CsGy4G010010 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G010010
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Acetate kinase
Location	Gy14Chr4: 8476657 .. 8477222 (+)
RNA-Seq Expression	CsGy4G010010
Synteny	CsGy4G010010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCTTGCTTAATTACCTTCGAATGAGTAATAATTCTGTTGCAACGGTAGTCCCTAATGATCGAGAAGATTGCAAACAGATTTCAAATGTTGAGTATAATGAGTATTTGCAAGCAATGGGAAAGTTTGCAGTAGAGGAGCATACACATAACATGAGCGGAATAGAAAGAAAGTTCATCAGTGTGGGGTTTGCGGTGGTTTGTTCAGTGCCTGTGGGAGGAGATAAATATCACCTCCTAGTGAAGGTAGATGAATTTATATTGGCTCCATCATTCCCAAAGTATGAAAAGCTATATATGGCTACTGTGCTTCATAATAAAGTTAATCACTCGTGGGCACTCTTACGATTTGAAAATGTGGCACCTCCTACTGTTTACCCCCCGAGCATTGATTATCTTGATGCCTAGCTCAGTTGTCTACTTTAGATGATGATGCACATGTTGCATTTTTCTTTATCTATGTCAAATATTATATGGGAATATCTAAAATAAAGGATGCTATATATATATGCTTAATCTATCTATGTCTTATTGTTCATTTTTCCACGTGTATTATAAATAAGGTGC

mRNA sequence

AAGCCTTGCTTAATTACCTTCGAATGAGTAATAATTCTGTTGCAACGGTAGTCCCTAATGATCGAGAAGATTGCAAACAGATTTCAAATGTTGAGTATAATGAGTATTTGCAAGCAATGGGAAAGTTTGCAGTAGAGGAGCATACACATAACATGAGCGGAATAGAAAGAAAGTTCATCAGTGTGGGGTTTGCGGTGGTTTGTTCAGTGCCTGTGGGAGGAGATAAATATCACCTCCTAGTGAAGGTAGATGAATTTATATTGGCTCCATCATTCCCAAAGTATGAAAAGCTATATATGGCTACTGTGCTTCATAATAAAGTTAATCACTCGTGGGCACTCTTACGATTTGAAAATGTGGCACCTCCTACTGTTTACCCCCCGAGCATTGATTATCTTGATGCCTAGCTCAGTTGTCTACTTTAGATGATGATGCACATGTTGCATTTTTCTTTATCTATGTCAAATATTATATGGGAATATCTAAAATAAAGGATGCTATATATATATGCTTAATCTATCTATGTCTTATTGTTCATTTTTCCACGTGTATTATAAATAAGGTGC

Coding sequence (CDS)

ATGAGTAATAATTCTGTTGCAACGGTAGTCCCTAATGATCGAGAAGATTGCAAACAGATTTCAAATGTTGAGTATAATGAGTATTTGCAAGCAATGGGAAAGTTTGCAGTAGAGGAGCATACACATAACATGAGCGGAATAGAAAGAAAGTTCATCAGTGTGGGGTTTGCGGTGGTTTGTTCAGTGCCTGTGGGAGGAGATAAATATCACCTCCTAGTGAAGGTAGATGAATTTATATTGGCTCCATCATTCCCAAAGTATGAAAAGCTATATATGGCTACTGTGCTTCATAATAAAGTTAATCACTCGTGGGCACTCTTACGATTTGAAAATGTGGCACCTCCTACTGTTTACCCCCCGAGCATTGATTATCTTGATGCCTAG

Protein sequence

MSNNSVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYPPSIDYLDA*

Homology

[Close]

BLAST of CsGy4G010010 vs. NCBI nr
Match: KGN53820.1 (hypothetical protein Csa_014847 [Cucumis sativus])

HSP 1 Score: 263 bits (672), Expect = 1.05e-88
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MSNNSVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVC 60
           MSNNSVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVC
Sbjct: 1   MSNNSVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVC 60

Query: 61  SVPVGGDKYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYPP 120
           SVPVGGDKYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYPP
Sbjct: 61  SVPVGGDKYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYPP 120

Query: 121 SIDYLDA 127
           SIDYLDA
Sbjct: 121 SIDYLDA 127

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BLAST of CsGy4G010010 vs. NCBI nr
Match: KAE8649343.1 (hypothetical protein Csa_014384 [Cucumis sativus])

HSP 1 Score: 191 bits (484), Expect = 4.89e-60
Identity = 92/119 (77.31%), Postives = 104/119 (87.39%), Query Frame = 0


Query: 6   VATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVG 65
           V  VVPN++EDCKQISNVEYN YLQAMG+FAVEE+TH   GI+RKFISVGFAVVCSV VG
Sbjct: 5   VEMVVPNNQEDCKQISNVEYNSYLQAMGRFAVEEYTHYNKGIKRKFISVGFAVVCSVSVG 64

Query: 66  GDKYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYPPSIDY 124
            +KYHLLVKVDEFILAPS PK+EK+Y+ATVLH KVNHSWALLRFE+ A  TV P +I+Y
Sbjct: 65  EEKYHLLVKVDEFILAPSVPKFEKVYVATVLHKKVNHSWALLRFEDAAASTVSPTNIEY 123

[Close]

