CsGy4G006305 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTCTCTTTCTTTTCTTTTCTCACCTCAGTCACATTCTCAACTCCAAATTCTCCGGCCAACAACCGACGACGGGGGTAGCGATATCATAGTGTTCTGCTGGTATCAATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGACGGGACGACGACGACGACGTCAACGAGGGAGATGGAAGAGAGAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAAGAACTGGAATGGCTAACGGAGCAAATTAAGGAGAAAGGAGGGAAATGTTTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAGAAAAAACAGTCATGAATTGTAGTATTCAATACAATGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAGCTAGAAACAGCAACTCTAGTTGGTAATTAAATCAATTGAAATACATATATATTATTGTTTTGGAGATGAAGGTGTTTCTTTTTCATCCACCTCACTCGTCTCTTTCTCTGTTACCTTTCTCTTATCAAGTAGATTCTTTTTCTAAGCCAGGTCTGTAATTAT CTTCTCTCTTTCTTTTCTTTTCTCACCTCAGTCACATTCTCAACTCCAAATTCTCCGGCCAACAACCGACGACGGGGGTAGCGATATCATAGTGTTCTGCTGGTATCAATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGACGGGACGACGACGACGACGTCAACGAGGGAGATGGAAGAGAGAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAAGAACTGGAATGGCTAACGGAGCAAATTAAGGAGAAAGGAGGGAAATGTTTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAGAAAAAACAGTCATGAATTGTAGTATTCAATACAATGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAGCTAGAAACAGCAACTCTAGTTGGTAATTAAATCAATTGAAATACATATATATTATTGTTTTGGAGATGAAGGTGTTTCTTTTTCATCCACCTCACTCGTCTCTTTCTCTGTTACCTTTCTCTTATCAAGTAGATTCTTTTTCTAAGCCAGGTCTGTAATTAT ATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGACGGGACGACGACGACGACGTCAACGAGGGAGATGGAAGAGAGAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAAGAACTGGAATGGCTAACGGAGCAAATTAAGGAGAAAGGAGGGAAATGTTTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAGAAAAAACAGTCATGAATTGTAGTATTCAATACAATGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAG MGNCVEVLSRQREEDGTTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGGKCLEELLEEIERGRREKTVMNCSIQYNVSWKPSLESIMECPEIPDHMFR* Homology
BLAST of CsGy4G006305 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus]) HSP 1 Score: 210 bits (535), Expect = 1.90e-68 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsGy4G006305 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127 bits (319), Expect = 1.42e-35 Identity = 69/105 (65.71%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of CsGy4G006305 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata]) HSP 1 Score: 117 bits (293), Expect = 1.29e-31 Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of CsGy4G006305 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115 bits (288), Expect = 7.66e-31 Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of CsGy4G006305 vs. NCBI nr
Match: KAG7031156.1 (hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 111 bits (278), Expect = 2.54e-29 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of CsGy4G006305 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1) HSP 1 Score: 210 bits (535), Expect = 9.20e-69 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsGy4G006305 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1) HSP 1 Score: 117 bits (293), Expect = 6.25e-32 Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of CsGy4G006305 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1) HSP 1 Score: 105 bits (262), Expect = 3.23e-27 Identity = 64/112 (57.14%), Postives = 79/112 (70.54%), Query Frame = 0
BLAST of CsGy4G006305 vs. ExPASy TrEMBL
Match: A0A438J5K9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_015680 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.20e-17 Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 0
BLAST of CsGy4G006305 vs. ExPASy TrEMBL
Match: F6HU23 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g01450 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.20e-17 Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 0
BLAST of CsGy4G006305 vs. TAIR 10
Match: AT1G64405.1 (unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 3.3e-05 Identity = 32/115 (27.83%), Postives = 61/115 (53.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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