGCATCAGCTAATGAACACCAAGAAACTAATATTCCCGATACAATCCTGAATATGAAGAACAGTGCTGTTGATAATACTCCCAGTGATCGAGTTTGTTCGCCCTCTTCTCAGTCTAAAGTTGCACCCTTGGAACGTGGATACCGACCCTTTGTACCTGGTAAATGTGTGAAGGTAGATCATTCTCTGCATCCAGTTCTAAATGGGAGCAGACATATCTCTCCAGTAGGCCCAACAACATCGGAGCCGAGCAAACACTCGAATGGCGATAAATATCCAGTAGCACATGTCACTGGAGTGAACATTTCATTGCAAAAGAAGACTAACCGAGGTCTTGGGTCACTGTTGGGAAACTCTGCCCCAAAGAGAAAATTAGATATTGATAAAAAGGATAAGGAAGAGAGCAAGTTGGATAAAATCAGATCTTCTGTGACTCTGCCCTTTCATTCTTTCTTGGGAACAAGTGAGCAGTTGAAGTCAGTTGCAGAACCGACCACTGTGACTGCGTTAAAAACTCAAAATTCTGAACTACCTGCTGCTGAGTCAGCCAAAAGCTCAAATGTAGAGCCTCCTGCAGTGCCAGTTCCAAAACCCTTCCCGACCGATGAGATTATCATGTTGGAAGATGATTCAGATGACAATGTCGAAGATGAAGACGAAGACGAAGACGAAGAATTGCGCGCTGTTGATGAAGCAACTGGTGAACCAAAGTTGAAGGGTTTAAGTGCTAGTTCACCTCTTGAAATTGACGACGACGACGAACCAATGTCTTTGTCTGAATTGTCTTCTAGCTTTCAAAAATGTTTGAATTCGAACGAAAAAGCTATGAATGTTGGGGAAACTGATAATCCAGGAAACCAAAGTGACTTTTTGCAAATTAAACCGTTCGACTATGAAGCAGCAAGGAAAGTAGTATTCGGAGAAGATTTGGAGGAGGACTTGGAACCTGAGAATGACAAAGATCCAAAGGCATCAAAGAATGCTGGGGCAAAGTTAGATTTAGGTCTAGATAGAGTTCAAAAGAACAGTGGCACCGTGGAATTACCGCAAGGCAAACGACGCCATGCCTTCCCTGCAACTGGAAACCGAAGTGCAACTTTCCGTTAAATCAATGTAAGTGATTTTTCCTCTGTAAAATACAGACATTACTAGTATGGTATTACTAGTCAAAAGATTTCAGGTATTAAAATGGAAAAAAGAAGAAAAAAGAAAGTATTACCAAGTTGTTTTAAAAGAGTGATCTTGCTTGTTTTCAATTTGGTTAGGGGGTACTAATCTTAGATTAGAATGATCAATATAATGACCCTCTTTTCCTCCTCAACTCATAATTATTACTGATTTACTCACAGCAGTGTAAAGAATTGGGCAACCTTTACAACAAAATTACATTAAATTATCATAAGCGGGTTCATGTAACTATTCTCAAACGACGTTAGAATTGAGGCGAATTTGAGAATGAGAACATTGATATTGTTTTTATTCAATGGTCGACCCTTAGGAGTTTTATCAACTTTCTCAAACATAACTACCAAGTCATGGGATGTTTGTAACTTTTGCAATGAAGCTGTTACTAACCAGTTTGATTAATTAATGTGTTTCGTATATCACTTTAGGAAATTGTTATTAATGATCTTTTGTCTATTCTTGGCTTCCCATGGGGTCTAGGTGTATAAGCAAATTTTCACCTTCATAGAGTTGATGGTGAAAATACTACACAACTTATGCATGTGAAATTTTGTTATAGTTTAGTTTAGAAGTTTGTTTGAAATATAAAAAACAAAAGAAAATAGAACTAGCAACTGGAAAATATCTTATCTTCTGGAAG

Coding sequence (CDS)

ATGGACGTCGATCAGTCTGATTCTCAGAAGGCTCAGACTCTCCAATCCCTAACCACTGGTTCTCTTGGTTCGTCTCTCTCCAAGCTCGCCGCCTCTTCTCGGGCCATTCCCGCCGAAAAGGACTTTCACTTTTATTACAACTTTGACGAATTCAAAATCCCAATACGGACCATCGAGCGCCAATCTCAATCGATGCTTGAAACCATTGGCTCTTCCGCCGAAGTTTGGGGTAAGGAAATGGCGTTCCCTGAGGATACCGACGACGCGTATGATTGGTTGGTTAATGTTAATGATGAGATTTTTGAACGGTTCGATGTGTCGCTGGATGAGTTTCAGAAGATTCGGAAGGAGGAGGAGGAGGAGAGTGGGAGGGCACTGGCTTTGACCGCAGACCCTGATGATGGGTTTCAGTTGGTGTGTGGGAAGAAGAAGAAAACTCCGACTCATGAAGATGAGATGCATGATTCGAGTTTTGAGTCGAGTGTGAAGGTTGCTACCAAGGATAGGAAAACTTTAGGGGTGAAGCCGAAAGTGCCATTTCATATACCAACTATCCGTAGACCACAGGACGAGTTTAATATTTTGGTTAATAATTCTAACCAGCCTTTCGAGCATGTCTGGTTGCAAAGGAGTGAAGATGGCATCCGGTTTGTACATCCACTGGAGAAGCTTTCTGTATTGGACTTTGTTGATAAGATTAGTGAAGATTTTCAACCTATCTATCCACCATCTTTGGATTGTACTCCTTTCAAATTCATAGAGGAAGTCAATGATTTGAAGGAACTGGCAGCTAAACTGCGAGGGGTGAACGAATTTGCGGTTGATTTGGAACATAATCAGTATCGGTCTTTTCAAGGACTTACCTGTCTGATGCAAATTTCTACAAGAACTGAGGATTATGTTGTAGATACATTGAAGCTTAGAATTCATGTGGGGCCCTATCTGAGAGAGGTTTTCAAGGATCCTTCAAAGAAAAAGGTGCTGCATGGAGCAGATCGAGACGTTGTATGGCTTCAACGAGATTTTGGGATTTATATATGCAACTTATTTGACACTGGACAGGCTTCAAGAGTATTAAAACTGGAAAGAAATAGTCTGGAGTATCTCCTTCATCACTTTTGTGGTGTTGCAGCCAATAAAGAGTACCAAAATGCAGACTGGAGATTAAGACCTCTCCCTGAGGAGATGGTGAGATATGCACGGGAAGATACACATTATTTGTTGTATATTTACGATTTGATGAGGATGAAACTGGCCTCAATGCCTCGTGAATCTGAAGAATCTGATCTTCCTCTGGTAGAGGTTTACAAGAGAAGTCATGACGTATGTATGCATCTTTACGAGAAGGAGCTGTTGACAGAAAGTTCATATCTTTATGTATACGGGTTACAGGGTTCTGGTTTTGATGCTCAACAGCTTGCTGTTGCTGCAGGTCTCTTTGAGTGGCGAGATGTTGTTGCTCGTGCAGAGGATGAAAGTACTGGTTATATATTGCCAAACAAAACGCTACTGGAAATCGCCAAACAGATGCCTGTCACTGTTAACAAATTACGTAGACTACTGAAATCAAAGCATCCATATATTGAGCGGAATCTTGCTTCAATTGTTACCATCATTAGGCATTCGATGCTTAATTCTTGTGCATTTGAAGAGGCTGCTCAGCGTTTGAAGGAAGTCCGTGCAGAGGCGGCATCAGAAGAAAATGCATCAGCTAATGAACACCAAGAAACTAATATTCCCGATACAATCCTGAATATGAAGAACAGTGCTGTTGATAATACTCCCAGTGATCGAGTTTGTTCGCCCTCTTCTCAGTCTAAAGTTGCACCCTTGGAACGTGGATACCGACCCTTTGTACCTGGTAAATGTGTGAAGGTAGATCATTCTCTGCATCCAGTTCTAAATGGGAGCAGACATATCTCTCCAGTAGGCCCAACAACATCGGAGCCGAGCAAACACTCGAATGGCGATAAATATCCAGTAGCACATGTCACTGGAGTGAACATTTCATTGCAAAAGAAGACTAACCGAGGTCTTGGGTCACTGTTGGGAAACTCTGCCCCAAAGAGAAAATTAGATATTGATAAAAAGGATAAGGAAGAGAGCAAGTTGGATAAAATCAGATCTTCTGTGACTCTGCCCTTTCATTCTTTCTTGGGAACAAGTGAGCAGTTGAAGTCAGTTGCAGAACCGACCACTGTGACTGCGTTAAAAACTCAAAATTCTGAACTACCTGCTGCTGAGTCAGCCAAAAGCTCAAATGTAGAGCCTCCTGCAGTGCCAGTTCCAAAACCCTTCCCGACCGATGAGATTATCATGTTGGAAGATGATTCAGATGACAATGTCGAAGATGAAGACGAAGACGAAGACGAAGAATTGCGCGCTGTTGATGAAGCAACTGGTGAACCAAAGTTGAAGGGTTTAAGTGCTAGTTCACCTCTTGAAATTGACGACGACGACGAACCAATGTCTTTGTCTGAATTGTCTTCTAGCTTTCAAAAATGTTTGAATTCGAACGAAAAAGCTATGAATGTTGGGGAAACTGATAATCCAGGAAACCAAAGTGACTTTTTGCAAATTAAACCGTTCGACTATGAAGCAGCAAGGAAAGTAGTATTCGGAGAAGATTTGGAGGAGGACTTGGAACCTGAGAATGACAAAGATCCAAAGGCATCAAAGAATGCTGGGGCAAAGTTAGATTTAGGTCTAGATAGAGTTCAAAAGAACAGTGGCACCGTGGAATTACCGCAAGGCAAACGACGCCATGCCTTCCCTGCAACTGGAAACCGAAGTGCAACTTTCCGTTAA

