CsGy4G006840 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G006840
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein MODIFYING WALL LIGNIN-2-like
Location	Gy14Chr4: 4947793 .. 4948641 (+)
RNA-Seq Expression	CsGy4G006840
Synteny	CsGy4G006840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAACACCGTTTTGGCTATGCCTTAAGCCTCTCCATCGTTGTCTCACTAGCACTCATTGCCTTTGTCTCGTGTGTAGCTGCAGAATTGCACAGAACAAAGGTACAGACTCAAAAGTTTCATTGTTAAATAAGATTTTGGTTTTTGACTAACAATCCACTGTTTTTGGTAGACGAAAGACCTCAAGTTGGATGGGAAGTTGTGCTATTTGCCTGAAAGTCAAGCATTTGGATATGGGGTTGCAGCTTTGGCCTGTTTGGTTATCGCTCAAGTTATTGGGAATATTTTACTTTGCACGAGTTGCAGTATCAATTCAAGAGAGAAGAAGAGAAGTGAACAACCTCCTAAAAGACCAAATTTAGCCACATTTTTTCTTGTTGTTTCATGGTAGGTGTGATTTTATTTCTCTCGTTTTAACTCATTCATCAACCATTAAGAATTCTTCCAAATCACCAGTCATAGGCATGAGCTCATCATCTGATCTCATTCATCTTCAAATGAAATTTAATTTGATAACATTTCGTTCTTGATTGAGAATCTTCGAAGAGATTCATAAGATTTCCAGAGAAAATAAGAATCAATATATAATTGAACTGTGAATGAGAGTGGATTTGATGTTCTAGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCACGGCGTCGAGTATGAGCAGACAGCAGCCGTACGCGACGGGATGGTTGGGCGGAGAGTGCTACTTGGTGAAAAGCGGTGTATACGTCGCCGCAGCAATTCTAATCCTCATCTCGATATGCTCAACTGTAGGCTCCGCCGTAACAGTTCGAATCAACGAATCCAGAAAATCTACCACACTTCCAAAATGA

mRNA sequence

ATGGGAAAACACCGTTTTGGCTATGCCTTAAGCCTCTCCATCGTTGTCTCACTAGCACTCATTGCCTTTGTCTCGTGTGTAGCTGCAGAATTGCACAGAACAAAGACGAAAGACCTCAAGTTGGATGGGAAGTTGTGCTATTTGCCTGAAAGTCAAGCATTTGGATATGGGGTTGCAGCTTTGGCCTGTTTGGTTATCGCTCAAGTTATTGGGAATATTTTACTTTGCACGAGTTGCAGTATCAATTCAAGAGAGAAGAAGAGAAGTGAACAACCTCCTAAAAGACCAAATTTAGCCACATTTTTTCTTGTTGTTTCATGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCACGGCGTCGAGTATGAGCAGACAGCAGCCGTACGCGACGGGATGGTTGGGCGGAGAGTGCTACTTGGTGAAAAGCGGTGTATACGTCGCCGCAGCAATTCTAATCCTCATCTCGATATGCTCAACTGTAGGCTCCGCCGTAACAGTTCGAATCAACGAATCCAGAAAATCTACCACACTTCCAAAATGA

Coding sequence (CDS)

ATGGGAAAACACCGTTTTGGCTATGCCTTAAGCCTCTCCATCGTTGTCTCACTAGCACTCATTGCCTTTGTCTCGTGTGTAGCTGCAGAATTGCACAGAACAAAGACGAAAGACCTCAAGTTGGATGGGAAGTTGTGCTATTTGCCTGAAAGTCAAGCATTTGGATATGGGGTTGCAGCTTTGGCCTGTTTGGTTATCGCTCAAGTTATTGGGAATATTTTACTTTGCACGAGTTGCAGTATCAATTCAAGAGAGAAGAAGAGAAGTGAACAACCTCCTAAAAGACCAAATTTAGCCACATTTTTTCTTGTTGTTTCATGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCACGGCGTCGAGTATGAGCAGACAGCAGCCGTACGCGACGGGATGGTTGGGCGGAGAGTGCTACTTGGTGAAAAGCGGTGTATACGTCGCCGCAGCAATTCTAATCCTCATCTCGATATGCTCAACTGTAGGCTCCGCCGTAACAGTTCGAATCAACGAATCCAGAAAATCTACCACACTTCCAAAATGA

Protein sequence

MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAALACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK*

Homology

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BLAST of CsGy4G006840 vs. ExPASy Swiss-Prot
Match: O65708 (Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-27
Identity = 67/165 (40.61%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 13  SIVVSLALIAFVSCVAAELHRTKTKDLKLD-GKLCYLPESQAFGYGVAALACLVIAQVIG 72
           S+V SL L++F++C AAE  RT+ +D++ D  + CY+P S AFG G AA+ C  +AQ++G
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 73  NILLCTSCSINSREKKRSEQPPKRPNLA--TFFLVVSWASFTVVILLLSTASSMSRQQPY 132
           NI++      N R + + E   K  +L   T  L++SW++F VV+L+LSTA SMSR Q Y
Sbjct: 68  NIVVFR----NHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAY 127

Query: 133 ATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRK 175
             GWL  +CYLVK GV+ A+  L ++ + +   SA  +++ + ++
Sbjct: 128 GEGWLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQQ 168

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BLAST of CsGy4G006840 vs. ExPASy Swiss-Prot
Match: A2RVU1 (Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 5.2e-24
Identity = 59/154 (38.31%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 20  LIAFVSCVAAELHRTKT----------KDLKLDGKLCYLPESQAFGYGVAALACLVIAQV 79
           L AF  C++AE  + K           KDLK DG+ CYLPE++AFG G+AAL C+ +AQ+
Sbjct: 8   LAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIAALVCVSVAQI 67

Query: 80  IGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTASSMSRQQPY 139
           +GN+++C        +K R+             L+ SW +F V + L+S  +SM+R+Q Y
Sbjct: 68  VGNVVICR--GFTKTDKTRT------TIFCIILLLFSWVNFAVAVTLISVGASMNREQIY 127

Query: 140 ATGWLGGECYLVKSGVYVAAAILILISICSTVGS 164
             GWL  ECYLVK GV+ A+  L + ++ + +G+
Sbjct: 128 GKGWLNRECYLVKDGVFAASGFLSVTTMAAILGA 153

[Close]

BLAST of CsGy4G006840 vs. NCBI nr
Match: XP_011653242.1 (protein MODIFYING WALL LIGNIN-2 [Cucumis sativus] >KGN53467.1 hypothetical protein Csa_014473 [Cucumis sativus])

HSP 1 Score: 342 bits (878), Expect = 2.19e-118
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA
Sbjct: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120
           LACLV+AQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120

Query: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK 180
           SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK
Sbjct: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK 180

[Close]

BLAST of CsGy4G006840 vs. NCBI nr
Match: XP_008451867.1 (PREDICTED: uncharacterized protein LOC103493027 [Cucumis melo] >KAA0040182.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 333 bits (853), Expect = 1.42e-114
Identity = 174/180 (96.67%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           MGKH FGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120
           LACLV+AQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLL  A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLIAA 120

Query: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK 180
           SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISIC+TVGSAVTVR+NESRKSTTLPK
Sbjct: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTVRMNESRKSTTLPK 180

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BLAST of CsGy4G006840 vs. NCBI nr
Match: XP_038895935.1 (protein MODIFYING WALL LIGNIN-2-like [Benincasa hispida])

HSP 1 Score: 298 bits (763), Expect = 7.40e-101
Identity = 155/180 (86.11%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           M KH   Y LSLSI+VSLALIAFVSCVAAELHRTKT DLKLDGKLCYLPES+AFGYGVAA
Sbjct: 1   MEKHHLCYTLSLSIIVSLALIAFVSCVAAELHRTKTNDLKLDGKLCYLPESRAFGYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120
           LACLV+AQVIGNILLCTSC+ N R+KK SEQ PKRPNLAT FL+VSWASFTVVILLLS A
Sbjct: 61  LACLVMAQVIGNILLCTSCNFNLRKKKSSEQSPKRPNLATIFLLVSWASFTVVILLLSAA 120

Query: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK 180
           SSMSR+QPYA GWLGGECYLVKSGVYVAAA+LILIS CSTVGSAVTV+IN+SRKST LPK
Sbjct: 121 SSMSRRQPYAAGWLGGECYLVKSGVYVAAAVLILISTCSTVGSAVTVQINKSRKSTALPK 180

[Close]

BLAST of CsGy4G006840 vs. NCBI nr
Match: KAG6600430.1 (Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264 bits (675), Expect = 2.31e-87
Identity = 142/186 (76.34%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQ-PPKRPNLATFFLVVSWASFTVVILLLST 120
           LACLVIAQVIGN+L CTSCS+NSR KK ++Q PP+R NLA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120

Query: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S CS V SAV V     +I+ESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

[Close]

BLAST of CsGy4G006840 vs. NCBI nr
Match: XP_023543619.1 (uncharacterized protein LOC111803449 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261 bits (666), Expect = 5.41e-86
Identity = 141/186 (75.81%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQ-PPKRPNLATFFLVVSWASFTVVILLLST 120
           LACLVIAQVIGN+L CTSCS+NSR KK ++Q PP+R  LA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S CS V SAV V     +I+ESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

[Close]

BLAST of CsGy4G006840 vs. ExPASy TrEMBL
Match: A0A0A0KYL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056580 PE=4 SV=1)

HSP 1 Score: 342 bits (878), Expect = 1.06e-118
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA
Sbjct: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120
           LACLV+AQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120

Query: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK 180
           SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK
Sbjct: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK 180

[Close]

BLAST of CsGy4G006840 vs. ExPASy TrEMBL
Match: A0A5A7T9R1 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00180 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 6.86e-115
Identity = 174/180 (96.67%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           MGKH FGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120
           LACLV+AQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLL  A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLIAA 120

Query: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK 180
           SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISIC+TVGSAVTVR+NESRKSTTLPK
Sbjct: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTVRMNESRKSTTLPK 180

[Close]

BLAST of CsGy4G006840 vs. ExPASy TrEMBL
Match: A0A1S3BTM2 (uncharacterized protein LOC103493027 OS=Cucumis melo OX=3656 GN=LOC103493027 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 6.86e-115
Identity = 174/180 (96.67%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           MGKH FGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120
           LACLV+AQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLL  A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLIAA 120

Query: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRKSTTLPK 180
           SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISIC+TVGSAVTVR+NESRKSTTLPK
Sbjct: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTVRMNESRKSTTLPK 180

[Close]

BLAST of CsGy4G006840 vs. ExPASy TrEMBL
Match: A0A6J1FSJ4 (uncharacterized protein LOC111446907 OS=Cucurbita moschata OX=3662 GN=LOC111446907 PE=4 SV=1)

HSP 1 Score: 258 bits (658), Expect = 4.33e-85
Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQP-PKRPNLATFFLVVSWASFTVVILLLST 120
           LACLVIAQVIGN+L CTSCS+NSR KK ++Q  P+R  LA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S CS V SAV V     +I+ESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

[Close]

BLAST of CsGy4G006840 vs. ExPASy TrEMBL
Match: A0A6J1C3S2 (uncharacterized protein LOC111008116 OS=Momordica charantia OX=3673 GN=LOC111008116 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 5.94e-85
Identity = 137/185 (74.05%), Postives = 156/185 (84.32%), Query Frame = 0


Query: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60
           M K R GY L+LSIVVSLAL+AFVSC+AAELHRTK KDLKLDGK CYLPE++AFGYGVAA
Sbjct: 1   MEKRRLGYTLTLSIVVSLALVAFVSCIAAELHRTKIKDLKLDGKQCYLPENRAFGYGVAA 60

Query: 61  LACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLSTA 120
           L CLV+AQVIGNILLC S   NSREKK S Q  KRPNLA   LVVSWASFTVVI+LLS A
Sbjct: 61  LVCLVMAQVIGNILLCRSFKFNSREKKCSNQSSKRPNLAIILLVVSWASFTVVIVLLSAA 120

Query: 121 SSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRKS 180
           SSMSR+QPYA GWLGGECYLVK+GV+VA+AILIL+++ STVGSAVT+     +I+ES K+
Sbjct: 121 SSMSRRQPYAAGWLGGECYLVKAGVFVASAILILVTVGSTVGSAVTILRKSLQIDESGKT 180

[Close]

BLAST of CsGy4G006840 vs. TAIR 10
Match: AT4G19370.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 67/165 (40.61%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 13  SIVVSLALIAFVSCVAAELHRTKTKDLKLD-GKLCYLPESQAFGYGVAALACLVIAQVIG 72
           S+V SL L++F++C AAE  RT+ +D++ D  + CY+P S AFG G AA+ C  +AQ++G
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 73  NILLCTSCSINSREKKRSEQPPKRPNLA--TFFLVVSWASFTVVILLLSTASSMSRQQPY 132
           NI++      N R + + E   K  +L   T  L++SW++F VV+L+LSTA SMSR Q Y
Sbjct: 68  NIVVFR----NHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAY 127

Query: 133 ATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTVRINESRK 175
             GWL  +CYLVK GV+ A+  L ++ + +   SA  +++ + ++
Sbjct: 128 GEGWLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQQ 168

[Close]

BLAST of CsGy4G006840 vs. TAIR 10
Match: AT1G31720.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 111.3 bits (277), Expect = 8.2e-25
Identity = 60/164 (36.59%), Postives = 92/164 (56.10%), Query Frame = 0


Query: 10  LSLSIVVSLALIAFVSCVAAELHRTKT----------KDLKLDGKLCYLPESQAFGYGVA 69
           L    +    L AF  C++AE  + K           KDLK DG+ CYLPE++AFG G+A
Sbjct: 17  LFFMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIA 76

Query: 70  ALACLVIAQVIGNILLCTSCSINSREKKRSEQPPKRPNLATFFLVVSWASFTVVILLLST 129
           AL C+ +AQ++GN+++C        +K R+             L+ SW +F V + L+S 
Sbjct: 77  ALVCVSVAQIVGNVVICR--GFTKTDKTRT------TIFCIILLLFSWVNFAVAVTLISV 136

Query: 130 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGS 164
            +SM+R+Q Y  GWL  ECYLVK GV+ A+  L + ++ + +G+
Sbjct: 137 GASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGA 172

The following BLAST results are available for this feature:

BLAST of CsGy4G006840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65708	1.7e-27	40.61	Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=...	[more]
A2RVU1	5.2e-24	38.31	Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=...	[more]

BLAST of CsGy4G006840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653242.1	2.19e-118	99.44	protein MODIFYING WALL LIGNIN-2 [Cucumis sativus] >KGN53467.1 hypothetical prote...	[more]
XP_008451867.1	1.42e-114	96.67	PREDICTED: uncharacterized protein LOC103493027 [Cucumis melo] >KAA0040182.1 DUF...	[more]
XP_038895935.1	7.40e-101	86.11	protein MODIFYING WALL LIGNIN-2-like [Benincasa hispida]	[more]
KAG6600430.1	2.31e-87	76.34	Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543619.1	5.41e-86	75.81	uncharacterized protein LOC111803449 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy4G006840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYL9	1.06e-118	99.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056580 PE=4 SV=1	[more]
A0A5A7T9R1	6.86e-115	96.67	DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3BTM2	6.86e-115	96.67	uncharacterized protein LOC103493027 OS=Cucumis melo OX=3656 GN=LOC103493027 PE=...	[more]
A0A6J1FSJ4	4.33e-85	75.27	uncharacterized protein LOC111446907 OS=Cucurbita moschata OX=3662 GN=LOC1114469...	[more]
A0A6J1C3S2	5.94e-85	74.05	uncharacterized protein LOC111008116 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of CsGy4G006840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19370.1	1.2e-28	40.61	Protein of unknown function (DUF1218)	[more]
AT1G31720.1	8.2e-25	36.59	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 60..157 e-value: 4.5E-16 score: 59.1
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 7..168
None	No IPR available	PANTHER	PTHR31769:SF6	PROTEIN MODIFYING WALL LIGNIN-1	coord: 7..168
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G006840.2	CsGy4G006840.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane