CsGy4G005210 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G005210
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	dehydrin DHN1
Location	Gy14Chr4: 3761122 .. 3762260 (-)
RNA-Seq Expression	CsGy4G005210
Synteny	CsGy4G005210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACATTCTCAAAACTAATCACTCTTTAAATTGTATTCAGTTCTTTTCGTTGTGTTTCGGTTTCCAAAGAAGTATGGCGCATTACCAATCTGGAAGAACCGATCAGTACGGCAACCCAATTCGCCAGACTGATGAATATGGCAACGTCATCTCCGAGACCGGTCAGTACGGTGACCCCCTTCGTCGGACCGGTGAGTTCCGTGAAACTGACCAGTATGGAAACCCTGGGCGTCGGACTGATGATGTGTTCGGTAACCCAGTTGGAACTGGGACGGGGATGGGGACCGGTGGGACGTATGAGACGACCGGGTACGGTGGGACAGGGTATGGCGGAGGGCACCATCAGCAGCATAAGGAGCATGGTGGCATACTTCATCGCTCTGGAAGCTCCAGTTCTAGCTCCGTAAGTGTATCCTAATCTCATCTTAATCCTTCACAATTCTTTTTAAAAATCTTATTTTAAGATAAAATAGAATTGAAGGAAATTATTTTTTATAACAAAAAGTGATATTTTGGTACATTTTTATTGGAAAAAAAGGATAATCGTCTCTAATAAAATCATCTCTCCCATTTCTTCATCCTATACACCAATAACTTTTTTTTGAAGTGAAACGTACTTGTGTCCTGAGTATTTTTAGTCTTTCTCCTGTGTAGGCTCTACAAGAAGGATTTTAGAATAACATAAAATTAAATTTCTACTTTCAGTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAGGAGAAGGTAAAGGAGAAGCTGCCAGGACATCATCGTCATGAAGAGCAAGCAGTGTCAACCACGACACCGGGAGGTTATACGTCGGCGGAGTACGGTGGGCAGCATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAGCTTCCGGGACATCACTGAGAATGACCTACTCGCTGTCCATGTTTGTTTGTTGTTTATATTAATAAAACTACCGCTGTGATCTTAGAAGGGATATCATCGATAAAGTATATATAAAAAGAAGGCTGTTATGTCGTCACATATGATTAAATAATTTTAAGGACTAGCTTGGTTGATGTGTTATGTTTGTGTGTATTATGTATAACTTCTGGTTGTGGTTGAATCAACAATGTTTCTCAATATGTTACTAA

mRNA sequence

CAACATTCTCAAAACTAATCACTCTTTAAATTGTATTCAGTTCTTTTCGTTGTGTTTCGGTTTCCAAAGAAGTATGGCGCATTACCAATCTGGAAGAACCGATCAGTACGGCAACCCAATTCGCCAGACTGATGAATATGGCAACGTCATCTCCGAGACCGGTCAGTACGGTGACCCCCTTCGTCGGACCGGTGAGTTCCGTGAAACTGACCAGTATGGAAACCCTGGGCGTCGGACTGATGATGTGTTCGGTAACCCAGTTGGAACTGGGACGGGGATGGGGACCGGTGGGACGTATGAGACGACCGGGTACGGTGGGACAGGGTATGGCGGAGGGCACCATCAGCAGCATAAGGAGCATGGTGGCATACTTCATCGCTCTGGAAGCTCCAGTTCTAGCTCCTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAGGAGAAGGTAAAGGAGAAGCTGCCAGGACATCATCGTCATGAAGAGCAAGCAGTGTCAACCACGACACCGGGAGGTTATACGTCGGCGGAGTACGGTGGGCAGCATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAGCTTCCGGGACATCACTGAGAATGACCTACTCGCTGTCCATGTTTGTTTGTTGTTTATATTAATAAAACTACCGCTGTGATCTTAGAAGGGATATCATCGATAAAGTATATATAAAAAGAAGGCTGTTATGTCGTCACATATGATTAAATAATTTTAAGGACTAGCTTGGTTGATGTGTTATGTTTGTGTGTATTATGTATAACTTCTGGTTGTGGTTGAATCAACAATGTTTCTCAATATGTTACTAA

Coding sequence (CDS)

ATGGCGCATTACCAATCTGGAAGAACCGATCAGTACGGCAACCCAATTCGCCAGACTGATGAATATGGCAACGTCATCTCCGAGACCGGTCAGTACGGTGACCCCCTTCGTCGGACCGGTGAGTTCCGTGAAACTGACCAGTATGGAAACCCTGGGCGTCGGACTGATGATGTGTTCGGTAACCCAGTTGGAACTGGGACGGGGATGGGGACCGGTGGGACGTATGAGACGACCGGGTACGGTGGGACAGGGTATGGCGGAGGGCACCATCAGCAGCATAAGGAGCATGGTGGCATACTTCATCGCTCTGGAAGCTCCAGTTCTAGCTCCTCGGAAGATGATGGGCATGGAGGGAGGAGGAAGAAGGGGCTGAAGGAGAAGGTAAAGGAGAAGCTGCCAGGACATCATCGTCATGAAGAGCAAGCAGTGTCAACCACGACACCGGGAGGTTATACGTCGGCGGAGTACGGTGGGCAGCATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAGCTTCCGGGACATCACTGA

Protein sequence

MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFGNPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRRKKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH*

Homology

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BLAST of CsGy4G005210 vs. ExPASy Swiss-Prot
Match: P30185 (Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-27
Identity = 99/193 (51.30%), Postives = 115/193 (59.59%), Query Frame = 0


Query: 1   MAHYQS----GRTDQYGNPIRQT-DEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRT 60
           MA YQ+      TD+YGNPI+Q  DEYGN +   G YG      G       YG  G+  
Sbjct: 1   MASYQNRPGGQATDEYGNPIQQQYDEYGNPMG-GGGYG--TGGGGGATGGQGYGTGGQG- 60

Query: 61  DDVFGNPVGTGTGMGTGGTYETTGYG----GTGYGGGHH---QQHKEH----GGILHRSG 120
              +G+    G G GTGG    TG G    GTG G  HH   Q HKE     GG+LHRSG
Sbjct: 61  ---YGS---GGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSG 120

Query: 121 SSSSSSSEDDGHGGRRKKGLKEKVKEKLPGHHRHEEQAVSTTTPG-GYTSAEYGGQ-HEK 176
           S SSSSSEDDG GGRRKKG+ +K+KEKLPGHH    QA +    G GY +  YGG+ HEK
Sbjct: 121 SGSSSSSEDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEK 180

[Close]

BLAST of CsGy4G005210 vs. ExPASy Swiss-Prot
Match: P12950 (Dehydrin DHN1 OS=Zea mays OX=4577 GN=DHN1 PE=1 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-25
Identity = 88/172 (51.16%), Postives = 100/172 (58.14%), Query Frame = 0


Query: 28  ETGQYGDPLRRTGEFRETDQYGNP-GRRTDDVFGNPVGTGTGMGTGGTYETTGYGGTGYG 87
           E GQ G   R  G     DQYGNP G       G   GTGT   TGG  +   +GG G G
Sbjct: 2   EYGQQGQ--RGHGRTGHVDQYGNPVGGVEHGTGGMRHGTGT---TGGMGQLGEHGGAGMG 61

Query: 88  GGHHQQHKEH---GGILHRSGSSSSSSSEDDGHGGRRKKGLKEKVKEKLPGHHRHEEQAV 147
           GG  Q  +E    GGILHRSGSSSSSSSEDDG GGRRKKG+KEK+KEKLPG H+ ++ A 
Sbjct: 62  GGQFQPAREEHKTGGILHRSGSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGHKDDQHAT 121

Query: 148 STTTPG----GYTSAEYG--------------GQHEKKGIMEKIKEKLPGHH 178
           +TT       G+T + YG              G  EKKGIM+KIKEKLPG H
Sbjct: 122 ATTGGAYGQQGHTGSAYGQQGHTGGAYATGTEGTGEKKGIMDKIKEKLPGQH 168

[Close]

BLAST of CsGy4G005210 vs. ExPASy Swiss-Prot
Match: Q96261 (Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.3e-23
Identity = 82/183 (44.81%), Postives = 103/183 (56.28%), Query Frame = 0


Query: 10  DQYGNPIRQTDEYGN-VISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFGNPVGT--- 69
           D+ GNPI  TD  GN ++  T ++G+P+  TG    T Q+      T D+  +P  T   
Sbjct: 6   DEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKE--STTSDIAEHPTSTVGE 65

Query: 70  --------GTGMGTGGTYE--TTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDG 129
                   G G  T  T    + G G T  G  HH   +EH   L RSGSSSSSSSEDDG
Sbjct: 66  THPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEH---LRRSGSSSSSSSEDDG 125

Query: 130 HGGRRKKGLKEKVKEKL-PGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLP 178
            GGRRKK +KEK+KEK   G H+ E+   + TT G  T+ +    HEKKGI+EKIK+KLP
Sbjct: 126 QGGRRKKSIKEKIKEKFGSGKHKDEQTPATATTTGPATTDQ---PHEKKGILEKIKDKLP 180

[Close]

BLAST of CsGy4G005210 vs. ExPASy Swiss-Prot
Match: P21298 (Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.3e-23
Identity = 82/184 (44.57%), Postives = 96/184 (52.17%), Query Frame = 0


Query: 10  DQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFGN-------- 69
           D+ GNPI  TD YGN +  + ++G+P+  TG      QY       D V GN        
Sbjct: 6   DERGNPIHLTDAYGNPVQLSDEFGNPMHITGVASSAPQY------KDSVTGNIAEYPTEA 65

Query: 70  -PVGTGTGMGTGGTYET-TGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGR 129
            P G   G G   T         T  G  HH    EH   L RSGSSSSSSSEDDG GGR
Sbjct: 66  PPAGVAAGTGAAATTAAGVTTSETTTGQEHHGSLGEH---LRRSGSSSSSSSEDDGQGGR 125

Query: 130 RKKGLKEKVKEKLPGHHRHEEQAVSTTTPGG------YTSAEYGGQHEKKGIMEKIKEKL 178
           RKK +K+K+K+KL G    +EQ  +T T  G       T A     HEKKGI+EKIKEKL
Sbjct: 126 RKKSIKDKIKDKLGGGKHKDEQTPTTATTTGPTTTTTTTGAAADQHHEKKGILEKIKEKL 180

[Close]

BLAST of CsGy4G005210 vs. ExPASy Swiss-Prot
Match: A2ZDX9 (Water stress-inducible protein Rab21 OS=Oryza sativa subsp. indica OX=39946 GN=RAB21 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 5.6e-23
Identity = 84/168 (50.00%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 47  QYGNPGRRTDDVFGNPVGTGTG---MGTG-----------GTYETTG----YGGTGYGGG 106
           Q+G+   R D+ +GNPVGTG G   MGT            GT+ TTG    +G TG GGG
Sbjct: 6   QHGHVTSRVDE-YGNPVGTGAGHGQMGTAGMGTHGTTGGMGTHGTTGGMGTHGTTGTGGG 65

Query: 107 HHQQHKEH---GGILHRSGSSSSSSSEDDGHGGRRKKGLKEKVKEKLPGHHRHEEQAVST 166
             Q  +E    GG+L RSGSSSSSSSEDDG GGRRKKG+KEK+KEKLPG ++ E+Q    
Sbjct: 66  QFQPMREEHKTGGVLQRSGSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGEQQHAMG 125

Query: 167 TTPGGYTSAEYG--------GQH--------EKKGIMEKIKEKLPGHH 178
            T G Y    +G        G H        EKKGIM+KIKEKLPG H
Sbjct: 126 GTGGAYGQQGHGTGMTTGTTGAHGTTTTDTGEKKGIMDKIKEKLPGQH 172

[Close]

BLAST of CsGy4G005210 vs. NCBI nr
Match: KGN53289.1 (hypothetical protein Csa_015043 [Cucumis sativus])

HSP 1 Score: 359 bits (921), Expect = 4.82e-125
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60
           MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG
Sbjct: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60

Query: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120
           NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177
           KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of CsGy4G005210 vs. NCBI nr
Match: XP_011653150.2 (dehydrin Rab18 [Cucumis sativus])

HSP 1 Score: 359 bits (921), Expect = 5.47e-123
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60
           MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG
Sbjct: 136 MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 195

Query: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120
           NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR
Sbjct: 196 NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 255

Query: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177
           KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH
Sbjct: 256 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 312

[Close]

BLAST of CsGy4G005210 vs. NCBI nr
Match: XP_008452109.1 (PREDICTED: dehydrin DHN1 [Cucumis melo] >KAA0044783.1 dehydrin DHN1 [Cucumis melo var. makuwa] >TYK16682.1 dehydrin DHN1 [Cucumis melo var. makuwa])

HSP 1 Score: 338 bits (866), Expect = 1.18e-116
Identity = 168/177 (94.92%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60
           MAHYQSG TDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNP RRTDDVFG
Sbjct: 1   MAHYQSGGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRTDDVFG 60

Query: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120
           NPVGTGTGMGTGGTYET+GYGG GYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177
           KKGLKEKVKEKLPG H HE QAVSTTTPGGY SAE+GGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of CsGy4G005210 vs. NCBI nr
Match: XP_038902571.1 (dehydrin Xero 1-like [Benincasa hispida])

HSP 1 Score: 296 bits (758), Expect = 2.78e-100
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60
           MAHYQSG TDQYGNPIRQTDEYGNVIS+T QYGDPLRRTGEFRETDQYGNP  RTD+ FG
Sbjct: 1   MAHYQSG-TDQYGNPIRQTDEYGNVISDTAQYGDPLRRTGEFRETDQYGNPVHRTDE-FG 60

Query: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120
           NP+ TGTG    GTYET GYGGTGYGG HHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR
Sbjct: 61  NPISTGTG----GTYETGGYGGTGYGGEHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 -KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177
            KKGLKEKVKEK+PGHH HE QA+STTTPGGY+SA+YGGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 RKKGLKEKVKEKMPGHH-HEPQAMSTTTPGGYSSAQYGGQHEKKGIMEKIKEKLPGHH 171

[Close]

BLAST of CsGy4G005210 vs. NCBI nr
Match: XP_022136834.1 (dehydrin Xero 1-like [Momordica charantia])

HSP 1 Score: 253 bits (646), Expect = 4.66e-83
Identity = 143/188 (76.06%), Postives = 153/188 (81.38%), Query Frame = 0


Query: 1   MAHYQS-----GRTDQYGNPIRQTDEYGNVISETG--QYGDPLRRTGEFRETDQYGNPGR 60
           MAHYQ+       TDQYGNPIR+TDEYGNVIS+TG  QYGDPL RT EFR+TDQYGNP R
Sbjct: 1   MAHYQNQYGAQSGTDQYGNPIRRTDEYGNVISDTGVGQYGDPLHRTDEFRQTDQYGNPVR 60

Query: 61  RTDDVFGNPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSED 120
           RTD+ FGNP+GTG     G TYE  GYGGTGYGGGHHQ HKEH G+L RSGSSSSSSSED
Sbjct: 61  RTDE-FGNPIGTG-----GATYEAGGYGGTGYGGGHHQ-HKEHQGVLRRSGSSSSSSSED 120

Query: 121 DGHGGRRKKGLKEKVKEKLPGHHRHEEQ--AVSTTTPGGYTSAEYG--GQHEKKGIMEKI 177
           DGHGGRRKKGLKEK+KEKLPGHH  ++Q  A STTTPGGY SAEYG  G  EKKGIMEKI
Sbjct: 121 DGHGGRRKKGLKEKIKEKLPGHHDPQQQSHAASTTTPGGYGSAEYGSGGYQEKKGIMEKI 180

[Close]

BLAST of CsGy4G005210 vs. ExPASy TrEMBL
Match: A0A0A0KWM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045040 PE=3 SV=1)

HSP 1 Score: 359 bits (921), Expect = 2.33e-125
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60
           MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG
Sbjct: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60

Query: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120
           NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177
           KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of CsGy4G005210 vs. ExPASy TrEMBL
Match: A0A5D3CYN8 (Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 PE=3 SV=1)

HSP 1 Score: 338 bits (866), Expect = 5.69e-117
Identity = 168/177 (94.92%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60
           MAHYQSG TDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNP RRTDDVFG
Sbjct: 1   MAHYQSGGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRTDDVFG 60

Query: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120
           NPVGTGTGMGTGGTYET+GYGG GYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177
           KKGLKEKVKEKLPG H HE QAVSTTTPGGY SAE+GGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of CsGy4G005210 vs. ExPASy TrEMBL
Match: A0A1S3BTX2 (dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1)

HSP 1 Score: 338 bits (866), Expect = 5.69e-117
Identity = 168/177 (94.92%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60
           MAHYQSG TDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNP RRTDDVFG
Sbjct: 1   MAHYQSGGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRTDDVFG 60

Query: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120
           NPVGTGTGMGTGGTYET+GYGG GYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177
           KKGLKEKVKEKLPG H HE QAVSTTTPGGY SAE+GGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of CsGy4G005210 vs. ExPASy TrEMBL
Match: A0A6J1C5G3 (dehydrin Xero 1-like OS=Momordica charantia OX=3673 GN=LOC111008435 PE=3 SV=1)

HSP 1 Score: 253 bits (646), Expect = 2.26e-83
Identity = 143/188 (76.06%), Postives = 153/188 (81.38%), Query Frame = 0


Query: 1   MAHYQS-----GRTDQYGNPIRQTDEYGNVISETG--QYGDPLRRTGEFRETDQYGNPGR 60
           MAHYQ+       TDQYGNPIR+TDEYGNVIS+TG  QYGDPL RT EFR+TDQYGNP R
Sbjct: 1   MAHYQNQYGAQSGTDQYGNPIRRTDEYGNVISDTGVGQYGDPLHRTDEFRQTDQYGNPVR 60

Query: 61  RTDDVFGNPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSED 120
           RTD+ FGNP+GTG     G TYE  GYGGTGYGGGHHQ HKEH G+L RSGSSSSSSSED
Sbjct: 61  RTDE-FGNPIGTG-----GATYEAGGYGGTGYGGGHHQ-HKEHQGVLRRSGSSSSSSSED 120

Query: 121 DGHGGRRKKGLKEKVKEKLPGHHRHEEQ--AVSTTTPGGYTSAEYG--GQHEKKGIMEKI 177
           DGHGGRRKKGLKEK+KEKLPGHH  ++Q  A STTTPGGY SAEYG  G  EKKGIMEKI
Sbjct: 121 DGHGGRRKKGLKEKIKEKLPGHHDPQQQSHAASTTTPGGYGSAEYGSGGYQEKKGIMEKI 180

[Close]

BLAST of CsGy4G005210 vs. ExPASy TrEMBL
Match: A0A6J1FRT8 (dehydrin Rab16B-like OS=Cucurbita moschata OX=3662 GN=LOC111447593 PE=3 SV=1)

HSP 1 Score: 252 bits (643), Expect = 4.61e-83
Identity = 136/179 (75.98%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60
           M+H+QSG TDQYGNP+RQTDEYGNVI  TGQ  DP  RTGEFRETDQYGNP RR  + +G
Sbjct: 1   MSHFQSG-TDQYGNPVRQTDEYGNVIHGTGQRVDPHHRTGEFRETDQYGNPVRRGGE-YG 60

Query: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSS-EDDGHGGR 120
           +P+GTG      GTYET G+GG GYGGGH QQHKEHGG+L RSGSSSSSSS EDDGHGGR
Sbjct: 61  DPIGTG------GTYETGGHGGVGYGGGHQQQHKEHGGVLRRSGSSSSSSSSEDDGHGGR 120

Query: 121 RKKGLKEKVKEKLPGHHRHEEQ--AVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGH 176
           RKKGLKEK+KEKLPGHH   +Q  A STTTPGGY+S E+GGQHEKKGIM+KIKEKLPGH
Sbjct: 121 RKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPGH 171

[Close]

BLAST of CsGy4G005210 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein )

HSP 1 Score: 122.1 bits (305), Expect = 4.5e-28
Identity = 99/193 (51.30%), Postives = 115/193 (59.59%), Query Frame = 0


Query: 1   MAHYQS----GRTDQYGNPIRQT-DEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRT 60
           MA YQ+      TD+YGNPI+Q  DEYGN +   G YG      G       YG  G+  
Sbjct: 1   MASYQNRPGGQATDEYGNPIQQQYDEYGNPMG-GGGYG--TGGGGGATGGQGYGTGGQG- 60

Query: 61  DDVFGNPVGTGTGMGTGGTYETTGYG----GTGYGGGHH---QQHKEH----GGILHRSG 120
              +G+    G G GTGG    TG G    GTG G  HH   Q HKE     GG+LHRSG
Sbjct: 61  ---YGS---GGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSG 120

Query: 121 SSSSSSSEDDGHGGRRKKGLKEKVKEKLPGHHRHEEQAVSTTTPG-GYTSAEYGGQ-HEK 176
           S SSSSSEDDG GGRRKKG+ +K+KEKLPGHH    QA +    G GY +  YGG+ HEK
Sbjct: 121 SGSSSSSEDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEK 180

[Close]

BLAST of CsGy4G005210 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein )

HSP 1 Score: 115.5 bits (288), Expect = 4.3e-26
Identity = 98/193 (50.78%), Postives = 114/193 (59.07%), Query Frame = 0


Query: 1   MAHYQS----GRTDQYGNPIRQT-DEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRT 60
           MA YQ+      TD+YGNPI+Q  DEYGN +   G YG      G       YG  G+  
Sbjct: 1   MASYQNRPGGQATDEYGNPIQQQYDEYGNPMG-GGGYG--TGGGGGATGGQGYGTGGQG- 60

Query: 61  DDVFGNPVGTGTGMGTGGTYETTGYG----GTGYGGGHH---QQHKEH----GGILHRSG 120
              +G+    G G GTGG    TG G    GTG G  HH   Q HKE     GG+LHRSG
Sbjct: 61  ---YGS---GGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSG 120

Query: 121 SSSSSSSEDDGHGGRRKKGLKEKVKEKLPGHHRHEEQAVSTTTPG-GYTSAEYGGQ-HEK 176
           S SSSSS DDG GGRRKKG+ +K+KEKLPGHH    QA +    G GY +  YGG+ HEK
Sbjct: 121 SGSSSSS-DDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEK 180

[Close]

BLAST of CsGy4G005210 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA )

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24
Identity = 82/183 (44.81%), Postives = 103/183 (56.28%), Query Frame = 0


Query: 10  DQYGNPIRQTDEYGN-VISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFGNPVGT--- 69
           D+ GNPI  TD  GN ++  T ++G+P+  TG    T Q+      T D+  +P  T   
Sbjct: 6   DEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKE--STTSDIAEHPTSTVGE 65

Query: 70  --------GTGMGTGGTYE--TTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDG 129
                   G G  T  T    + G G T  G  HH   +EH   L RSGSSSSSSSEDDG
Sbjct: 66  THPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEH---LRRSGSSSSSSSEDDG 125

Query: 130 HGGRRKKGLKEKVKEKL-PGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLP 178
            GGRRKK +KEK+KEK   G H+ E+   + TT G  T+ +    HEKKGI+EKIK+KLP
Sbjct: 126 QGGRRKKSIKEKIKEKFGSGKHKDEQTPATATTTGPATTDQ---PHEKKGILEKIKDKLP 180

[Close]

BLAST of CsGy4G005210 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 85.9 bits (211), Expect = 3.6e-17
Identity = 66/124 (53.23%), Postives = 74/124 (59.68%), Query Frame = 0


Query: 57  DVFGNPVGTGTG-MGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDG 116
           D FGNP    TG  GT G     G      GGG         G+LHRSGSSSSSSSEDDG
Sbjct: 18  DQFGNPFPATTGAYGTAG-----GAPAVAEGGG-------LSGMLHRSGSSSSSSSEDDG 77

Query: 117 HGGRR--KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKL 176
            GGRR  KKG+ EK+KEKLPGHH   + +   +T   Y +      HEKKG+MEKIKEKL
Sbjct: 78  LGGRRRKKKGITEKIKEKLPGHHDSNKTSSLGSTTTAYDTGTV--HHEKKGMMEKIKEKL 127

Query: 177 PGHH 178
           PG H
Sbjct: 138 PGGH 127

[Close]

BLAST of CsGy4G005210 vs. TAIR 10
Match: AT1G20440.1 (cold-regulated 47 )

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13
Identity = 48/95 (50.53%), Postives = 58/95 (61.05%), Query Frame = 0


Query: 100 LHRSGSSSSSSSEDDG-----------HGGRRKKGLKEKVKEKLPGHH---RHEEQAVST 159
           LHRS SSSSSSS+++G            G   KKGL EK+KEKLPGHH     ++  VST
Sbjct: 104 LHRSNSSSSSSSDEEGEEKKEKKKKIVEGEEDKKGLVEKIKEKLPGHHDKTAEDDVPVST 163

Query: 160 TTPGGYTSAEYGGQH---EKKGIMEKIKEKLPGHH 178
           T P   + +     H   EKKG++EKIKEKLPGHH
Sbjct: 164 TIPVPVSESVVEHDHPEEEKKGLVEKIKEKLPGHH 198

The following BLAST results are available for this feature:

BLAST of CsGy4G005210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30185	6.4e-27	51.30	Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1	[more]
P12950	2.1e-25	51.16	Dehydrin DHN1 OS=Zea mays OX=4577 GN=DHN1 PE=1 SV=2	[more]
Q96261	3.3e-23	44.81	Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1	[more]
P21298	3.3e-23	44.57	Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1	[more]
A2ZDX9	5.6e-23	50.00	Water stress-inducible protein Rab21 OS=Oryza sativa subsp. indica OX=39946 GN=R...	[more]

BLAST of CsGy4G005210 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53289.1	4.82e-125	100.00	hypothetical protein Csa_015043 [Cucumis sativus]	[more]
XP_011653150.2	5.47e-123	100.00	dehydrin Rab18 [Cucumis sativus]	[more]
XP_008452109.1	1.18e-116	94.92	PREDICTED: dehydrin DHN1 [Cucumis melo] >KAA0044783.1 dehydrin DHN1 [Cucumis mel...	[more]
XP_038902571.1	2.78e-100	87.64	dehydrin Xero 1-like [Benincasa hispida]	[more]
XP_022136834.1	4.66e-83	76.06	dehydrin Xero 1-like [Momordica charantia]	[more]

BLAST of CsGy4G005210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWM9	2.33e-125	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045040 PE=3 SV=1	[more]
A0A5D3CYN8	5.69e-117	94.92	Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 ...	[more]
A0A1S3BTX2	5.69e-117	94.92	dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1	[more]
A0A6J1C5G3	2.26e-83	76.06	dehydrin Xero 1-like OS=Momordica charantia OX=3673 GN=LOC111008435 PE=3 SV=1	[more]
A0A6J1FRT8	4.61e-83	75.98	dehydrin Rab16B-like OS=Cucurbita moschata OX=3662 GN=LOC111447593 PE=3 SV=1	[more]

BLAST of CsGy4G005210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66400.1	4.5e-28	51.30	Dehydrin family protein	[more]
AT5G66400.2	4.3e-26	50.78	Dehydrin family protein	[more]
AT2G21490.1	2.3e-24	44.81	dehydrin LEA	[more]
AT3G50980.1	3.6e-17	53.23	dehydrin xero 1	[more]
AT1G20440.1	3.2e-13	50.53	cold-regulated 47	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 8..177 e-value: 4.5E-43 score: 147.6
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 31..177 coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..142
None	No IPR available	PANTHER	PTHR33346:SF29	DEHYDRIN RAB18	coord: 31..177 coord: 1..41
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 168..175
IPR030513	Dehydrin, conserved site	PROSITE	PS00315	DEHYDRIN_1	coord: 107..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G005210.2	CsGy4G005210.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009415	response to water
cellular_component	GO:0005829	cytosol