BLAST of CsGy4G010010 vs. NCBI nr
Match: KAG6590492.1 (hypothetical protein SDJN03_15915, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.7 bits (169), Expect = 2.44e-12
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 28  YLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFPKY 87
           Y+  MG+FAV EH HN+ G E KF+SV       VP  G  Y L+++VD  I+ PS+P  
Sbjct: 33  YVHEMGRFAVMEHAHNLLGAEWKFVSVLSCKTQVVP-KGKLYCLVIEVDIAIVIPSYPHS 92

Query: 88  EKLYMATVLHNKVNHSWALLRFENVAP 114
            +LY A VL  +   SW L+ F+ + P
Sbjct: 93  IELYEAIVLDKQCERSWELISFDPIKP 118

[Close]

BLAST of CsGy4G010010 vs. NCBI nr
Match: XP_022132557.1 (cysteine proteinase inhibitor 6-like [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 9.91e-12
Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 28  YLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFPKY 87
           Y+Q +G+FAV EHTHN+ G   +FI V      S  VGG KY L+++V E I+ PS P  
Sbjct: 35  YVQELGRFAVMEHTHNLCGASYEFIRVVSGE--SQVVGGKKYCLVIEVKETIIIPSMPSS 94

Query: 88  EKLYMATVLHNKVNHSWALLRFENVAP 114
            K + A +L      SWALL F    P
Sbjct: 95  IKFFKAIMLDKAWEKSWALLSFVPCEP 119

[Close]

BLAST of CsGy4G010010 vs. NCBI nr
Match: KAG6590493.1 (hypothetical protein SDJN03_15916, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.7 bits (156), Expect = 2.14e-10
Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 28  YLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFPKY 87
           Y+Q MG+FAV EH H + G +  F+ V       VP  G  Y LL+KVD  I+ P  P  
Sbjct: 33  YVQEMGRFAVMEHVHGLVGAKWSFVGVVSCESLVVP-KGKLYRLLIKVDIEIVVPCHPHA 92

Query: 88  EKLYMATVLHNKVNHSWALLRFENVAP 114
            ++Y A VL  +   SW L+ F+ V P
Sbjct: 93  IEVYEAIVLDKECERSWELMSFKRVLP 118

[Close]

BLAST of CsGy4G010010 vs. ExPASy TrEMBL
Match: A0A0A0KW14 (Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1)

HSP 1 Score: 263 bits (672), Expect = 5.09e-89
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MSNNSVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVC 60
           MSNNSVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVC
Sbjct: 1   MSNNSVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVC 60

Query: 61  SVPVGGDKYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYPP 120
           SVPVGGDKYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYPP
Sbjct: 61  SVPVGGDKYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYPP 120

Query: 121 SIDYLDA 127
           SIDYLDA
Sbjct: 121 SIDYLDA 127

[Close]

BLAST of CsGy4G010010 vs. ExPASy TrEMBL
Match: A0A6J1BU61 (cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005388 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.80e-12
Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 28  YLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFPKY 87
           Y+Q +G+FAV EHTHN+ G   +FI V      S  VGG KY L+++V E I+ PS P  
Sbjct: 35  YVQELGRFAVMEHTHNLCGASYEFIRVVSGE--SQVVGGKKYCLVIEVKETIIIPSMPSS 94

Query: 88  EKLYMATVLHNKVNHSWALLRFENVAP 114
            K + A +L      SWALL F    P
Sbjct: 95  IKFFKAIMLDKAWEKSWALLSFVPCEP 119

[Close]

BLAST of CsGy4G010010 vs. ExPASy TrEMBL
Match: A0A6J1GCT2 (uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC111453027 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.73e-09
Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 25  YNEYLQAMGKFAVEEHTHNMSGIERKFISVGFA---VVCSVPVGGDKYHLLVKVDEFILA 84
           +++Y+Q +G+FAV EH H + G+   FI V      +VC     G KY L+V+V E  + 
Sbjct: 29  HDQYVQELGRFAVMEHVHGLCGVGMTFICVVSGESKMVCE----GKKYSLVVEVKEVPVL 88

Query: 85  PSFPKYEKLYMATVLHNKVNHSWALLRFENVAPPTVYP 119
           P      KLY+A VL  +   SW LL F+    P + P
Sbjct: 89  PHACPAIKLYVADVLDKQCAKSWELLAFKPFCLPPMGP 122

The following BLAST results are available for this feature:

BLAST of CsGy4G010010 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G010010 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53820.1	1.05e-88	100.00	hypothetical protein Csa_014847 [Cucumis sativus]	[more]
KAE8649343.1	4.89e-60	77.31	hypothetical protein Csa_014384 [Cucumis sativus]	[more]
KAG6590492.1	2.44e-12	42.53	hypothetical protein SDJN03_15915, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022132557.1	9.91e-12	43.68	cysteine proteinase inhibitor 6-like [Momordica charantia]	[more]
KAG6590493.1	2.14e-10	40.23	hypothetical protein SDJN03_15916, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsGy4G010010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW14	5.09e-89	100.00	Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1	[more]
A0A6J1BU61	4.80e-12	43.68	cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GCT2	7.73e-09	36.73	uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC1114530...	[more]

BLAST of CsGy4G010010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.10		coord: 15..112 e-value: 1.3E-7 score: 33.7
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 20..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G010010.2	CsGy4G010010.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity