CsGy4G008420 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G008420
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RHOMBOID-like protein 9, chloroplastic
Location	Gy14Chr4: 6423252 .. 6425768 (-)
RNA-Seq Expression	CsGy4G008420
Synteny	CsGy4G008420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAATTAGTGGAAGCCTTCTCAACTCCAAAAGCCTAACTGACCCTCTAAATATATATTCCTCCCTTTTCTTCATTAGCTCAAATATACACTCAAAGGTTCAAATGATGGCTGTTGTTCCCACTTTTTTCCAAATAAGAAACTTTAACGAAACGATTTCCAAGCCTAATAAGAGAGTATGTGTTTGCAAATGGGATGTGGTGGTTTCAAAGGATAATCTACCAACTTTCGTCTCCTACTCCAAACATCATACTTGGGAAATACATGATAACGATTCGCCTGTCGTTACGATCTCGACGAGAGCGAGGAAGTCGAGAAGAGGGTTGAAAGCATTATTGCACCATGTGAGATGCAGTAATGGTTTGGATTTTGAGCACTCAAAAGTATCAGAAAAGTTAAGTCAGGTTTGGGAGTGTAGTACTAATGAGAAGCAATTGAGATCACTGGGTTCTTATTTTGGAAGGCTTCAAGGTGTTGGGGATAGGAAAAATTTAGATTCTTTAAAGAAGATGAAAGTTCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAATTGCTTGATGCTTATTTTCAAAAAGTTGATAAAGGTAAACTCGTTTTTATCCAAATTCATCTATATGTTATTGTTCTATTTTTCATGATTTATCTGTCTAAGCAACTAGATACTATTGTTTCATTGTCATTAAATTCAAAAGTTTAAGCAGATAAAATATCGCAAGTTTAGATATCTATATATTATTATCATGAATTCATTTTGTTTCTATTAGTTATAAAAAGTAAATCCTCTTTCGGCATAGTTCATACTTGATGCAAGTTGAGACACCAACTTTAATTGTTTTTTTTTTTCTTTTTTTAAATGCAAATGTCAGTTATAAAAACTAGTTAAAAGTTCATAATAATTCAAGAGAAAAAGAAAAATAGAACCAACATAGAAACCTTTAAAGCATTTAATATCTTAGCAATTTGTAGCCATGTCAGAATTTGATATCTATAGCAGATACAGGTTTGCACAAACATCCTCTGTCTAGTTTTGATGAACAAGAAGAAGGCAAATTGGTGTTCACAACATCCCCTTCCGAAGATCACGTTAAAGATGACGAATTGCAAATACGACATGTGAAATTGAGTGGTATGATTCACAAAAGCATGCCAAACAAAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATGTAAGGTTCATTATTACGATTCATTTAACGAAAAACCAATGATTTTCTTTAAGAAAAATACGTTTCATAAGTCATCCCAAACTCATATTTAGTAACGTTTGATGCAGAATATATGTTCTAATAGGTTGATTTTTGGAAATATATATATGCAGAAGTGCTTTGGTATCTATAAATATAGCAGTTTTCTTATTTGAAGTAGCCAGTCCAGTGAAAAACTCAGAACTACAACTCTTTTCACTTCCTTCTCTATATGGAGCAAAGATCAATGAGCTGATTCTAGTAGGAGAATGGTGGAGGCTTGTTACACCTATGTTTCTGGTACAACATTGATATAACTCGGTTCGTGTTTCCATTCTATAACTGTTTTCGACATTTTATTCCTTTGTCTTTAGAAAACCGTCGATTTAAACATAGTTTAAGTGTTTTCTCGATCTGGGCATTGAAATAATTCCTTTTGAATGTACTAAAAAAGTGCCTTGCCTATATTAACCTCTTTATAAATGCAGCATTCAGGGGTTCTTCACGTTGCTCTCAGTTGTTGGACACTTCTTACATTTGGCCGCCAAGTTTGTAGATAATATGGTCCCTTTACATTTTTCTTGATCTATGTCTTAGGAGGAGTTTCTGGTAATCTCACCAGCTTTCTTCATACTCCCGATCCAACTGTGGGGGGGACGGTAAGCTAGCTCAAAAACACTTACGAGACAAAACCATGTATATTTTTTGAGATGGTTATTGTTTAATGTAAACTATATATTGCACCCTTTGAGCAGGGGCCAGTGTTTGCAATGATTGGAGCTTGGCTTAGTTACCAATTCCAGAACAAAGATGTTATGACAAAGGATGTTTCAGACAAGATGTTTTTGAAAGCATTAGTTGCAGCTGTCATAAGTTCCATCTTAAGCAATATCGGTCCCATTGATGAATGGTAAGTTAAGAAAATCTCTCATTTAGCAAAGAGTGGAATAGTTTAAAGCATAAAAATGAAACAATGATGATGATGATGATGATATAGAAATGTTTGGTTAATTTGGTGGTGTGTTGTAATTAATTGTAGGACTCACACAGGAGCAGCTTTTAGTGGAATGTTATATGGGTTTCTAACATCCCCAATTGTGGAGGTCAATGATGCTTCTTCTTCTTCTTCTTCAAGAAGAGGCCAAGAAAAGGGAATAAAGCTCGTTAGGAAATATGCTAATCCTTGCAGATCATTGGCTTTTTTTGTTCTTTTCATAATGGGATTCATAAGTTTGGTTTTCTTTATTCAACCTCCCTTCCACCACTTTGGACTTTTGAGTGTTCTTCAACTTTAA

mRNA sequence

ATGCAAATTAGTGGAAGCCTTCTCAACTCCAAAAGCCTAACTGACCCTCTAAATATATATTCCTCCCTTTTCTTCATTAGCTCAAATATACACTCAAAGGTTCAAATGATGGCTGTTGTTCCCACTTTTTTCCAAATAAGAAACTTTAACGAAACGATTTCCAAGCCTAATAAGAGAGTATGTGTTTGCAAATGGGATGTGGTGGTTTCAAAGGATAATCTACCAACTTTCGTCTCCTACTCCAAACATCATACTTGGGAAATACATGATAACGATTCGCCTGTCGTTACGATCTCGACGAGAGCGAGGAAGTCGAGAAGAGGGTTGAAAGCATTATTGCACCATGTGAGATGCAGTAATGGTTTGGATTTTGAGCACTCAAAAGTATCAGAAAAGTTAAGTCAGGTTTGGGAGTGTAGTACTAATGAGAAGCAATTGAGATCACTGGGTTCTTATTTTGGAAGGCTTCAAGGTGTTGGGGATAGGAAAAATTTAGATTCTTTAAAGAAGATGAAAGTTCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAATTGCTTGATGCTTATTTTCAAAAAGTTGATAAAGATACAGGTTTGCACAAACATCCTCTGTCTAGTTTTGATGAACAAGAAGAAGGCAAATTGGTGTTCACAACATCCCCTTCCGAAGATCACGTTAAAGATGACGAATTGCAAATACGACATGTGAAATTGAGTGGTATGATTCACAAAAGCATGCCAAACAAAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATAAGTGCTTTGGTATCTATAAATATAGCAGTTTTCTTATTTGAAGTAGCCAGTCCAGTGAAAAACTCAGAACTACAACTCTTTTCACTTCCTTCTCTATATGGAGCAAAGATCAATGAGCTGATTCTAGTAGGAGAATGGTGGAGGCTTGTTACACCTATGGGTTCTTCACGTTGCTCTCAGTTGTTGGACACTTCTTACATTTGGCCGCCAAGAGGAGTTTCTGGTAATCTCACCAGCTTTCTTCATACTCCCGATCCAACTGTGGGGGGGACGGGGCCAGTGTTTGCAATGATTGGAGCTTGGCTTAGTTACCAATTCCAGAACAAAGATGTTATGACAAAGGATGTTTCAGACAAGATGTTTTTGAAAGCATTAGTTGCAGCTGTCATAAGTTCCATCTTAAGCAATATCGGTCCCATTGATGAATGGACTCACACAGGAGCAGCTTTTAGTGGAATGTTATATGGGTTTCTAACATCCCCAATTGTGGAGGTCAATGATGCTTCTTCTTCTTCTTCTTCAAGAAGAGGCCAAGAAAAGGGAATAAAGCTCGTTAGGAAATATGCTAATCCTTGCAGATCATTGGCTTTTTTTGTTCTTTTCATAATGGGATTCATAAGTTTGGTTTTCTTTATTCAACCTCCCTTCCACCACTTTGGACTTTTGAGTGTTCTTCAACTTTAA

Coding sequence (CDS)

ATGCAAATTAGTGGAAGCCTTCTCAACTCCAAAAGCCTAACTGACCCTCTAAATATATATTCCTCCCTTTTCTTCATTAGCTCAAATATACACTCAAAGGTTCAAATGATGGCTGTTGTTCCCACTTTTTTCCAAATAAGAAACTTTAACGAAACGATTTCCAAGCCTAATAAGAGAGTATGTGTTTGCAAATGGGATGTGGTGGTTTCAAAGGATAATCTACCAACTTTCGTCTCCTACTCCAAACATCATACTTGGGAAATACATGATAACGATTCGCCTGTCGTTACGATCTCGACGAGAGCGAGGAAGTCGAGAAGAGGGTTGAAAGCATTATTGCACCATGTGAGATGCAGTAATGGTTTGGATTTTGAGCACTCAAAAGTATCAGAAAAGTTAAGTCAGGTTTGGGAGTGTAGTACTAATGAGAAGCAATTGAGATCACTGGGTTCTTATTTTGGAAGGCTTCAAGGTGTTGGGGATAGGAAAAATTTAGATTCTTTAAAGAAGATGAAAGTTCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAATTGCTTGATGCTTATTTTCAAAAAGTTGATAAAGATACAGGTTTGCACAAACATCCTCTGTCTAGTTTTGATGAACAAGAAGAAGGCAAATTGGTGTTCACAACATCCCCTTCCGAAGATCACGTTAAAGATGACGAATTGCAAATACGACATGTGAAATTGAGTGGTATGATTCACAAAAGCATGCCAAACAAAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATAAGTGCTTTGGTATCTATAAATATAGCAGTTTTCTTATTTGAAGTAGCCAGTCCAGTGAAAAACTCAGAACTACAACTCTTTTCACTTCCTTCTCTATATGGAGCAAAGATCAATGAGCTGATTCTAGTAGGAGAATGGTGGAGGCTTGTTACACCTATGGGTTCTTCACGTTGCTCTCAGTTGTTGGACACTTCTTACATTTGGCCGCCAAGAGGAGTTTCTGGTAATCTCACCAGCTTTCTTCATACTCCCGATCCAACTGTGGGGGGGACGGGGCCAGTGTTTGCAATGATTGGAGCTTGGCTTAGTTACCAATTCCAGAACAAAGATGTTATGACAAAGGATGTTTCAGACAAGATGTTTTTGAAAGCATTAGTTGCAGCTGTCATAAGTTCCATCTTAAGCAATATCGGTCCCATTGATGAATGGACTCACACAGGAGCAGCTTTTAGTGGAATGTTATATGGGTTTCTAACATCCCCAATTGTGGAGGTCAATGATGCTTCTTCTTCTTCTTCTTCAAGAAGAGGCCAAGAAAAGGGAATAAAGCTCGTTAGGAAATATGCTAATCCTTGCAGATCATTGGCTTTTTTTGTTCTTTTCATAATGGGATTCATAAGTTTGGTTTTCTTTATTCAACCTCCCTTCCACCACTTTGGACTTTTGAGTGTTCTTCAACTTTAA

Protein sequence

MQISGSLLNSKSLTDPLNIYSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSPVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQEEGKLVFTTSPSEDHVKDDELQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMGSSRCSQLLDTSYIWPPRGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL*

Homology

[Close]

BLAST of CsGy4G008420 vs. ExPASy Swiss-Prot
Match: Q9FFX0 (RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.0e-51
Identity = 129/369 (34.96%), Postives = 194/369 (52.57%), Query Frame = 0


Query: 138 ECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK 197
           E    +++L+ L SYFG+LQ   ++ ++ +   +      +    +EL  L AY  K+ K
Sbjct: 72  ENKITKQRLKLLDSYFGKLQNDDEKPSISTGDDID--RKAELNVNEELDSLSAYLDKLQK 131

Query: 198 DTGLHKHPLSSFDEQEEGKLVFTTSPSEDHVKDDELQI-RHVKLSGMIHKSMPNK---TQ 257
           D                 K     S + D VK +   +   ++ +G+ + + P +    +
Sbjct: 132 D----------------AKSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNSPFQQFDDE 191

Query: 258 LQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWR 317
            Q E+  + Y +S L SIN+ V LFE A+PV+N+ + L SLP LYGAKIN+LIL GEWWR
Sbjct: 192 DQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDLILAGEWWR 251

Query: 318 LVTPM-------------------GSSRCSQ--LLDTSYIWPPRGVSGNLTSFLHTPDPT 377
           LVTPM                   G   C    L     I+   GVSGN  SFLHT DPT
Sbjct: 252 LVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMSFLHTADPT 311

Query: 378 VGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTG 437
           VGGTGP FA+IGAWL  Q QNK+++  +  + +F KA++      ILS+ GPID+WT+ G
Sbjct: 312 VGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGPIDDWTNLG 371

Query: 438 AAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLV----RKYANPCRSLAFFVLFIM 478
           A  +G++YGF T P++++    S       +++GI  V    +  A+PC+S   F +F+ 
Sbjct: 372 ALIAGIVYGFFTCPVLQLGSGGSE------RQEGIVTVGPEKQNSADPCKSFLLFTIFVA 416

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BLAST of CsGy4G008420 vs. ExPASy Swiss-Prot
Match: P54493 (Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 8.8e-10
Identity = 62/229 (27.07%), Postives = 95/229 (41.48%), Query Frame = 0


Query: 220 TTSPSEDHVKDDELQI-RHVKLSGMIHKSMPNKTQ---LQEEEVCDLYLISALVSINIAV 279
           T   SE+H   +  Q+ R   LS ++ +    KT+    Q  +    YL  AL    +  
Sbjct: 134 TEDCSEEHASFENAQMARERFLSLVLKQEEQRKTEAAVFQNGKPTFTYLFIALQI--LMF 193

Query: 280 FLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTP--MGSSRCSQLLDTSYIW 339
           FL E+     N+E  +      +GAK N LI  GEWWRL+TP  +         +T  +W
Sbjct: 194 FLLEINGGSTNTETLV-----AFGAKENSLIAQGEWWRLLTPIVLHIGIAHLAFNTLALW 253

Query: 340 P-------------------PRGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNK 399
                                 G++G++ SF+ +P P+ G +G +F  +GA L     N+
Sbjct: 254 SVGTAVERMYGSGRFLLIYLAAGITGSIASFVFSPYPSAGASGAIFGCLGALLYVALSNR 313

Query: 400 DVMTKDVSDKMFLKALVAAVISSILSNIG------PIDEWTHTGAAFSG 418
                    KMFL+ +   +I  I+ N+G       ID   H G    G
Sbjct: 314 ---------KMFLRTIGTNIIVIIIINLGFGFAVSNIDNSGHIGGLIGG 346

[Close]

BLAST of CsGy4G008420 vs. NCBI nr
Match: XP_004137292.3 (RHOMBOID-like protein 9, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 916 bits (2368), Expect = 0.0
Identity = 474/513 (92.40%), Postives = 478/513 (93.18%), Query Frame = 0


Query: 1   MQISGSLLNSKSLTDPLNIYSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV 60
           MQISGSLLNSKSLTDPLNI SSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV
Sbjct: 1   MQISGSLLNSKSLTDPLNICSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV 60

Query: 61  CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSPVVTISTRARKSRRGLKALLHHVRCSN 120
           CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS VVTISTRARKSRRGLKALLHHVRCSN
Sbjct: 61  CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSSVVTISTRARKSRRGLKALLHHVRCSN 120

Query: 121 GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK 180
           GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK
Sbjct: 121 GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK 180

Query: 181 AKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQEEGKLVFTTSPSEDHVKDDELQIRHVKL 240
           AKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQEEGKLVFTTSPSED VKDDELQIRHVKL
Sbjct: 181 AKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQEEGKLVFTTSPSEDRVKDDELQIRHVKL 240

Query: 241 SGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGA 300
           SGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGA
Sbjct: 241 SGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGA 300

Query: 301 KINELILVGEWWRLVTPM-------------------GSSRCSQLLDTSY--IWPPRGVS 360
           KINELILVGEWWRLVTPM                   G   C +    ++  I+   GVS
Sbjct: 301 KINELILVGEWWRLVTPMFLHSGVLHVALSCWTLLTFGRQVCREYGPFTFFLIYVLGGVS 360

Query: 361 GNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSIL 420
           GNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSIL
Sbjct: 361 GNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSIL 420

Query: 421 SNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRS 480
           SNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRS
Sbjct: 421 SNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRS 480

Query: 481 LAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 492
           LAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL
Sbjct: 481 LAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 513

[Close]

BLAST of CsGy4G008420 vs. NCBI nr
Match: XP_011653344.2 (RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 912 bits (2356), Expect = 0.0
Identity = 474/514 (92.22%), Postives = 478/514 (93.00%), Query Frame = 0


Query: 1   MQISGSLLNSKSLTDPLNIYSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV 60
           MQISGSLLNSKSLTDPLNI SSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV
Sbjct: 1   MQISGSLLNSKSLTDPLNICSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV 60

Query: 61  CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSPVVTISTRARKSRRGLKALLHHVRCSN 120
           CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS VVTISTRARKSRRGLKALLHHVRCSN
Sbjct: 61  CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSSVVTISTRARKSRRGLKALLHHVRCSN 120

Query: 121 GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK 180
           GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK
Sbjct: 121 GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK 180

Query: 181 AKKELQLLDAYFQKVDK-DTGLHKHPLSSFDEQEEGKLVFTTSPSEDHVKDDELQIRHVK 240
           AKKELQLLDAYFQKVDK DTGLHKHPLSSFDEQEEGKLVFTTSPSED VKDDELQIRHVK
Sbjct: 181 AKKELQLLDAYFQKVDKADTGLHKHPLSSFDEQEEGKLVFTTSPSEDRVKDDELQIRHVK 240

Query: 241 LSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYG 300
           LSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYG
Sbjct: 241 LSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYG 300

Query: 301 AKINELILVGEWWRLVTPM-------------------GSSRCSQLLDTSY--IWPPRGV 360
           AKINELILVGEWWRLVTPM                   G   C +    ++  I+   GV
Sbjct: 301 AKINELILVGEWWRLVTPMFLHSGVLHVALSCWTLLTFGRQVCREYGPFTFFLIYVLGGV 360

Query: 361 SGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSI 420
           SGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSI
Sbjct: 361 SGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSI 420

Query: 421 LSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCR 480
           LSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCR
Sbjct: 421 LSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCR 480

Query: 481 SLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 492
           SLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL
Sbjct: 481 SLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 514

[Close]

BLAST of CsGy4G008420 vs. NCBI nr
Match: XP_011653345.2 (RHOMBOID-like protein 9, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 907 bits (2343), Expect = 0.0
Identity = 472/513 (92.01%), Postives = 476/513 (92.79%), Query Frame = 0


Query: 1   MQISGSLLNSKSLTDPLNIYSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV 60
           MQISGSLLNSKSLTDPLNI SSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV
Sbjct: 1   MQISGSLLNSKSLTDPLNICSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV 60

Query: 61  CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSPVVTISTRARKSRRGLKALLHHVRCSN 120
           CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS VVTISTRARKSRRGLKALLHHVRCSN
Sbjct: 61  CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSSVVTISTRARKSRRGLKALLHHVRCSN 120

Query: 121 GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK 180
           GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK
Sbjct: 121 GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK 180

Query: 181 AKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQEEGKLVFTTSPSEDHVKDDELQIRHVKL 240
           AKKELQLLDAYFQKVDK  GLHKHPLSSFDEQEEGKLVFTTSPSED VKDDELQIRHVKL
Sbjct: 181 AKKELQLLDAYFQKVDK--GLHKHPLSSFDEQEEGKLVFTTSPSEDRVKDDELQIRHVKL 240

Query: 241 SGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGA 300
           SGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGA
Sbjct: 241 SGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGA 300

Query: 301 KINELILVGEWWRLVTPM-------------------GSSRCSQLLDTSY--IWPPRGVS 360
           KINELILVGEWWRLVTPM                   G   C +    ++  I+   GVS
Sbjct: 301 KINELILVGEWWRLVTPMFLHSGVLHVALSCWTLLTFGRQVCREYGPFTFFLIYVLGGVS 360

Query: 361 GNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSIL 420
           GNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSIL
Sbjct: 361 GNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSIL 420

Query: 421 SNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRS 480
           SNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRS
Sbjct: 421 SNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRS 480

Query: 481 LAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 492
           LAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL
Sbjct: 481 LAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 511

[Close]

BLAST of CsGy4G008420 vs. NCBI nr
Match: XP_031740072.1 (RHOMBOID-like protein 9, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 905 bits (2340), Expect = 0.0
Identity = 473/514 (92.02%), Postives = 477/514 (92.80%), Query Frame = 0


Query: 1   MQISGSLLNSKSLTDPLNIYSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV 60
           MQISGSLLNSKSLTDPLNI SSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV
Sbjct: 1   MQISGSLLNSKSLTDPLNICSSLFFISSNIHSKVQMMAVVPTFFQIRNFNETISKPNKRV 60

Query: 61  CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSPVVTISTRARKSRRGLKALLHHVRCSN 120
           CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS VVTISTRARKSRRGLKALLHHVRCSN
Sbjct: 61  CVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSSVVTISTRARKSRRGLKALLHHVRCSN 120

Query: 121 GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK 180
           GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK
Sbjct: 121 GLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFK 180

Query: 181 AKKELQLLDAYFQKVDK-DTGLHKHPLSSFDEQEEGKLVFTTSPSEDHVKDDELQIRHVK 240
           AKKELQLLDAYFQKVDK DTGLHKHPLSSFDEQEEGKLVFTTSPSED VKDDELQIRHVK
Sbjct: 181 AKKELQLLDAYFQKVDKADTGLHKHPLSSFDEQEEGKLVFTTSPSEDRVKDDELQIRHVK 240

Query: 241 LSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYG 300
           LSGMIHKSMPNKTQLQEEEVCDLYLI ALVSINIAVFLFEVASPVKNSELQLFSLPSLYG
Sbjct: 241 LSGMIHKSMPNKTQLQEEEVCDLYLI-ALVSINIAVFLFEVASPVKNSELQLFSLPSLYG 300

Query: 301 AKINELILVGEWWRLVTPM-------------------GSSRCSQLLDTSY--IWPPRGV 360
           AKINELILVGEWWRLVTPM                   G   C +    ++  I+   GV
Sbjct: 301 AKINELILVGEWWRLVTPMFLHSGVLHVALSCWTLLTFGRQVCREYGPFTFFLIYVLGGV 360

Query: 361 SGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSI 420
           SGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSI
Sbjct: 361 SGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSI 420

Query: 421 LSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCR 480
           LSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCR
Sbjct: 421 LSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCR 480

Query: 481 SLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 492
           SLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL
Sbjct: 481 SLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 513

[Close]

BLAST of CsGy4G008420 vs. NCBI nr
Match: KAE8649279.1 (hypothetical protein Csa_015345 [Cucumis sativus])

HSP 1 Score: 847 bits (2187), Expect = 1.09e-307
Identity = 438/478 (91.63%), Postives = 442/478 (92.47%), Query Frame = 0


Query: 36  MMAVVPTFFQIRNFNETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSPV 95
           MMAVVPTFFQIRNFNETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS V
Sbjct: 1   MMAVVPTFFQIRNFNETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSSV 60

Query: 96  VTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGR 155
           VTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGR
Sbjct: 61  VTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGR 120

Query: 156 LQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQEEG 215
           LQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK  GLHKHPLSSFDEQEEG
Sbjct: 121 LQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK--GLHKHPLSSFDEQEEG 180

Query: 216 KLVFTTSPSEDHVKDDELQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAV 275
           KLVFTTSPSED VKDDELQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAV
Sbjct: 181 KLVFTTSPSEDRVKDDELQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAV 240

Query: 276 FLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM----------------- 335
           FLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM                 
Sbjct: 241 FLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCWTLL 300

Query: 336 --GSSRCSQLLDTSY--IWPPRGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNK 395
             G   C +    ++  I+   GVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNK
Sbjct: 301 TFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNK 360

Query: 396 DVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDAS 455
           DVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDAS
Sbjct: 361 DVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDAS 420

Query: 456 SSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 492
           SSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL
Sbjct: 421 SSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 476

[Close]

BLAST of CsGy4G008420 vs. ExPASy TrEMBL
Match: A0A0A0L0I7 (Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G094530 PE=3 SV=1)

HSP 1 Score: 845 bits (2182), Expect = 2.94e-307
Identity = 437/477 (91.61%), Postives = 441/477 (92.45%), Query Frame = 0


Query: 37  MAVVPTFFQIRNFNETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSPVV 96
           MAVVPTFFQIRNFNETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS VV
Sbjct: 1   MAVVPTFFQIRNFNETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSSVV 60

Query: 97  TISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRL 156
           TISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRL
Sbjct: 61  TISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGRL 120

Query: 157 QGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQEEGK 216
           QGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK  GLHKHPLSSFDEQEEGK
Sbjct: 121 QGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK--GLHKHPLSSFDEQEEGK 180

Query: 217 LVFTTSPSEDHVKDDELQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVF 276
           LVFTTSPSED VKDDELQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVF
Sbjct: 181 LVFTTSPSEDRVKDDELQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSINIAVF 240

Query: 277 LFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM------------------ 336
           LFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM                  
Sbjct: 241 LFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCWTLLT 300

Query: 337 -GSSRCSQLLDTSY--IWPPRGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKD 396
            G   C +    ++  I+   GVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKD
Sbjct: 301 FGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQNKD 360

Query: 397 VMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASS 456
           VMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASS
Sbjct: 361 VMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVNDASS 420

Query: 457 SSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 492
           SSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL
Sbjct: 421 SSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQL 475

[Close]

BLAST of CsGy4G008420 vs. ExPASy TrEMBL
Match: A0A1S3C0U5 (RHOMBOID-like protein 9, chloroplastic isoform X5 OS=Cucumis melo OX=3656 GN=LOC103495725 PE=3 SV=1)

HSP 1 Score: 757 bits (1955), Expect = 1.35e-272
Identity = 393/481 (81.70%), Postives = 423/481 (87.94%), Query Frame = 0


Query: 40  VPTFFQIRNFNE------TISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS 99
           VPTFFQIRNFN+      TISKPNKRVC+CK DVVVSK+NLP  V+YSKHH WEIH+NDS
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 100 PVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYF 159
            VV ISTRARKS  GLKALL HVRCSNGL+FE+SKV EKLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 160 GRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQE 219
           GRLQG+GD+KNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDT LHKHPLSSFD+Q+
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTDLHKHPLSSFDDQQ 182

Query: 220 EGKLVFTTSPSEDHVKDDEL-QIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSIN 279
           EGKLVFTTSP ED+VKDD+  QI+HVKLSGM HKSMP+ TQLQEEEVCDLYLISALVSIN
Sbjct: 183 EGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSIN 242

Query: 280 IAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM-------------- 339
           IAVFLFE+ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM              
Sbjct: 243 IAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCW 302

Query: 340 -----GSSRCSQLLDTSY--IWPPRGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQF 399
                G   C +    ++  I+   GVSGNLTSFLHTP+PTVGGTGPVFAMIGAWLSYQF
Sbjct: 303 TLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTGPVFAMIGAWLSYQF 362

Query: 400 QNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVN 459
           QNKDV+TKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSP+ +VN
Sbjct: 363 QNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPLGKVN 422

Query: 460 DASSSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVLQ 492
           DASSSS  RRGQEKGIK+VRKYANPC+S AFFVLFIMGFISLVFF+QPPFHHFGLLSV+Q
Sbjct: 423 DASSSS--RRGQEKGIKVVRKYANPCKSFAFFVLFIMGFISLVFFVQPPFHHFGLLSVIQ 481

[Close]

BLAST of CsGy4G008420 vs. ExPASy TrEMBL
Match: A0A1S3C2H9 (RHOMBOID-like protein 9, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103495725 PE=3 SV=1)

HSP 1 Score: 753 bits (1943), Expect = 9.41e-271
Identity = 393/482 (81.54%), Postives = 423/482 (87.76%), Query Frame = 0


Query: 40  VPTFFQIRNFNE------TISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS 99
           VPTFFQIRNFN+      TISKPNKRVC+CK DVVVSK+NLP  V+YSKHH WEIH+NDS
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 100 PVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYF 159
            VV ISTRARKS  GLKALL HVRCSNGL+FE+SKV EKLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 160 GRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK-DTGLHKHPLSSFDEQ 219
           GRLQG+GD+KNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK DT LHKHPLSSFD+Q
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQ 182

Query: 220 EEGKLVFTTSPSEDHVKDDEL-QIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSI 279
           +EGKLVFTTSP ED+VKDD+  QI+HVKLSGM HKSMP+ TQLQEEEVCDLYLISALVSI
Sbjct: 183 QEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSI 242

Query: 280 NIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM------------- 339
           NIAVFLFE+ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM             
Sbjct: 243 NIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSC 302

Query: 340 ------GSSRCSQLLDTSY--IWPPRGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQ 399
                 G   C +    ++  I+   GVSGNLTSFLHTP+PTVGGTGPVFAMIGAWLSYQ
Sbjct: 303 WTLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTGPVFAMIGAWLSYQ 362

Query: 400 FQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEV 459
           FQNKDV+TKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSP+ +V
Sbjct: 363 FQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPLGKV 422

Query: 460 NDASSSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFHHFGLLSVL 492
           NDASSSS  RRGQEKGIK+VRKYANPC+S AFFVLFIMGFISLVFF+QPPFHHFGLLSV+
Sbjct: 423 NDASSSS--RRGQEKGIKVVRKYANPCKSFAFFVLFIMGFISLVFFVQPPFHHFGLLSVI 482

[Close]

BLAST of CsGy4G008420 vs. ExPASy TrEMBL
Match: A0A1S4E1D5 (RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495725 PE=3 SV=1)

HSP 1 Score: 748 bits (1932), Expect = 5.98e-269
Identity = 392/490 (80.00%), Postives = 423/490 (86.33%), Query Frame = 0


Query: 40  VPTFFQIRNFNE------TISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS 99
           VPTFFQIRNFN+      TISKPNKRVC+CK DVVVSK+NLP  V+YSKHH WEIH+NDS
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 100 PVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYF 159
            VV ISTRARKS  GLKALL HVRCSNGL+FE+SKV EKLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 160 GRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTGLHKHPLSSFDEQE 219
           GRLQG+GD+KNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDT LHKHPLSSFD+Q+
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKDTDLHKHPLSSFDDQQ 182

Query: 220 EGKLVFTTSPSEDHVKDDEL-QIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLI------- 279
           EGKLVFTTSP ED+VKDD+  QI+HVKLSGM HKSMP+ TQLQEEEVCDLYL+       
Sbjct: 183 EGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLMLLLEIYI 242

Query: 280 --SALVSINIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM----- 339
             SALVSINIAVFLFE+ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM     
Sbjct: 243 CRSALVSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSG 302

Query: 340 --------------GSSRCSQLLDTSY--IWPPRGVSGNLTSFLHTPDPTVGGTGPVFAM 399
                         G   C +    ++  I+   GVSGNLTSFLHTP+PTVGGTGPVFAM
Sbjct: 303 VLHVALSCWTLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTGPVFAM 362

Query: 400 IGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGF 459
           IGAWLSYQFQNKDV+TKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGF
Sbjct: 363 IGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGF 422

Query: 460 LTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPFH 492
           LTSP+ +VNDASSSS  RRGQEKGIK+VRKYANPC+S AFFVLFIMGFISLVFF+QPPFH
Sbjct: 423 LTSPLGKVNDASSSS--RRGQEKGIKVVRKYANPCKSFAFFVLFIMGFISLVFFVQPPFH 482

[Close]

BLAST of CsGy4G008420 vs. ExPASy TrEMBL
Match: A0A1S4E0Q3 (RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495725 PE=3 SV=1)

HSP 1 Score: 744 bits (1920), Expect = 4.16e-267
Identity = 392/491 (79.84%), Postives = 423/491 (86.15%), Query Frame = 0


Query: 40  VPTFFQIRNFNE------TISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS 99
           VPTFFQIRNFN+      TISKPNKRVC+CK DVVVSK+NLP  V+YSKHH WEIH+NDS
Sbjct: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62

Query: 100 PVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYF 159
            VV ISTRARKS  GLKALL HVRCSNGL+FE+SKV EKLSQVW+C+TNEKQLRSLGSYF
Sbjct: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122

Query: 160 GRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK-DTGLHKHPLSSFDEQ 219
           GRLQG+GD+KNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK DT LHKHPLSSFD+Q
Sbjct: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQ 182

Query: 220 EEGKLVFTTSPSEDHVKDDEL-QIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLI------ 279
           +EGKLVFTTSP ED+VKDD+  QI+HVKLSGM HKSMP+ TQLQEEEVCDLYL+      
Sbjct: 183 QEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLMLLLEIY 242

Query: 280 ---SALVSINIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM---- 339
              SALVSINIAVFLFE+ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPM    
Sbjct: 243 ICRSALVSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHS 302

Query: 340 ---------------GSSRCSQLLDTSY--IWPPRGVSGNLTSFLHTPDPTVGGTGPVFA 399
                          G   C +    ++  I+   GVSGNLTSFLHTP+PTVGGTGPVFA
Sbjct: 303 GVLHVALSCWTLLTFGRQVCRKYGPFTFFLIYVLGGVSGNLTSFLHTPNPTVGGTGPVFA 362

Query: 400 MIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYG 459
           MIGAWLSYQFQNKDV+TKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYG
Sbjct: 363 MIGAWLSYQFQNKDVVTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYG 422

Query: 460 FLTSPIVEVNDASSSSSSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPPF 492
           FLTSP+ +VNDASSSS  RRGQEKGIK+VRKYANPC+S AFFVLFIMGFISLVFF+QPPF
Sbjct: 423 FLTSPLGKVNDASSSS--RRGQEKGIKVVRKYANPCKSFAFFVLFIMGFISLVFFVQPPF 482

[Close]

BLAST of CsGy4G008420 vs. TAIR 10
Match: AT5G38510.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 203.4 bits (516), Expect = 4.3e-52
Identity = 129/369 (34.96%), Postives = 194/369 (52.57%), Query Frame = 0


Query: 138 ECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK 197
           E    +++L+ L SYFG+LQ   ++ ++ +   +      +    +EL  L AY  K+ K
Sbjct: 72  ENKITKQRLKLLDSYFGKLQNDDEKPSISTGDDID--RKAELNVNEELDSLSAYLDKLQK 131

Query: 198 DTGLHKHPLSSFDEQEEGKLVFTTSPSEDHVKDDELQI-RHVKLSGMIHKSMPNK---TQ 257
           D                 K     S + D VK +   +   ++ +G+ + + P +    +
Sbjct: 132 D----------------AKSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNSPFQQFDDE 191

Query: 258 LQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWR 317
            Q E+  + Y +S L SIN+ V LFE A+PV+N+ + L SLP LYGAKIN+LIL GEWWR
Sbjct: 192 DQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDLILAGEWWR 251

Query: 318 LVTPM-------------------GSSRCSQ--LLDTSYIWPPRGVSGNLTSFLHTPDPT 377
           LVTPM                   G   C    L     I+   GVSGN  SFLHT DPT
Sbjct: 252 LVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMSFLHTADPT 311

Query: 378 VGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTG 437
           VGGTGP FA+IGAWL  Q QNK+++  +  + +F KA++      ILS+ GPID+WT+ G
Sbjct: 312 VGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGPIDDWTNLG 371

Query: 438 AAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLV----RKYANPCRSLAFFVLFIM 478
           A  +G++YGF T P++++    S       +++GI  V    +  A+PC+S   F +F+ 
Sbjct: 372 ALIAGIVYGFFTCPVLQLGSGGSE------RQEGIVTVGPEKQNSADPCKSFLLFTIFVA 416

[Close]

BLAST of CsGy4G008420 vs. TAIR 10
Match: AT5G38510.2 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 203.4 bits (516), Expect = 4.3e-52
Identity = 129/369 (34.96%), Postives = 194/369 (52.57%), Query Frame = 0


Query: 138 ECSTNEKQLRSLGSYFGRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK 197
           E    +++L+ L SYFG+LQ   ++ ++ +   +      +    +EL  L AY  K+ K
Sbjct: 72  ENKITKQRLKLLDSYFGKLQNDDEKPSISTGDDID--RKAELNVNEELDSLSAYLDKLQK 131

Query: 198 DTGLHKHPLSSFDEQEEGKLVFTTSPSEDHVKDDELQI-RHVKLSGMIHKSMPNK---TQ 257
           D                 K     S + D VK +   +   ++ +G+ + + P +    +
Sbjct: 132 D----------------AKSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNSPFQQFDDE 191

Query: 258 LQEEEVCDLYLISALVSINIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWR 317
            Q E+  + Y +S L SIN+ V LFE A+PV+N+ + L SLP LYGAKIN+LIL GEWWR
Sbjct: 192 DQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDLILAGEWWR 251

Query: 318 LVTPM-------------------GSSRCSQ--LLDTSYIWPPRGVSGNLTSFLHTPDPT 377
           LVTPM                   G   C    L     I+   GVSGN  SFLHT DPT
Sbjct: 252 LVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMSFLHTADPT 311

Query: 378 VGGTGPVFAMIGAWLSYQFQNKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTG 437
           VGGTGP FA+IGAWL  Q QNK+++  +  + +F KA++      ILS+ GPID+WT+ G
Sbjct: 312 VGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGPIDDWTNLG 371

Query: 438 AAFSGMLYGFLTSPIVEVNDASSSSSSRRGQEKGIKLV----RKYANPCRSLAFFVLFIM 478
           A  +G++YGF T P++++    S       +++GI  V    +  A+PC+S   F +F+ 
Sbjct: 372 ALIAGIVYGFFTCPVLQLGSGGSE------RQEGIVTVGPEKQNSADPCKSFLLFTIFVA 416

The following BLAST results are available for this feature:

BLAST of CsGy4G008420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX0	6.0e-51	34.96	RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 P...	[more]
P54493	8.8e-10	27.07	Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 ...	[more]

BLAST of CsGy4G008420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137292.3	0.0	92.40	RHOMBOID-like protein 9, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_011653344.2	0.0	92.22	RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucumis sativus]	[more]
XP_011653345.2	0.0	92.01	RHOMBOID-like protein 9, chloroplastic isoform X4 [Cucumis sativus]	[more]
XP_031740072.1	0.0	92.02	RHOMBOID-like protein 9, chloroplastic isoform X3 [Cucumis sativus]	[more]
KAE8649279.1	1.09e-307	91.63	hypothetical protein Csa_015345 [Cucumis sativus]	[more]

BLAST of CsGy4G008420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0I7	2.94e-307	91.61	Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G094530 PE...	[more]
A0A1S3C0U5	1.35e-272	81.70	RHOMBOID-like protein 9, chloroplastic isoform X5 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3C2H9	9.41e-271	81.54	RHOMBOID-like protein 9, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S4E1D5	5.98e-269	80.00	RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S4E0Q3	4.16e-267	79.84	RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of CsGy4G008420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38510.1	4.3e-52	34.96	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G38510.2	4.3e-52	34.96	Rhomboid-related intramembrane serine protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 336..426 e-value: 1.7E-10 score: 41.0
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 336..429 e-value: 2.4E-9 score: 39.1
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 264..427
None	No IPR available	PANTHER	PTHR43731:SF18	RHOMBOID-LIKE PROTEIN 9, CHLOROPLASTIC	coord: 42..319
None	No IPR available	PANTHER	PTHR43731:SF18	RHOMBOID-LIKE PROTEIN 9, CHLOROPLASTIC	coord: 337..482
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 42..319
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 337..482

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G008420.2	CsGy4G008420.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity