CsGy4G008165 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCATTCTCCAATACGTTGATGACACTTTCCTGTTTTGAAAAGATGATATTAGTATGTTGGATGCATTAAGAAGAATCATTGAGCAAATTGAGTGGTGTTCAGGCCAAAAGGTCAATTGGGAAAAGTTTGCACTGTGCGGAGTGAATATGTCTACAACTTCTCAATTGAACTAAAAGGTGGGTTCTTTACTTTTTTATATATTGGTATCCTTCTTGGATGGTTATCCAAGAAAGATTTATTTTTGCTAGCAATAAATTCAAAAGAAGTTGGATAGATGGTTGCGAATTGCGATT CCCATTCTCCAATACGTTGATGACACTTTCCTGTTTTGAAAAGATGATATTAGTATGTTGGATGCATTAAGAAGAATCATTGAGCAAATTGAGTGGTGTTCAGGCCAAAAGGTCAATTGGGAAAAGTTTGCACTGTGCGGAGTGAATATGTCTACAACTTCTCAATTGAACTAAAAGGTGGGTTCTTTACTTTTTTATATATTGGTATCCTTCTTGGATGGTTATCCAAGAAAGATTTATTTTTGCTAGCAATAAATTCAAAAGAAGTTGGATAGATGGTTGCGAATTGCGATT ATGTTGGATGCATTAAGAAGAATCATTGAGCAAATTGAGTGGTGTTCAGGCCAAAAGGTCAATTGGGAAAAGTTTGCACTGTGCGGAGTGAATATGTCTACAACTTCTCAATTGAACTAA MLDALRRIIEQIEWCSGQKVNWEKFALCGVNMSTTSQLN* Homology
BLAST of CsGy4G008165 vs. NCBI nr
Match: TYK01565.1 (hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 4.07e-07 Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of CsGy4G008165 vs. NCBI nr
Match: KAA0048202.1 (hypothetical protein E6C27_scaffold63G001130 [Cucumis melo var. makuwa] >TYK08055.1 hypothetical protein E5676_scaffold265G002030 [Cucumis melo var. makuwa]) HSP 1 Score: 52.8 bits (125), Expect = 4.23e-07 Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of CsGy4G008165 vs. NCBI nr
Match: XP_038879260.1 (uncharacterized mitochondrial protein AtMg01250-like [Benincasa hispida]) HSP 1 Score: 48.5 bits (114), Expect = 1.87e-05 Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 0
BLAST of CsGy4G008165 vs. NCBI nr
Match: XP_038889274.1 (uncharacterized protein LOC120079176 [Benincasa hispida]) HSP 1 Score: 48.1 bits (113), Expect = 9.46e-05 Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of CsGy4G008165 vs. NCBI nr
Match: XP_038880332.1 (uncharacterized protein LOC120071973 [Benincasa hispida]) HSP 1 Score: 48.1 bits (113), Expect = 9.47e-05 Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 0
BLAST of CsGy4G008165 vs. ExPASy TrEMBL
Match: A0A5D3BQV1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001420 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.97e-07 Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of CsGy4G008165 vs. ExPASy TrEMBL
Match: A0A5A7TXF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002030 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.05e-07 Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of CsGy4G008165 vs. ExPASy TrEMBL
Match: A0A5D3C5A3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00260 PE=4 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 8.59e-05 Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 0
BLAST of CsGy4G008165 vs. ExPASy TrEMBL
Match: A0A5D3C786 (Putative ribonuclease H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001010 PE=4 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 1.37e-04 Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of CsGy4G008165 vs. ExPASy TrEMBL
Match: A0A5D3DC03 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00680 PE=4 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.61e-04 Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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