Protein sequence

MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIERQSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEEESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKYPVAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDSDDNVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNEKAMNVGETDNPGNQSDFLQIKPFDYEAARKVVFGEDLEEDLEPENDKDPKASKNAGAKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR*

Homology

[Close]

BLAST of CsGy4G010610 vs. ExPASy Swiss-Prot
Match: A9LLI7 (Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 7.8e-249
Identity = 499/948 (52.64%), Postives = 621/948 (65.51%), Query Frame = 0


Query: 1   MDVDQSD-SQKAQTLQSLTTG-SLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTI 60
           MDVD+S  S K ++L+ L  G S  S+LS+L++SSR IP  +DFHFYYNFDEFK PI  I
Sbjct: 6   MDVDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEI 65

Query: 61  ERQSQSMLETIGSSAEVWGKEMAFPEDTDDAY--DWLVNVNDEIFERFDVSLDEFQKIRK 120
              SQS L TIG S +VWGK M FP D DD Y  DWL NVNDE+ ERFDVS+DEFQ+IRK
Sbjct: 66  TGTSQSTLATIGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRK 125

Query: 121 EEEEESGRALALTADPDDGFQLVCGKKKK----TPTHEDEMHDSSFESSVKVATKDRKTL 180
            +E+E GR++ +  D DDGFQ+V GKKKK      T    ++       VK+A +D+ + 
Sbjct: 126 -KEKEIGRSV-VADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNSS 185

Query: 181 GVKPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDK 240
           G K KVPFH+PTI++PQ+E+NILVNN+N PFEHVWL+RSED +R +HPLEK SVLDFVDK
Sbjct: 186 G-KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVDK 245

Query: 241 ISEDFQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQ 300
              + +P+ P  L+ TPFKF++EV DLKEL AKLR V EFAVDLEHNQYRSFQGLTCLMQ
Sbjct: 246 DVNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLMQ 305

Query: 301 ISTRTEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDT 360
           ISTRTEDY+VDT KLRIH+GPYLRE+FKDP KKKV+HGADRD++WLQRDFGIY+CNLFDT
Sbjct: 306 ISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFDT 365

Query: 361 GQASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYD 420
           GQASRVL LERNSLE+LL HFCGV ANKEYQNADWR+RPLPEEM RYAREDTHYLLYIYD
Sbjct: 366 GQASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYD 425

Query: 421 LMRMKLASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQ 480
           L++++L  M ++   +D PL+EVYKRS+DVC  LYEKELLTE+SYL+VYGLQ +GF+A Q
Sbjct: 426 LIKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNAAQ 485

Query: 481 LAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNL 540
           LA+ AGL EWRD +ARAEDESTGY+LPNK LLEIAK+MP +V KLRR+LKSKHPYIERN+
Sbjct: 486 LAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIERNV 545

Query: 541 ASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENAS-ANEHQETNIPDTILNMKNSAV 600
            S+V++IR SM +  AFE AA  LK+V      ++N    +E ++ +  D          
Sbjct: 546 DSVVSVIRQSMQHYAAFESAALSLKDVSPGNVMDKNIEPISEKKDLHTGD---------- 605

Query: 601 DNTPSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPS 660
                  V SPS +   + LE      +          L   L GS  +S          
Sbjct: 606 -------VASPSLKENSSQLESTRDLIMGAANTNEGRGLGSGLFGSAKVSAA-------- 665

Query: 661 KHSNGDKYPVAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSV 720
                            + + KK + GLG+LLGN+A K+K   D+K KE+ KL++IRSSV
Sbjct: 666 -----------------VRISKKPSSGLGALLGNAASKKKSRTDEKVKEDVKLEQIRSSV 725

Query: 721 TLPFHSFLGTSEQLKSVAE--PTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTD 780
            L FHSF       KS +E  P      +  +S +PA+ S +                 D
Sbjct: 726 NLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSSTMPASVSKE-----------------D 785

Query: 781 EIIMLEDDSDDNVE-DEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSEL 840
            +  L+DDS++  E         E +      G+  L  L      ++D +DEPMSLSEL
Sbjct: 786 GVKELKDDSEEASEIVGTSGRVSESKVSSSEMGDIIL--LENGDEKKVDAEDEPMSLSEL 845

Query: 841 SSSFQKCLNSNEKAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDK 900
           S++FQKC  S  K+    +      Q++FL I+PFDYEAARK V FG         E  K
Sbjct: 846 STNFQKCFKSMNKSKKAQK------QTEFLNIEPFDYEAARKEVKFG---------EGHK 869

Query: 901 DPKASKNAGAKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 936
             +  + A A    G  + Q   G     QGKRR AFPA+GNRS +F+
Sbjct: 906 GRQGKREAAAGQKKGSTQEQSEFG-----QGKRRQAFPASGNRSMSFK 869

[Close]

BLAST of CsGy4G010610 vs. ExPASy Swiss-Prot
Match: Q0WVE8 (Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.2e-169
Identity = 341/686 (49.71%), Postives = 436/686 (63.56%), Query Frame = 0


Query: 103 RFDVSLDEFQKIRKEEEEESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSV 162
           RFD  +DEF++ RK EE                                   DS     V
Sbjct: 2   RFDDPMDEFKRNRKMEE-----------------------------------DSKKVIDV 61

Query: 163 KVATKDRKTLGV-KPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPL 222
           KVA  D+      K +VPFHIPT+ +PQ+E+ ILV+N+N PFEHV L++SEDG+RF+HPL
Sbjct: 62  KVAESDKGFAKFGKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPL 121

Query: 223 EKLSVLDFVDKISEDFQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQY 282
           E+LSV+DFVD+   + +P+ P  L+ TPFK +EEV DL++LAA L+ V EFAVDLEHNQY
Sbjct: 122 EELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQY 181

Query: 283 RSFQGLTCLMQISTRTEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRD 342
           R+FQGLTCLMQISTRTEDY+VD  KL  H+GPYLRE+FKDP KKKV+HGADRD++WLQRD
Sbjct: 182 RTFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRD 241

Query: 343 FGIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAR 402
           FGIY+CNLFDTGQASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 FGIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301

Query: 403 EDTHYLLYIYDLMRMKLASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVY 462
           EDTHYLLYIYD+MRM+L +M +E E+SD PLVEVYKRS+DVCM LYEKEL T  SYL+VY
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361

Query: 463 GLQGSGFDAQQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLL 522
           G+Q    +A QL++ AGL EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ V +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421

Query: 523 KSKHPYIERNLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASAN-EHQETNIP 582
           KSK PY+ERN  +++++IR SM N+ AFE   Q LK+ R E   E N     E  +T   
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481

Query: 583 DTILNMKNSAVDNTPSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHI 642
            + L+++   VD++        SS   V PL+R     +      V+ ++ P        
Sbjct: 482 ASSLSLEKVCVDDSKKQ-----SSGFGVLPLKRK----LESDKTVVEKNIEP-------- 541

Query: 643 SPVGPTTSEPSKHSNGDKYPVAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKE 702
             +  T +E S  S   K        V +   KK + G G LL     KRK + D K KE
Sbjct: 542 -KIEKTGTEASASSLSSK-------KVCVDDSKKQSSGFGVLLS----KRKFESDNKVKE 601

Query: 703 ESKLDKIRSSVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAV 762
           E K+ K +    +         +  +S  + T       + SE P+  S       P   
Sbjct: 602 EVKVSKSKPDKVIIVVDDDDDDDDDESYEQSTKAADALDRVSETPSKGS-------PSLT 616

Query: 763 PVPKPFPTDEIIMLEDDSDDNVEDED 787
             PK   T+ I++ +DD  ++ EDED
Sbjct: 662 QKPKTCNTEVIVLDDDDDSESREDED 616

[Close]

BLAST of CsGy4G010610 vs. ExPASy Swiss-Prot
Match: Q01780 (Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2)

HSP 1 Score: 306.6 bits (784), Expect = 9.6e-82
Identity = 205/585 (35.04%), Postives = 303/585 (51.79%), Query Frame = 0


Query: 21  SLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIERQSQSMLETIGSSAEVWG--- 80
           +LGS ++   AS        ++ FY +F  F+      E Q   +L+ +    +  G   
Sbjct: 39  ALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQ---AFCETQGDRLLQCMSRVMQYHGCRS 98

Query: 81  --KEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEEESGRALALTADPDDG 140
             K+ +   + +D +D LV+ ND I ER  + LDE   + K ++      L +       
Sbjct: 99  NIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSS 158

Query: 141 FQLVC---GKKKKTPT----HEDEMHDSSFESSVKVATKDRKTLG---VKPKVPFHIPTI 200
           +       GKK K+ T    H   +     +   K+   +   L    +KP     +P  
Sbjct: 159 WNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQA 218

Query: 201 ------RRPQDEFNIL-VNNSNQPFEHVWLQRSEDGIRFVHPLE-KLSVLDFVDKISEDF 260
                  RPQD    L V  +   F H    +  +   F HP + +L+     D + +  
Sbjct: 219 LSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELNHFTPADAVLQKP 278

Query: 261 QPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRT 320
           QP     ++ TP  FI  +++L EL  KL    EFAVDLEH+ YRSF GLTCLMQISTRT
Sbjct: 279 QPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTRT 338

Query: 321 EDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASR 380
           ED+++DTL+LR  +   L E   DP+  KV HGAD D+ WLQ+DFG+Y+ N+FDT QA+R
Sbjct: 339 EDFIIDTLELRSDM-YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAAR 398

Query: 381 VLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMK 440
           +L L R+SL++LL  +C V +NK+YQ ADWR+RPLPEEM+ YAR+DTHYLLYIYD MR++
Sbjct: 399 LLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLE 458

Query: 441 LASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAA 500
              M        + L  V++RS D+C+  + K + T+ SYL +Y  Q    + QQL    
Sbjct: 459 ---MWERGNGQPVQLQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQ 518

Query: 501 GLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVT 560
            LF WRD  AR EDES GY+LPN  +L+IA+++P     +        P + + +  +  
Sbjct: 519 LLFAWRDKTARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHL 578

Query: 561 IIRHSMLNSCAFEEAAQRLKEVRAEAASE--ENASANEHQETNIP 581
           +I+ +        E A  +K+     ++E  EN     H  ++ P
Sbjct: 579 LIQQAREMPLLKSEVAAGVKKSGPLPSAERLENVLFGPHDCSHAP 616

[Close]

BLAST of CsGy4G010610 vs. ExPASy Swiss-Prot
Match: P56960 (Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2)

HSP 1 Score: 304.3 bits (778), Expect = 4.8e-81
Identity = 208/599 (34.72%), Postives = 309/599 (51.59%), Query Frame = 0


Query: 21  SLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIERQSQSMLETIGSSAEVWG--- 80
           +LGS ++   AS        ++ FY +F  F+      E Q   +L+ +    +  G   
Sbjct: 39  ALGSVVAVTKASGGLPQFGDEYDFYRSFPAFQ---AFCETQGDRLLQCMSRVMQYHGCRS 98

Query: 81  --KEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEEESGRALALTADPDDG 140
             K+ +   + +D +D LV+ ND I ER  + LDE   + K ++      L +       
Sbjct: 99  NIKDRSKVTELEDKFDLLVDTNDVILERVGMLLDEASGVNKHQQPVLPAGLQVPKTIVSS 158

Query: 141 FQLVC---GKKKKTPT----HEDEMHDSSFESSVKVATKDRKTLG---VKPKVPFHIPTI 200
           +       GKK K+ T    H   +         K+   +   L    VKP     +P  
Sbjct: 159 WNRKAGEYGKKAKSETFRLLHAKNIVRPQLRFREKIDNSNTPFLPKIFVKPNARKPLPLA 218

Query: 201 ------RRPQDEFNIL-VNNSNQPFEHVWLQRSEDGIRFVHPLE-KLSVLDFVDKISEDF 260
                  RPQD    L V  +   F H    +  +   F HP + +L        + +  
Sbjct: 219 LSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELDHFTPPQSVLQRP 278

Query: 261 QPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRT 320
           +P    ++  TP   +  +++L EL  KL G  EFAVDLEH+ YRSF GLTCLMQISTRT
Sbjct: 279 KPQLYRAVGETPCHLVSSLDELVELNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRT 338

Query: 321 EDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASR 380
           ED++VDTL+LR  +   L E   DP+  KV HGAD D+ WLQ+DFG+Y+ N+FDT QA+R
Sbjct: 339 EDFIVDTLELRSDM-YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAAR 398

Query: 381 VLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMK 440
           +L L R+SL++LL  +CGV +NK+YQ ADWR+RPLPEEM+ YAR+DTHYLLYIYD MR++
Sbjct: 399 LLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLE 458

Query: 441 LASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAA 500
           L           + L  V++RS D+C+  + K + T+ SYL +Y  Q    ++QQL    
Sbjct: 459 LW---ERGNHQPVQLQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQ 518

Query: 501 GLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVT 560
            LF WRD  AR EDES GY+LPN  +L+IA+++P     +        P + + +  +  
Sbjct: 519 LLFAWRDKTARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHL 578

Query: 561 IIRHSMLNSCAFEEAAQRLKEVRAEAASE--ENASANEHQETNIPDTILNMKNSAVDNT 595
           +I+ +        E A  +++     ++E  EN     H  ++ P    N +N++ D T
Sbjct: 579 LIQQAREMPLLKSENAAGVRKSGPLPSAERLENDLFGPHDCSHAPPD--NYQNTSTDGT 628

[Close]

BLAST of CsGy4G010610 vs. ExPASy Swiss-Prot
Match: Q10146 (Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp6 PE=3 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 1.5e-66
Identity = 189/610 (30.98%), Postives = 292/610 (47.87%), Query Frame = 0


Query: 38  AEKDFHFYYNFD-EFKIPIRTIERQSQSMLETIGSSAE-VWGKEMAFPEDTDDAYDWLVN 97
           A+ D  FY + D EF   I+++  +   ++E + S  +    +++   ED D+ +  + +
Sbjct: 21  AKVDIPFYKSIDTEFNENIKSVSSRFMRLIELLLSKVDRSRAEDIVDVEDIDNRWAEVSD 80

Query: 98  VNDEIFERFDVSLDEFQKIRKEEEEESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHD 157
             D +FE+ D S+D+ Q + K+   E+    A T+D       V  KK K          
Sbjct: 81  TLDILFEKADYSIDKAQGLLKKPAIETH---ASTSD-------VANKKPK---------- 140

Query: 158 SSFESSVKVATKDRKTLGVKPKVPF---HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSE 217
                              K K+P+   H   + +PQ  F +  NNS    E VW  +  
Sbjct: 141 -------------------KEKLPYKVIHAAHLTKPQLRFRVQPNNSR---EFVWSWKLT 200

Query: 218 DGIRFVHPLEKLSVLDFVD-----KISEDFQP-----IYPP------------SLDCTPF 277
           +    + PLEK+     +D      +   ++P     +YPP            S+D T  
Sbjct: 201 EKPHSLVPLEKIIAQVKLDPSLKNSLPHPYEPEIQNSVYPPWVSEMSNPIDTGSVDETEP 260

Query: 278 KFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDYVVDTLKLRIH 337
            ++   + L ++  +L+   E AVDLEH+ YRSF+G  CLMQIS R +D++VDTL+LR  
Sbjct: 261 IWVSTESQLSDMLKELQNSKEIAVDLEHHDYRSFRGFVCLMQISNREKDWIVDTLELREE 320

Query: 338 VGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLL 397
           +   L  VF +P+  KV HGA  D++WLQRDFG+Y+ NLFDT  A++VL  E + L +LL
Sbjct: 321 L-EALNVVFTNPNIIKVFHGATMDIIWLQRDFGLYVVNLFDTYYATKVLGFEGHGLAFLL 380

Query: 398 HHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLASMPRESEESDL 457
             +C   A+K YQ ADWR+RPLP EM++YA+ DTHYLLYI+D +R +L S   E +E+  
Sbjct: 381 QKYCDYDADKRYQMADWRIRPLPREMLKYAQSDTHYLLYIWDHLRNELISKSAERKEN-- 440

Query: 458 PLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGF-------------DAQQLAVAA 517
            +  V+  S  + +  YE E      Y  +YGL   G+               + L +  
Sbjct: 441 LMQSVFNSSKQISLRKYELE-----PYDPIYGLGTDGWRNVLTKFGSSKIIGREALMIYR 500

Query: 518 GLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVT 577
            L +WRD VAR EDES  Y+LPN+ L+ IA   PV    +  + K   P     +  IV 
Sbjct: 501 ALHDWRDSVARKEDESVRYVLPNRLLIAIAASKPVEAADVFSISKQLTPIARMYVEDIVK 560

Query: 578 IIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSD 608
           ++              Q  +++  E    E +   E ++ N P  + +  N+  D     
Sbjct: 561 VV--------------QEAEKLYNEQVDREKSQFKEVEKQNQPLAVFSESNTLGDYKVDS 566

[Close]

BLAST of CsGy4G010610 vs. NCBI nr
Match: XP_004149112.1 (protein RRP6-like 2 [Cucumis sativus] >KGN53919.1 hypothetical protein Csa_019147 [Cucumis sativus])

HSP 1 Score: 1826 bits (4731), Expect = 0.0
Identity = 935/936 (99.89%), Postives = 935/936 (99.89%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE 120

Query: 121 ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF 180
           ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF
Sbjct: 121 ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI 240
           HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI
Sbjct: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY 300
           YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360
           VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360

Query: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS 420
           LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS
Sbjct: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS 420

Query: 421 MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF 480
           MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF
Sbjct: 421 MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF 480

Query: 481 EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR 540
           EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR
Sbjct: 481 EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR 540

Query: 541 HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRVC 600
           HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRVC
Sbjct: 541 HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRVC 600

Query: 601 SPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKYP 660
           SPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKYP
Sbjct: 601 SPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKYP 660

Query: 661 VAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSFLG 720
           VAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSFLG
Sbjct: 661 VAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSFLG 720

Query: 721 TSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDSDD 780
           TSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDSDD
Sbjct: 721 TSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDSDD 780

Query: 781 NVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNE 840
           NVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNE
Sbjct: 781 NVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNE 840

Query: 841 KAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDKDPKASKNAGAKL 900
           KAMNVGETDNPGNQSDFLQIKPFDYEAARK VVFGEDLEEDLEPENDKDPKASKNAGAKL
Sbjct: 841 KAMNVGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDLEPENDKDPKASKNAGAKL 900

Query: 901 DLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           DLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 DLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 936

[Close]

BLAST of CsGy4G010610 vs. NCBI nr
Match: XP_008442002.1 (PREDICTED: protein RRP6-like 2 [Cucumis melo] >KAA0041746.1 protein RRP6-like 2 [Cucumis melo var. makuwa])

HSP 1 Score: 1779 bits (4607), Expect = 0.0
Identity = 915/938 (97.55%), Postives = 923/938 (98.40%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE- 120
           QSQSMLETIGSSAEVW +EMA+PEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE 
Sbjct: 61  QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120

Query: 121 EESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
           EESGRA+ALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180

Query: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQP 240
           FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDG RFVHPLEK SVLDFVDKISEDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240

Query: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
           IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300

Query: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360
           YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLA 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL+
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLS 420

Query: 421 SMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL 480
           SMP E+EESD PLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL
Sbjct: 421 SMPHEAEESDPPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL 480

Query: 481 FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII 540
           FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII
Sbjct: 481 FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII 540

Query: 541 RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV 600
           RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV
Sbjct: 541 RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV 600

Query: 601 CSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKY 660
           CSPSSQSKVAPLE GYRPFVPGKCVKVDHSLHPVLNGSRHIS VGPTTSEPSKHSNGDKY
Sbjct: 601 CSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEPSKHSNGDKY 660

Query: 661 PVAHVTGVNISLQKKTNRG-LGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSF 720
           PVAHVTGVNISLQKKTNRG LGSLLGNSAPKRKLD DKKDKEESKLDKIRSSVTLPFHSF
Sbjct: 661 PVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRSSVTLPFHSF 720

Query: 721 LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDS 780
           LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKS+NVEPPAVPVPKPFPTDEIIMLEDDS
Sbjct: 721 LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTDEIIMLEDDS 780

Query: 781 DDNVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS 840
           DDNVEDED DEDEELRAVDEAT EPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS
Sbjct: 781 DDNVEDEDGDEDEELRAVDEATDEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS 840

Query: 841 NEKAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDKDPKASKNAGA 900
           NE+AMN+GETDNPGNQSDFLQIKPFDYEAARK VVFGEDLEED EPENDKDPKASKNAGA
Sbjct: 841 NEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPENDKDPKASKNAGA 900

Query: 901 KLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           KLDLGLDRVQKNS TVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 KLDLGLDRVQKNSSTVELPQGKRRHAFPATGNRSATFR 938

[Close]

BLAST of CsGy4G010610 vs. NCBI nr
Match: TYK27036.1 (protein RRP6-like 2 [Cucumis melo var. makuwa])

HSP 1 Score: 1739 bits (4503), Expect = 0.0
Identity = 904/947 (95.46%), Postives = 913/947 (96.41%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE- 120
           QSQSMLETIGSSAEVW +EMA+PEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE 
Sbjct: 61  QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120

Query: 121 EESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
           EESGRA+ALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180

Query: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQP 240
           FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDG RFVHPLEK SVLDFVDKISEDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240

Query: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
           IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300

Query: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360
           YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLA 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL+
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLS 420

Query: 421 SMPRESEESDLPLVE--VYKRSHDVCMHLYEKELLTESSYLYVYGL-------QGSGFDA 480
           SMP E+EESD PLVE   +         LYEKELLTESSYLYVYGL       QGSGFDA
Sbjct: 421 SMPHEAEESDPPLVEEITFNFVTSSSFXLYEKELLTESSYLYVYGLVFSILGLQGSGFDA 480

Query: 481 QQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIER 540
           QQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIER
Sbjct: 481 QQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIER 540

Query: 541 NLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSA 600
           NLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSA
Sbjct: 541 NLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSA 600

Query: 601 VDNTPSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEP 660
           VDNTPSDRVCSPSSQSKVAPLE GYRPFVPGKCVKVDHSLHPVLNGSRHIS VGPTTSEP
Sbjct: 601 VDNTPSDRVCSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEP 660

Query: 661 SKHSNGDKYPVAHVTGVNISLQKKTNRG-LGSLLGNSAPKRKLDIDKKDKEESKLDKIRS 720
           SKHSNGDKYPVAHVTGVNISLQKKTNRG LGSLLGNSAPKRKLD DKKDKEESKLDKIRS
Sbjct: 661 SKHSNGDKYPVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRS 720

Query: 721 SVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTD 780
           SVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKS+NVEPPAVPVPKPFPTD
Sbjct: 721 SVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTD 780

Query: 781 EIIMLEDDSDDNVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELS 840
           EIIMLEDDSDDNVEDED DEDEELRAVDEAT EPKLKGLSASSPLEIDDDDEPMSLSELS
Sbjct: 781 EIIMLEDDSDDNVEDEDGDEDEELRAVDEATDEPKLKGLSASSPLEIDDDDEPMSLSELS 840

Query: 841 SSFQKCLNSNEKAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDKD 900
           SSFQKCLNSNE+AMN+GETDNPGNQSDFLQIKPFDYEAARK VVFGEDLEED EPENDKD
Sbjct: 841 SSFQKCLNSNEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPENDKD 900

Query: 901 PKASKNAGAKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           PKASKNAGAKLDLGLDRVQKNS TVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 PKASKNAGAKLDLGLDRVQKNSSTVELPQGKRRHAFPATGNRSATFR 947

[Close]

BLAST of CsGy4G010610 vs. NCBI nr
Match: XP_038883829.1 (protein RRP6-like 2 [Benincasa hispida] >XP_038883830.1 protein RRP6-like 2 [Benincasa hispida] >XP_038883831.1 protein RRP6-like 2 [Benincasa hispida])

HSP 1 Score: 1701 bits (4405), Expect = 0.0
Identity = 876/939 (93.29%), Postives = 900/939 (95.85%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLT+GSLGSSLSKLAASSR IPAEKDFHFYYNFDEFKIPIR IER
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAASSRGIPAEKDFHFYYNFDEFKIPIRNIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE 120
           QSQSMLETIGSSAEVWGKEM FPEDTDDAYDWLVNVNDEIFERFDVSLDEFQ+ RKEEEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMTFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRTRKEEEE 120

Query: 121 ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF 180
           ESGRA+ALTADPDDGFQLVCGKKKKTP+HEDEMHDSSFESSVKVATKD+KTLGVKPKVPF
Sbjct: 121 ESGRAVALTADPDDGFQLVCGKKKKTPSHEDEMHDSSFESSVKVATKDKKTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI 240
           HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDG RFVHPLEKLSVLDFVDKI+EDFQPI
Sbjct: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPI 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY 300
           YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED+
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360
           VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360

Query: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS 420
           LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL+S
Sbjct: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLSS 420

Query: 421 MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF 480
           MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGF+AQQLAVAAGLF
Sbjct: 421 MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFNAQQLAVAAGLF 480

Query: 481 EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR 540
           EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR
Sbjct: 481 EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR 540

Query: 541 HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRVC 600
           HSMLNSCAFEEAA+RLKEVR EA SEEN SANEHQETNIPD I NMK+ A+DN+ SDR+C
Sbjct: 541 HSMLNSCAFEEAAERLKEVRIEAVSEENVSANEHQETNIPDAIPNMKDRAIDNSASDRIC 600

Query: 601 SPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKYP 660
            PSSQSKVAPLERGYRPFVPGK +KVD+ LHPVLNGSR  S VGPTTSE SKHSNGDKYP
Sbjct: 601 LPSSQSKVAPLERGYRPFVPGKSIKVDYPLHPVLNGSRQDSQVGPTTSELSKHSNGDKYP 660

Query: 661 VAHVTGVNISLQKKTNRG-LGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSFL 720
           VA VTGVNI LQKKTNRG LGSLLGNSAPKRKLD DKKDKEE+KLDKIRSSVTLPFHSFL
Sbjct: 661 VAQVTGVNILLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEENKLDKIRSSVTLPFHSFL 720

Query: 721 GTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDSD 780
           GTSEQ KSVAEPTT+ ALKT+NSELPAAESAKSSNVEPPA+PVPKPF TDEIIMLEDDSD
Sbjct: 721 GTSEQSKSVAEPTTMAALKTKNSELPAAESAKSSNVEPPAMPVPKPFLTDEIIMLEDDSD 780

Query: 781 DNVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDD--EPMSLSELSSSFQKCLN 840
           D      EDEDEEL  VDEAT EPKLKGLSASSPLEIDDDD  EPMSLSELSSSFQKCLN
Sbjct: 781 D------EDEDEELHPVDEATDEPKLKGLSASSPLEIDDDDDDEPMSLSELSSSFQKCLN 840

Query: 841 SNEKAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDKDPKASKNAG 900
           SNE+AMN+GET+NPGNQSDFLQIKPFDYEAARK VVFGEDLE+D EPENDKDPKASKNAG
Sbjct: 841 SNEQAMNLGETENPGNQSDFLQIKPFDYEAARKQVVFGEDLEDDSEPENDKDPKASKNAG 900

Query: 901 AKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           AKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 AKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 933

[Close]

BLAST of CsGy4G010610 vs. NCBI nr
Match: XP_022978083.1 (protein RRP6-like 2 [Cucurbita maxima])

HSP 1 Score: 1571 bits (4067), Expect = 0.0
Identity = 820/947 (86.59%), Postives = 868/947 (91.66%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SS+ IPA KDFHFYYNFDEFKIPIR+I+R
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPED DDAYDWLVNVNDEI ERFDVSLDEFQ+IRKEEEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120

Query: 121 ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF 180
           ESGRA+ALTAD DDGFQLVCGKKKK+P+H DE+HDS FESSVKVATKDRKTLGVKPKVPF
Sbjct: 121 ESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDS-FESSVKVATKDRKTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI 240
           HIPTIRRPQDEFNILVNN+NQPFEHVWLQRSEDG RFVHPLEKLSVLDFVDKI+EDFQP+
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY 300
           YPPSLDCTPFKFIEEVNDLK+LAAKLR  NEFAVDLEHNQYRSFQGLTCLMQISTRTED+
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKKLAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360
           VVDTLKLRIHVGPYLREVFKDPSK+KVLHGADRD+VWLQRDFGIYICNLFDTGQASRVLK
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLK 360

Query: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS 420
           LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEM+RYAREDTHYLLYIYDLMR KL+S
Sbjct: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLSS 420

Query: 421 MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF 480
           MP ESEESD+PLVEVYKRS+DVC+HLYEKELLTESSY YVYGLQGSGF+AQQL+VAA LF
Sbjct: 421 MPHESEESDIPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLSVAASLF 480

Query: 481 EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR 540
           EWRD+VARAEDESTGYILPNKTLLEIAKQMPVT+NKLRRLLKSKH +IERNLASIVTIIR
Sbjct: 481 EWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIR 540

Query: 541 HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDT------ILNMKNSAVDNT 600
           HSMLNS AFEEAA+RLKEVR EAASEEN SANEHQETN+PDT      I  +K+SAVDNT
Sbjct: 541 HSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNT 600

Query: 601 PSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHS 660
            SD++CS SSQSKVAPLE GYRPFVPGKCV VDHS HPVLNG      +GPTT E  +HS
Sbjct: 601 ASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSTHPVLNG------MGPTTLELGEHS 660

Query: 661 NGDKYPVAHVTGVNISLQKKTNRG-LGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTL 720
           NGDKYPVA VTGVNI+LQKKTNRG LGSLLGNSAPKRKLD DKKDKEE+KLDKIRSSVTL
Sbjct: 661 NGDKYPVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEENKLDKIRSSVTL 720

Query: 721 PFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIM 780
           PFHSFLGTSEQLKSV EPTT+T LKTQNSE P AES K+SN+E PA+PV KP PTDEIIM
Sbjct: 721 PFHSFLGTSEQLKSVVEPTTMTTLKTQNSEAPVAESTKTSNIELPAMPVSKPCPTDEIIM 780

Query: 781 LEDDSDDNVEDEDEDEDEELRAVDEA-TGEPKLKGLSASSPLEIDDDD---EPMSLSELS 840
           LEDDSDD+    DEDEDEEL  V EA T EPKLKG SASSPLEIDDDD   EPMSLSELS
Sbjct: 781 LEDDSDDD----DEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDNNDEPMSLSELS 840

Query: 841 SSFQKCLNSNEKAMNVGETDNPGNQSDFLQIKPFDYEAARKVV-FGEDLEEDLEPENDKD 900
           SSFQKCLNSNE+AMN+ ETD+ G QS FLQIKPFDYEAARK + FGEDLEED + E+DKD
Sbjct: 841 SSFQKCLNSNEQAMNLRETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKLEDDKD 900

Query: 901 PKASKNAGAKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           PKASK AG K DL L+RV KNS TVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 PKASKIAGLKSDLDLNRVHKNSETVELPQGKRRHAFPATGNRSATFR 936

[Close]

BLAST of CsGy4G010610 vs. ExPASy TrEMBL
Match: A0A0A0KYK9 (HRDC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G188930 PE=4 SV=1)

HSP 1 Score: 1826 bits (4731), Expect = 0.0
Identity = 935/936 (99.89%), Postives = 935/936 (99.89%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE 120

Query: 121 ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF 180
           ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF
Sbjct: 121 ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI 240
           HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI
Sbjct: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY 300
           YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360
           VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360

Query: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS 420
           LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS
Sbjct: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS 420

Query: 421 MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF 480
           MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF
Sbjct: 421 MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF 480

Query: 481 EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR 540
           EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR
Sbjct: 481 EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR 540

Query: 541 HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRVC 600
           HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRVC
Sbjct: 541 HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRVC 600

Query: 601 SPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKYP 660
           SPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKYP
Sbjct: 601 SPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKYP 660

Query: 661 VAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSFLG 720
           VAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSFLG
Sbjct: 661 VAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSFLG 720

Query: 721 TSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDSDD 780
           TSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDSDD
Sbjct: 721 TSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDSDD 780

Query: 781 NVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNE 840
           NVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNE
Sbjct: 781 NVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNE 840

Query: 841 KAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDKDPKASKNAGAKL 900
           KAMNVGETDNPGNQSDFLQIKPFDYEAARK VVFGEDLEEDLEPENDKDPKASKNAGAKL
Sbjct: 841 KAMNVGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDLEPENDKDPKASKNAGAKL 900

Query: 901 DLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           DLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 DLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 936

[Close]

BLAST of CsGy4G010610 vs. ExPASy TrEMBL
Match: A0A5A7TI59 (Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00910 PE=4 SV=1)

HSP 1 Score: 1779 bits (4607), Expect = 0.0
Identity = 915/938 (97.55%), Postives = 923/938 (98.40%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE- 120
           QSQSMLETIGSSAEVW +EMA+PEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE 
Sbjct: 61  QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120

Query: 121 EESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
           EESGRA+ALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180

Query: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQP 240
           FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDG RFVHPLEK SVLDFVDKISEDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240

Query: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
           IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300

Query: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360
           YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLA 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL+
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLS 420

Query: 421 SMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL 480
           SMP E+EESD PLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL
Sbjct: 421 SMPHEAEESDPPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL 480

Query: 481 FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII 540
           FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII
Sbjct: 481 FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII 540

Query: 541 RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV 600
           RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV
Sbjct: 541 RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV 600

Query: 601 CSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKY 660
           CSPSSQSKVAPLE GYRPFVPGKCVKVDHSLHPVLNGSRHIS VGPTTSEPSKHSNGDKY
Sbjct: 601 CSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEPSKHSNGDKY 660

Query: 661 PVAHVTGVNISLQKKTNRG-LGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSF 720
           PVAHVTGVNISLQKKTNRG LGSLLGNSAPKRKLD DKKDKEESKLDKIRSSVTLPFHSF
Sbjct: 661 PVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRSSVTLPFHSF 720

Query: 721 LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDS 780
           LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKS+NVEPPAVPVPKPFPTDEIIMLEDDS
Sbjct: 721 LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTDEIIMLEDDS 780

Query: 781 DDNVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS 840
           DDNVEDED DEDEELRAVDEAT EPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS
Sbjct: 781 DDNVEDEDGDEDEELRAVDEATDEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS 840

Query: 841 NEKAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDKDPKASKNAGA 900
           NE+AMN+GETDNPGNQSDFLQIKPFDYEAARK VVFGEDLEED EPENDKDPKASKNAGA
Sbjct: 841 NEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPENDKDPKASKNAGA 900

Query: 901 KLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           KLDLGLDRVQKNS TVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 KLDLGLDRVQKNSSTVELPQGKRRHAFPATGNRSATFR 938

[Close]

BLAST of CsGy4G010610 vs. ExPASy TrEMBL
Match: A0A1S3B475 (protein RRP6-like 2 OS=Cucumis melo OX=3656 GN=LOC103485997 PE=4 SV=1)

HSP 1 Score: 1779 bits (4607), Expect = 0.0
Identity = 915/938 (97.55%), Postives = 923/938 (98.40%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE- 120
           QSQSMLETIGSSAEVW +EMA+PEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE 
Sbjct: 61  QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120

Query: 121 EESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
           EESGRA+ALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180

Query: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQP 240
           FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDG RFVHPLEK SVLDFVDKISEDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240

Query: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
           IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300

Query: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360
           YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLA 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL+
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLS 420

Query: 421 SMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL 480
           SMP E+EESD PLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL
Sbjct: 421 SMPHEAEESDPPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGL 480

Query: 481 FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII 540
           FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII
Sbjct: 481 FEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTII 540

Query: 541 RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV 600
           RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV
Sbjct: 541 RHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDNTPSDRV 600

Query: 601 CSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHSNGDKY 660
           CSPSSQSKVAPLE GYRPFVPGKCVKVDHSLHPVLNGSRHIS VGPTTSEPSKHSNGDKY
Sbjct: 601 CSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEPSKHSNGDKY 660

Query: 661 PVAHVTGVNISLQKKTNRG-LGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTLPFHSF 720
           PVAHVTGVNISLQKKTNRG LGSLLGNSAPKRKLD DKKDKEESKLDKIRSSVTLPFHSF
Sbjct: 661 PVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRSSVTLPFHSF 720

Query: 721 LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIMLEDDS 780
           LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKS+NVEPPAVPVPKPFPTDEIIMLEDDS
Sbjct: 721 LGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTDEIIMLEDDS 780

Query: 781 DDNVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS 840
           DDNVEDED DEDEELRAVDEAT EPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS
Sbjct: 781 DDNVEDEDGDEDEELRAVDEATDEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNS 840

Query: 841 NEKAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDKDPKASKNAGA 900
           NE+AMN+GETDNPGNQSDFLQIKPFDYEAARK VVFGEDLEED EPENDKDPKASKNAGA
Sbjct: 841 NEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPENDKDPKASKNAGA 900

Query: 901 KLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           KLDLGLDRVQKNS TVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 KLDLGLDRVQKNSSTVELPQGKRRHAFPATGNRSATFR 938

[Close]

BLAST of CsGy4G010610 vs. ExPASy TrEMBL
Match: A0A5D3DTL6 (Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00180 PE=4 SV=1)

HSP 1 Score: 1739 bits (4503), Expect = 0.0
Identity = 904/947 (95.46%), Postives = 913/947 (96.41%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE- 120
           QSQSMLETIGSSAEVW +EMA+PEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEE 
Sbjct: 61  QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120

Query: 121 EESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
           EESGRA+ALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180

Query: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQP 240
           FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDG RFVHPLEK SVLDFVDKISEDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240

Query: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
           IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300

Query: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360
           YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLA 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL+
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLS 420

Query: 421 SMPRESEESDLPLVE--VYKRSHDVCMHLYEKELLTESSYLYVYGL-------QGSGFDA 480
           SMP E+EESD PLVE   +         LYEKELLTESSYLYVYGL       QGSGFDA
Sbjct: 421 SMPHEAEESDPPLVEEITFNFVTSSSFXLYEKELLTESSYLYVYGLVFSILGLQGSGFDA 480

Query: 481 QQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIER 540
           QQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIER
Sbjct: 481 QQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIER 540

Query: 541 NLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSA 600
           NLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSA
Sbjct: 541 NLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSA 600

Query: 601 VDNTPSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEP 660
           VDNTPSDRVCSPSSQSKVAPLE GYRPFVPGKCVKVDHSLHPVLNGSRHIS VGPTTSEP
Sbjct: 601 VDNTPSDRVCSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEP 660

Query: 661 SKHSNGDKYPVAHVTGVNISLQKKTNRG-LGSLLGNSAPKRKLDIDKKDKEESKLDKIRS 720
           SKHSNGDKYPVAHVTGVNISLQKKTNRG LGSLLGNSAPKRKLD DKKDKEESKLDKIRS
Sbjct: 661 SKHSNGDKYPVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRS 720

Query: 721 SVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTD 780
           SVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKS+NVEPPAVPVPKPFPTD
Sbjct: 721 SVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTD 780

Query: 781 EIIMLEDDSDDNVEDEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSELS 840
           EIIMLEDDSDDNVEDED DEDEELRAVDEAT EPKLKGLSASSPLEIDDDDEPMSLSELS
Sbjct: 781 EIIMLEDDSDDNVEDEDGDEDEELRAVDEATDEPKLKGLSASSPLEIDDDDEPMSLSELS 840

Query: 841 SSFQKCLNSNEKAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDKD 900
           SSFQKCLNSNE+AMN+GETDNPGNQSDFLQIKPFDYEAARK VVFGEDLEED EPENDKD
Sbjct: 841 SSFQKCLNSNEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPENDKD 900

Query: 901 PKASKNAGAKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           PKASKNAGAKLDLGLDRVQKNS TVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 PKASKNAGAKLDLGLDRVQKNSSTVELPQGKRRHAFPATGNRSATFR 947

[Close]

BLAST of CsGy4G010610 vs. ExPASy TrEMBL
Match: A0A6J1IRZ7 (protein RRP6-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111478169 PE=4 SV=1)

HSP 1 Score: 1571 bits (4067), Expect = 0.0
Identity = 820/947 (86.59%), Postives = 868/947 (91.66%), Query Frame = 0


Query: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
           MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SS+ IPA KDFHFYYNFDEFKIPIR+I+R
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPED DDAYDWLVNVNDEI ERFDVSLDEFQ+IRKEEEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120

Query: 121 ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF 180
           ESGRA+ALTAD DDGFQLVCGKKKK+P+H DE+HDS FESSVKVATKDRKTLGVKPKVPF
Sbjct: 121 ESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDS-FESSVKVATKDRKTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI 240
           HIPTIRRPQDEFNILVNN+NQPFEHVWLQRSEDG RFVHPLEKLSVLDFVDKI+EDFQP+
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY 300
           YPPSLDCTPFKFIEEVNDLK+LAAKLR  NEFAVDLEHNQYRSFQGLTCLMQISTRTED+
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKKLAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360
           VVDTLKLRIHVGPYLREVFKDPSK+KVLHGADRD+VWLQRDFGIYICNLFDTGQASRVLK
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLK 360

Query: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKLAS 420
           LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEM+RYAREDTHYLLYIYDLMR KL+S
Sbjct: 361 LERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLSS 420

Query: 421 MPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAGLF 480
           MP ESEESD+PLVEVYKRS+DVC+HLYEKELLTESSY YVYGLQGSGF+AQQL+VAA LF
Sbjct: 421 MPHESEESDIPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLSVAASLF 480

Query: 481 EWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTIIR 540
           EWRD+VARAEDESTGYILPNKTLLEIAKQMPVT+NKLRRLLKSKH +IERNLASIVTIIR
Sbjct: 481 EWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIR 540

Query: 541 HSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDT------ILNMKNSAVDNT 600
           HSMLNS AFEEAA+RLKEVR EAASEEN SANEHQETN+PDT      I  +K+SAVDNT
Sbjct: 541 HSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNT 600

Query: 601 PSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPSKHS 660
            SD++CS SSQSKVAPLE GYRPFVPGKCV VDHS HPVLNG      +GPTT E  +HS
Sbjct: 601 ASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSTHPVLNG------MGPTTLELGEHS 660

Query: 661 NGDKYPVAHVTGVNISLQKKTNRG-LGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSVTL 720
           NGDKYPVA VTGVNI+LQKKTNRG LGSLLGNSAPKRKLD DKKDKEE+KLDKIRSSVTL
Sbjct: 661 NGDKYPVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEENKLDKIRSSVTL 720

Query: 721 PFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTDEIIM 780
           PFHSFLGTSEQLKSV EPTT+T LKTQNSE P AES K+SN+E PA+PV KP PTDEIIM
Sbjct: 721 PFHSFLGTSEQLKSVVEPTTMTTLKTQNSEAPVAESTKTSNIELPAMPVSKPCPTDEIIM 780

Query: 781 LEDDSDDNVEDEDEDEDEELRAVDEA-TGEPKLKGLSASSPLEIDDDD---EPMSLSELS 840
           LEDDSDD+    DEDEDEEL  V EA T EPKLKG SASSPLEIDDDD   EPMSLSELS
Sbjct: 781 LEDDSDDD----DEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDNNDEPMSLSELS 840

Query: 841 SSFQKCLNSNEKAMNVGETDNPGNQSDFLQIKPFDYEAARKVV-FGEDLEEDLEPENDKD 900
           SSFQKCLNSNE+AMN+ ETD+ G QS FLQIKPFDYEAARK + FGEDLEED + E+DKD
Sbjct: 841 SSFQKCLNSNEQAMNLRETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKLEDDKD 900

Query: 901 PKASKNAGAKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 935
           PKASK AG K DL L+RV KNS TVELPQGKRRHAFPATGNRSATFR
Sbjct: 901 PKASKIAGLKSDLDLNRVHKNSETVELPQGKRRHAFPATGNRSATFR 936

[Close]

BLAST of CsGy4G010610 vs. TAIR 10
Match: AT5G35910.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 861.7 bits (2225), Expect = 5.5e-250
Identity = 499/948 (52.64%), Postives = 621/948 (65.51%), Query Frame = 0


Query: 1   MDVDQSD-SQKAQTLQSLTTG-SLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTI 60
           MDVD+S  S K ++L+ L  G S  S+LS+L++SSR IP  +DFHFYYNFDEFK PI  I
Sbjct: 6   MDVDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEI 65

Query: 61  ERQSQSMLETIGSSAEVWGKEMAFPEDTDDAY--DWLVNVNDEIFERFDVSLDEFQKIRK 120
              SQS L TIG S +VWGK M FP D DD Y  DWL NVNDE+ ERFDVS+DEFQ+IRK
Sbjct: 66  TGTSQSTLATIGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRK 125

Query: 121 EEEEESGRALALTADPDDGFQLVCGKKKK----TPTHEDEMHDSSFESSVKVATKDRKTL 180
            +E+E GR++ +  D DDGFQ+V GKKKK      T    ++       VK+A +D+ + 
Sbjct: 126 -KEKEIGRSV-VADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNSS 185

Query: 181 GVKPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDK 240
           G K KVPFH+PTI++PQ+E+NILVNN+N PFEHVWL+RSED +R +HPLEK SVLDFVDK
Sbjct: 186 G-KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVDK 245

Query: 241 ISEDFQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQ 300
              + +P+ P  L+ TPFKF++EV DLKEL AKLR V EFAVDLEHNQYRSFQGLTCLMQ
Sbjct: 246 DVNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLMQ 305

Query: 301 ISTRTEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDT 360
           ISTRTEDY+VDT KLRIH+GPYLRE+FKDP KKKV+HGADRD++WLQRDFGIY+CNLFDT
Sbjct: 306 ISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFDT 365

Query: 361 GQASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYD 420
           GQASRVL LERNSLE+LL HFCGV ANKEYQNADWR+RPLPEEM RYAREDTHYLLYIYD
Sbjct: 366 GQASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYD 425

Query: 421 LMRMKLASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQ 480
           L++++L  M ++   +D PL+EVYKRS+DVC  LYEKELLTE+SYL+VYGLQ +GF+A Q
Sbjct: 426 LIKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNAAQ 485

Query: 481 LAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNL 540
           LA+ AGL EWRD +ARAEDESTGY+LPNK LLEIAK+MP +V KLRR+LKSKHPYIERN+
Sbjct: 486 LAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIERNV 545

Query: 541 ASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENAS-ANEHQETNIPDTILNMKNSAV 600
            S+V++IR SM +  AFE AA  LK+V      ++N    +E ++ +  D          
Sbjct: 546 DSVVSVIRQSMQHYAAFESAALSLKDVSPGNVMDKNIEPISEKKDLHTGD---------- 605

Query: 601 DNTPSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHISPVGPTTSEPS 660
                  V SPS +   + LE      +          L   L GS  +S          
Sbjct: 606 -------VASPSLKENSSQLESTRDLIMGAANTNEGRGLGSGLFGSAKVSAA-------- 665

Query: 661 KHSNGDKYPVAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKEESKLDKIRSSV 720
                            + + KK + GLG+LLGN+A K+K   D+K KE+ KL++IRSSV
Sbjct: 666 -----------------VRISKKPSSGLGALLGNAASKKKSRTDEKVKEDVKLEQIRSSV 725

Query: 721 TLPFHSFLGTSEQLKSVAE--PTTVTALKTQNSELPAAESAKSSNVEPPAVPVPKPFPTD 780
            L FHSF       KS +E  P      +  +S +PA+ S +                 D
Sbjct: 726 NLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSSTMPASVSKE-----------------D 785

Query: 781 EIIMLEDDSDDNVE-DEDEDEDEELRAVDEATGEPKLKGLSASSPLEIDDDDEPMSLSEL 840
            +  L+DDS++  E         E +      G+  L  L      ++D +DEPMSLSEL
Sbjct: 786 GVKELKDDSEEASEIVGTSGRVSESKVSSSEMGDIIL--LENGDEKKVDAEDEPMSLSEL 845

Query: 841 SSSFQKCLNSNEKAMNVGETDNPGNQSDFLQIKPFDYEAARK-VVFGEDLEEDLEPENDK 900
           S++FQKC  S  K+    +      Q++FL I+PFDYEAARK V FG         E  K
Sbjct: 846 STNFQKCFKSMNKSKKAQK------QTEFLNIEPFDYEAARKEVKFG---------EGHK 869

Query: 901 DPKASKNAGAKLDLGLDRVQKNSGTVELPQGKRRHAFPATGNRSATFR 936
             +  + A A    G  + Q   G     QGKRR AFPA+GNRS +F+
Sbjct: 906 GRQGKREAAAGQKKGSTQEQSEFG-----QGKRRQAFPASGNRSMSFK 869

[Close]

BLAST of CsGy4G010610 vs. TAIR 10
Match: AT1G54440.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 598.6 bits (1542), Expect = 8.7e-171
Identity = 341/686 (49.71%), Postives = 436/686 (63.56%), Query Frame = 0


Query: 103 RFDVSLDEFQKIRKEEEEESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSV 162
           RFD  +DEF++ RK EE                                   DS     V
Sbjct: 2   RFDDPMDEFKRNRKMEE-----------------------------------DSKKVIDV 61

Query: 163 KVATKDRKTLGV-KPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPL 222
           KVA  D+      K +VPFHIPT+ +PQ+E+ ILV+N+N PFEHV L++SEDG+RF+HPL
Sbjct: 62  KVAESDKGFAKFGKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPL 121

Query: 223 EKLSVLDFVDKISEDFQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQY 282
           E+LSV+DFVD+   + +P+ P  L+ TPFK +EEV DL++LAA L+ V EFAVDLEHNQY
Sbjct: 122 EELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQY 181

Query: 283 RSFQGLTCLMQISTRTEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRD 342
           R+FQGLTCLMQISTRTEDY+VD  KL  H+GPYLRE+FKDP KKKV+HGADRD++WLQRD
Sbjct: 182 RTFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRD 241

Query: 343 FGIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAR 402
           FGIY+CNLFDTGQASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 FGIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301

Query: 403 EDTHYLLYIYDLMRMKLASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVY 462
           EDTHYLLYIYD+MRM+L +M +E E+SD PLVEVYKRS+DVCM LYEKEL T  SYL+VY
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361

Query: 463 GLQGSGFDAQQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLL 522
           G+Q    +A QL++ AGL EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ V +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421

Query: 523 KSKHPYIERNLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASAN-EHQETNIP 582
           KSK PY+ERN  +++++IR SM N+ AFE   Q LK+ R E   E N     E  +T   
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481

Query: 583 DTILNMKNSAVDNTPSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHI 642
            + L+++   VD++        SS   V PL+R     +      V+ ++ P        
Sbjct: 482 ASSLSLEKVCVDDSKKQ-----SSGFGVLPLKRK----LESDKTVVEKNIEP-------- 541

Query: 643 SPVGPTTSEPSKHSNGDKYPVAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKKDKE 702
             +  T +E S  S   K        V +   KK + G G LL     KRK + D K KE
Sbjct: 542 -KIEKTGTEASASSLSSK-------KVCVDDSKKQSSGFGVLLS----KRKFESDNKVKE 601

Query: 703 ESKLDKIRSSVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPPAV 762
           E K+ K +    +         +  +S  + T       + SE P+  S       P   
Sbjct: 602 EVKVSKSKPDKVIIVVDDDDDDDDDESYEQSTKAADALDRVSETPSKGS-------PSLT 616

Query: 763 PVPKPFPTDEIIMLEDDSDDNVEDED 787
             PK   T+ I++ +DD  ++ EDED
Sbjct: 662 QKPKTCNTEVIVLDDDDDSESREDED 616

[Close]

BLAST of CsGy4G010610 vs. TAIR 10
Match: AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 593.6 bits (1529), Expect = 2.8e-169
Identity = 341/688 (49.56%), Postives = 436/688 (63.37%), Query Frame = 0


Query: 103 RFDVSLDEFQKIRKEEEEESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSV 162
           RFD  +DEF++ RK EE                                   DS     V
Sbjct: 2   RFDDPMDEFKRNRKMEE-----------------------------------DSKKVIDV 61

Query: 163 KVATKDRKTLGV-KPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPL 222
           KVA  D+      K +VPFHIPT+ +PQ+E+ ILV+N+N PFEHV L++SEDG+RF+HPL
Sbjct: 62  KVAESDKGFAKFGKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPL 121

Query: 223 EKLSVLDFVDKISEDFQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQY 282
           E+LSV+DFVD+   + +P+ P  L+ TPFK +EEV DL++LAA L+ V EFAVDLEHNQY
Sbjct: 122 EELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQY 181

Query: 283 RSFQGLTCLMQISTRTEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRD 342
           R+FQGLTCLMQISTRTEDY+VD  KL  H+GPYLRE+FKDP KKKV+HGADRD++WLQRD
Sbjct: 182 RTFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRD 241

Query: 343 FGIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAR 402
           FGIY+CNLFDTGQASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 FGIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301

Query: 403 EDTHYLLYIYDLMRMKLASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVY 462
           EDTHYLLYIYD+MRM+L +M +E E+SD PLVEVYKRS+DVCM LYEKEL T  SYL+VY
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361

Query: 463 GLQGSGFDAQQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLL 522
           G+Q    +A QL++ AGL EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ V +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421

Query: 523 KSKHPYIERNLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASAN-EHQETNIP 582
           KSK PY+ERN  +++++IR SM N+ AFE   Q LK+ R E   E N     E  +T   
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481

Query: 583 DTILNMKNSAVDNTPSDRVCSPSSQSKVAPLERGYRPFVPGKCVKVDHSLHPVLNGSRHI 642
            + L+++   VD++        SS   V PL+R     +      V+ ++ P        
Sbjct: 482 ASSLSLEKVCVDDSKKQ-----SSGFGVLPLKRK----LESDKTVVEKNIEP-------- 541

Query: 643 SPVGPTTSEPSKHSNGDKYPVAHVTGVNISLQKKTNRGLGSLLGNSAPKRKLDIDKK--D 702
             +  T +E S  S   K        V +   KK + G G LL     KRK + D K   
Sbjct: 542 -KIEKTGTEASASSLSSK-------KVCVDDSKKQSSGFGVLLS----KRKFESDNKLQV 601

Query: 703 KEESKLDKIRSSVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSSNVEPP 762
           KEE K+ K +    +         +  +S  + T       + SE P+  S       P 
Sbjct: 602 KEEVKVSKSKPDKVIIVVDDDDDDDDDESYEQSTKAADALDRVSETPSKGS-------PS 618

Query: 763 AVPVPKPFPTDEIIMLEDDSDDNVEDED 787
               PK   T+ I++ +DD  ++ EDED
Sbjct: 662 LTQKPKTCNTEVIVLDDDDDSESREDED 618

[Close]

BLAST of CsGy4G010610 vs. TAIR 10
Match: AT2G32415.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 220.7 bits (561), Expect = 4.9e-57
Identity = 142/355 (40.00%), Postives = 194/355 (54.65%), Query Frame = 0


Query: 187 RPQDEF-NILVNNSNQPFEHV--------WLQRSEDGIRFVHPLE-KLSVLDFVDKISED 246
           +PQ  F  +L +NS   F+H+         L++  +G    HP E +++VL    +I   
Sbjct: 50  KPQFGFKRVLADNSYSEFKHLKLVDASSSSLEKPSNG----HPYETEITVLLENPQIEFG 109

Query: 247 FQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTR 306
           F            + ++E  + LKELA  L     FAVD E +  RSF G T L+QIST 
Sbjct: 110 FLRGECSLEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTH 169

Query: 307 TEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQAS 366
            ED++VDT+ L   V   LR VF DP+  KV HGAD DV+WLQRDF IY+ N+FDT +A 
Sbjct: 170 EEDFLVDTIALH-DVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKAC 229

Query: 367 RVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRM 426
            VL   + SL YLL   CGVA NK  Q  DWR RPL EEMVRYAR D HYLLYI D +  
Sbjct: 230 EVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTT 289

Query: 427 KLASMPRESEESDLP---LVEVYKRSHDVCMHLYEKEL------LTESSYLYVYGLQGSG 486
           +L  +  +S   D     L+E  +RS+  C+ LY KE          SS +Y + L G G
Sbjct: 290 ELKQLATDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRH-LNGHG 349

Query: 487 FDAQQLAVAA-----GLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKL 518
            D   +++ A      L  WRD++ R  DEST Y+L ++ ++ ++ + P T  ++
Sbjct: 350 -DKSNISLNAEELVRKLCAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEI 397

[Close]

BLAST of CsGy4G010610 vs. TAIR 10
Match: AT2G32415.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 220.7 bits (561), Expect = 4.9e-57
Identity = 142/355 (40.00%), Postives = 194/355 (54.65%), Query Frame = 0


Query: 187 RPQDEF-NILVNNSNQPFEHV--------WLQRSEDGIRFVHPLE-KLSVLDFVDKISED 246
           +PQ  F  +L +NS   F+H+         L++  +G    HP E +++VL    +I   
Sbjct: 50  KPQFGFKRVLADNSYSEFKHLKLVDASSSSLEKPSNG----HPYETEITVLLENPQIEFG 109

Query: 247 FQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTR 306
           F            + ++E  + LKELA  L     FAVD E +  RSF G T L+QIST 
Sbjct: 110 FLRGECSLEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTH 169

Query: 307 TEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQAS 366
            ED++VDT+ L   V   LR VF DP+  KV HGAD DV+WLQRDF IY+ N+FDT +A 
Sbjct: 170 EEDFLVDTIALH-DVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKAC 229

Query: 367 RVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRM 426
            VL   + SL YLL   CGVA NK  Q  DWR RPL EEMVRYAR D HYLLYI D +  
Sbjct: 230 EVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTT 289

Query: 427 KLASMPRESEESDLP---LVEVYKRSHDVCMHLYEKEL------LTESSYLYVYGLQGSG 486
           +L  +  +S   D     L+E  +RS+  C+ LY KE          SS +Y + L G G
Sbjct: 290 ELKQLATDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRH-LNGHG 349

Query: 487 FDAQQLAVAA-----GLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKL 518
            D   +++ A      L  WRD++ R  DEST Y+L ++ ++ ++ + P T  ++
Sbjct: 350 -DKSNISLNAEELVRKLCAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEI 397

The following BLAST results are available for this feature:

BLAST of CsGy4G010610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A9LLI7	7.8e-249	52.64	Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1	[more]
Q0WVE8	1.2e-169	49.71	Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1	[more]
Q01780	9.6e-82	35.04	Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2	[more]
P56960	4.8e-81	34.72	Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2	[more]
Q10146	1.5e-66	30.98	Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]

BLAST of CsGy4G010610 vs. NCBI nr


Match Name	Identity	Description
XP_004149112.1	99.89	protein RRP6-like 2 [Cucumis sativus] >KGN53919.1 hypothetical protein Csa_01914...	[more]
XP_008442002.1	97.55	PREDICTED: protein RRP6-like 2 [Cucumis melo] >KAA0041746.1 protein RRP6-like 2 ...	[more]
TYK27036.1	95.46	protein RRP6-like 2 [Cucumis melo var. makuwa]	[more]
XP_038883829.1	93.29	protein RRP6-like 2 [Benincasa hispida] >XP_038883830.1 protein RRP6-like 2 [Ben...	[more]
XP_022978083.1	86.59	protein RRP6-like 2 [Cucurbita maxima]	[more]

BLAST of CsGy4G010610 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KYK9	99.89	HRDC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G188930 PE=4 S...	[more]
A0A5A7TI59	97.55	Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G0...	[more]
A0A1S3B475	97.55	protein RRP6-like 2 OS=Cucumis melo OX=3656 GN=LOC103485997 PE=4 SV=1	[more]
A0A5D3DTL6	95.46	Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G0...	[more]
A0A6J1IRZ7	86.59	protein RRP6-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111478169 PE=4 SV=1	[more]

BLAST of CsGy4G010610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35910.1	5.5e-250	52.64	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]
AT1G54440.1	8.7e-171	49.71	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]
AT1G54440.2	2.8e-169	49.56	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]
AT2G32415.1	4.9e-57	40.00	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]
AT2G32415.2	4.9e-57	40.00	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 549..576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 876..935
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 772..796
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 640..654
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 742..830
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 635..657
None	No IPR available	PANTHER	PTHR12124:SF47	EXOSOME COMPONENT 10	coord: 9..920
None	No IPR available	CDD	cd06147	Rrp6p_like_exo	coord: 246..438 e-value: 5.31467E-112 score: 340.344
IPR002562	3'-5' exonuclease domain	SMART	SM00474	35exoneu6	coord: 250..419 e-value: 1.5E-47 score: 174.0
IPR002562	3'-5' exonuclease domain	PFAM	PF01612	DNA_pol_A_exo1	coord: 253..418 e-value: 3.8E-43 score: 147.3
IPR002121	HRDC domain	SMART	SM00341	hrdc7	coord: 469..548 e-value: 7.5E-8 score: 42.1
IPR002121	HRDC domain	PFAM	PF00570	HRDC	coord: 472..539 e-value: 2.3E-14 score: 53.1
IPR002121	HRDC domain	PROSITE	PS50967	HRDC	coord: 469..549 score: 17.052315
IPR012588	Exosome-associated factor Rrp6, N-terminal	PFAM	PF08066	PMC2NT	coord: 31..112 e-value: 1.7E-8 score: 35.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 179..457 e-value: 1.2E-87 score: 295.8
IPR044876	HRDC domain superfamily	GENE3D	1.10.150.80	HRDC domain	coord: 458..549 e-value: 6.0E-26 score: 92.2
IPR045092	Exosome complex exonuclease Rrp6-like	PANTHER	PTHR12124	POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED	coord: 9..920
IPR010997	HRDC-like superfamily	SUPERFAMILY	47819	HRDC-like	coord: 451..541
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 185..437

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G010610.2	CsGy4G010610.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0071040	nuclear polyadenylation-dependent antisense transcript catabolic process
biological_process	GO:0071039	nuclear polyadenylation-dependent CUT catabolic process
biological_process	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process
biological_process	GO:0071036	nuclear polyadenylation-dependent snoRNA catabolic process
biological_process	GO:0071037	nuclear polyadenylation-dependent snRNA catabolic process
biological_process	GO:0071038	nuclear polyadenylation-dependent tRNA catabolic process
biological_process	GO:0071051	polyadenylation-dependent snoRNA 3'-end processing
biological_process	GO:0071044	histone mRNA catabolic process
biological_process	GO:0006396	RNA processing
biological_process	GO:0006139	nucleobase-containing compound metabolic process
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003727	single-stranded RNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding