CsGy4G004815 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G004815
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Plus3 domain-containing protein
Location	Gy14Chr4: 3403883 .. 3405865 (+)
RNA-Seq Expression	CsGy4G004815
Synteny	CsGy4G004815

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATTTAGAAAATTTACTTCTTGAAGCTGCTGGAAGAACTAATGCAGCAGGGAGAAATAGACACTCTCATCCACCATCGCGAAGGCAACGTGAAGGTTCATATTCTGATGCTGGAAGTGACTCTAGGGATGATGACTCAGATGATGATCGTGGTTATGCAAGCAGGAAGCCCTCTGGATCTCAGGTTCCTCTGAAGAAAAGGTTAGATCCTACTGAAAGGGATGATGATGGAGGCAGCCAAGAGGAAGGGGAAGACGAAGATGTTGGTTCAGAACGTGAGGGTGACAGCAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGATAGGCGCAAGCTTGCTGGTATGTCTGAACTTCAAAGAGAGATGATTCTGTCAGACAGAGCATCTAAGAAGAACGATAAGCATTTATATGAAAGTTTGAGAGCTAAAATGGATAAAGGGAAGAGTGCCCCATCTCGGAAAGAGACTCCACCTCTCCCATCATCTCGTATTAGATCGTCGGCCAGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCCTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCAGAGGCTCATCGCAAGCTGAGAGATGCATCTAGAGGAAATGCAAATAGTCGACGGTTCTCACCAACAAAACGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGATGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGATGATGAGAGATCCATACCTGGGTCAGATGGGCCAACATTTGAAGATATCAAGGAAGTTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTTGGAATTGGGAGATCAAGATCTGGGCCTATCTATAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCTGACCGTCAGTATAAACTAGAGAACAAAATCACACATAAATATCTTAATGTTATTTGGGGAAATGAAGCTTCTGCCGCCAGGTGGCAGATGGCCATGGTTTCAGACTCTGCTCCACTCGAGGATGAATATAAACAGTGGGTTAAAGAGGTAGAGCGAACTGGCGGTCGGATGCTGAGCAAGCAGGATATATTGGAAAAGAAGGAAGCTATACAGAAAGTCAACAACTTTGTCTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGATAAAAAATCTGCCTCAGCAAGACCGTTAAATATTGCAGCTGAGAAGGACCGGTTGAGGAGAGAGATGGACGTAGCAGTAAGCAAGAACGATGAAGCTGAGGTGGAAAGGATCAAAACAAGGCTGCAGCAACTAGAGGCATCCAGGAGGTTGCAGATGAAAGATGCCAAAGCTATTCGGTTAGCTGAGATGAACAGGAAGAATAGGGTGGAAAACTTCAAAAATGCATCAGAACTAAGACCTCTGAAAGATTTGAAAGCTGGAGAGGCTGGTTACGATCCTTTCTCAAGGAGATGGACCAGGTCAAGGAATTATTATGTTTCCAATGCTGGTGAAGCCAATGGAGCTGCTGAAGCAGCTGGAAACAGTGACAATGTAACACCTGCATTGGAGAATACTAGAACTGAAGCTGGTGGTACTTCAGATGCTGGAATGGCAGCTACCGCAGCGGCCTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTTGATACTAATGCTCCTGTAGATGGAGGGACGGAGTCAAACTCGCTGCACAACTTCGAGCTGCCTATATCGTTGGCTATGCTTCAGAAATTTGGTGGTGCCCTCGGAGCGCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGACGTCAAGTCCCTGAGAATGATGGTAGGCGGCATGCACTGACACTTACTGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGA

mRNA sequence

ATGGCAGATTTAGAAAATTTACTTCTTGAAGCTGCTGGAAGAACTAATGCAGCAGGGAGAAATAGACACTCTCATCCACCATCGCGAAGGCAACGTGAAGGTTCATATTCTGATGCTGGAAGTGACTCTAGGGATGATGACTCAGATGATGATCGTGGTTATGCAAGCAGGAAGCCCTCTGGATCTCAGGTTCCTCTGAAGAAAAGGTTAGATCCTACTGAAAGGGATGATGATGGAGGCAGCCAAGAGGAAGGGGAAGACGAAGATGTTGGTTCAGAACGTGAGGGTGACAGCAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGATAGGCGCAAGCTTGCTGGTATGTCTGAACTTCAAAGAGAGATGATTCTGTCAGACAGAGCATCTAAGAAGAACGATAAGCATTTATATGAAAGTTTGAGAGCTAAAATGGATAAAGGGAAGAGTGCCCCATCTCGGAAAGAGACTCCACCTCTCCCATCATCTCGTATTAGATCGTCGGCCAGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCCTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCAGAGGCTCATCGCAAGCTGAGAGATGCATCTAGAGGAAATGCAAATAGTCGACGGTTCTCACCAACAAAACGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGATGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGATGATGAGAGATCCATACCTGGGTCAGATGGGCCAACATTTGAAGATATCAAGGAAGTTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTTGGAATTGGGAGATCAAGATCTGGGCCTATCTATAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCTGACCGTCAGTATAAACTAGAGAACAAAATCACACATAAATATCTTAATGTTATTTGGGGAAATGAAGCTTCTGCCGCCAGGTGGCAGATGGCCATGGTTTCAGACTCTGCTCCACTCGAGGATGAATATAAACAGTGGGTTAAAGAGGTAGAGCGAACTGGCGGTCGGATGCTGAGCAAGCAGGATATATTGGAAAAGAAGGAAGCTATACAGAAAGTCAACAACTTTGTCTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGATAAAAAATCTGCCTCAGCAAGACCGTTAAATATTGCAGCTGAGAAGGACCGGTTGAGGAGAGAGATGGACGTAGCAGTAAGCAAGAACGATGAAGCTGAGGTGGAAAGGATCAAAACAAGGCTGCAGCAACTAGAGGCATCCAGGAGGTTGCAGATGAAAGATGCCAAAGCTATTCGGTTAGCTGAGATGAACAGGAAGAATAGGGTGGAAAACTTCAAAAATGCATCAGAACTAAGACCTCTGAAAGATTTGAAAGCTGGAGAGGCTGGTTACGATCCTTTCTCAAGGAGATGGACCAGGTCAAGGAATTATTATGTTTCCAATGCTGGTGAAGCCAATGGAGCTGCTGAAGCAGCTGGAAACAGTGACAATGTAACACCTGCATTGGAGAATACTAGAACTGAAGCTGGTGGTACTTCAGATGCTGGAATGGCAGCTACCGCAGCGGCCTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTTGATACTAATGCTCCTGTAGATGGAGGGACGGAGTCAAACTCGCTGCACAACTTCGAGCTGCCTATATCGTTGGCTATGCTTCAGAAATTTGGTGGTGCCCTCGGAGCGCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGACGTCAAGTCCCTGAGAATGATGGTAGGCGGCATGCACTGACACTTACTGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGA

Coding sequence (CDS)

ATGGCAGATTTAGAAAATTTACTTCTTGAAGCTGCTGGAAGAACTAATGCAGCAGGGAGAAATAGACACTCTCATCCACCATCGCGAAGGCAACGTGAAGGTTCATATTCTGATGCTGGAAGTGACTCTAGGGATGATGACTCAGATGATGATCGTGGTTATGCAAGCAGGAAGCCCTCTGGATCTCAGGTTCCTCTGAAGAAAAGGTTAGATCCTACTGAAAGGGATGATGATGGAGGCAGCCAAGAGGAAGGGGAAGACGAAGATGTTGGTTCAGAACGTGAGGGTGACAGCAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGATAGGCGCAAGCTTGCTGGTATGTCTGAACTTCAAAGAGAGATGATTCTGTCAGACAGAGCATCTAAGAAGAACGATAAGCATTTATATGAAAGTTTGAGAGCTAAAATGGATAAAGGGAAGAGTGCCCCATCTCGGAAAGAGACTCCACCTCTCCCATCATCTCGTATTAGATCGTCGGCCAGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCCTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCAGAGGCTCATCGCAAGCTGAGAGATGCATCTAGAGGAAATGCAAATAGTCGACGGTTCTCACCAACAAAACGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGATGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGATGATGAGAGATCCATACCTGGGTCAGATGGGCCAACATTTGAAGATATCAAGGAAGTTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTTGGAATTGGGAGATCAAGATCTGGGCCTATCTATAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCTGACCGTCAGTATAAACTAGAGAACAAAATCACACATAAATATCTTAATGTTATTTGGGGAAATGAAGCTTCTGCCGCCAGGTGGCAGATGGCCATGGTTTCAGACTCTGCTCCACTCGAGGATGAATATAAACAGTGGGTTAAAGAGGTAGAGCGAACTGGCGGTCGGATGCTGAGCAAGCAGGATATATTGGAAAAGAAGGAAGCTATACAGAAAGTCAACAACTTTGTCTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGATAAAAAATCTGCCTCAGCAAGACCGTTAAATATTGCAGCTGAGAAGGACCGGTTGAGGAGAGAGATGGACGTAGCAGTAAGCAAGAACGATGAAGCTGAGGTGGAAAGGATCAAAACAAGGCTGCAGCAACTAGAGGCATCCAGGAGGTTGCAGATGAAAGATGCCAAAGCTATTCGGTTAGCTGAGATGAACAGGAAGAATAGGGTGGAAAACTTCAAAAATGCATCAGAACTAAGACCTCTGAAAGATTTGAAAGCTGGAGAGGCTGGTTACGATCCTTTCTCAAGGAGATGGACCAGGTCAAGGAATTATTATGTTTCCAATGCTGGTGAAGCCAATGGAGCTGCTGAAGCAGCTGGAAACAGTGACAATGTAACACCTGCATTGGAGAATACTAGAACTGAAGCTGGTGGTACTTCAGATGCTGGAATGGCAGCTACCGCAGCGGCCTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTTGATACTAATGCTCCTGTAGATGGAGGGACGGAGTCAAACTCGCTGCACAACTTCGAGCTGCCTATATCGTTGGCTATGCTTCAGAAATTTGGTGGTGCCCTCGGAGCGCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGACGTCAAGTCCCTGAGAATGATGGTAGGCGGCATGCACTGACACTTACTGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGA

Protein sequence

MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRLAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL*

Homology

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BLAST of CsGy4G004815 vs. ExPASy Swiss-Prot
Match: Q9C950 (Protein RTF1 homolog OS=Arabidopsis thaliana OX=3702 GN=VIP5 PE=1 SV=1)

HSP 1 Score: 813.5 bits (2100), Expect = 1.7e-234
Identity = 466/663 (70.29%), Postives = 543/663 (81.90%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           M DLENLLLEAAGRTN+AGR+R  HPPS R+REGSYSD  SDSR DDSD+DRGYASRKPS
Sbjct: 1   MGDLENLLLEAAGRTNSAGRSR--HPPSSRRREGSYSDGSSDSR-DDSDEDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRL+  ER +D  ++ EG   D  S+REGDSS+ESD GDDLYK+++DR+KLAG
Sbjct: 61  GSQVPLKKRLE-AER-EDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           M+E QREMILS+RA KK DK+  E LR+K +  K+  S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + SR FS TKRKP  + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           S+SR QSDDEGS  +GGM+DSDD+R    SD PTFED+KEVTIRRSKLAKWLMEPFFEEL
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAM+SD  PLE+EY+QW++EVERT GRM +KQDI EKKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSAS RP+N+AAEKDRLR+E+++A SKNDEA VERIK++++QL+ASR  +  D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480

Query: 481 LAEMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY-VSNAGEANGAAE 540
           LAEMN+KNR ENFKNASE++ +   LKAGEAGYDPFSRRWTRS NYY   N G+     E
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540

Query: 541 AAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
           AA     V  A+E    +AG    AG+ AT AALEAAA AGKL+DT AP+  G E N LH
Sbjct: 541 AA-----VAAAVETNGADAG----AGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLH 600

Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
           NFEL +SL  LQK+GG  G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRRR
Sbjct: 601 NFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRR 643

[Close]

BLAST of CsGy4G004815 vs. ExPASy Swiss-Prot
Match: Q92541 (RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens OX=9606 GN=RTF1 PE=1 SV=4)

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-21
Identity = 173/664 (26.05%), Postives = 287/664 (43.22%), Query Frame = 0


Query: 39  AGSDSRDDDSDDDRGYASRKPS--------GSQVPLKKRLDPT----ERDDDGGSQ---- 98
           A SDS   DSDD+  + S K            +  +KK+ + T      D D  ++    
Sbjct: 91  ASSDSETSDSDDEWTFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAP 150

Query: 99  EEGEDEDVGSEREGDSSDESD----------VGDDLYKDDDDRRKLAGMSELQREMILSD 158
           EEGE  D  S     SSD              G+DL  D++DR +L  M+E +RE  L +
Sbjct: 151 EEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFN 210

Query: 159 RASK----KNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALN 218
           R  K    K    + + L+    K K    +K+       ++     S   +  K     
Sbjct: 211 RIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK----- 270

Query: 219 ELRAKRLKQQD--PEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQS 278
           E R+KR ++ D   +A  +L+       N       K++P     + S  + E E    S
Sbjct: 271 ERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSS 330

Query: 279 DDEGSTGDGGMIDSDDER-SIPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGC 338
           +    +      D ++E+  IP    P    E++  V + R KL +W   PFF + + GC
Sbjct: 331 EKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGC 390

Query: 339 FVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAM 398
           FVR+GIG   S P+YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  
Sbjct: 391 FVRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEF 450

Query: 399 VSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKK 458
           VS+    E E+ +W KE   + G  L   D + KKE +I++  N+ ++   +++++++K+
Sbjct: 451 VSNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKE 510

Query: 459 SASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAI 518
                P N A +K +L +E  +A    D+ + ++I+ +L +L    EA  R + K+  AI
Sbjct: 511 RFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI 570

Query: 519 RLAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 578
             + +N++NR  N   + +    +         DPF+RR  + +   VSN+ +   A +A
Sbjct: 571 --SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQA 630

Query: 579 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSL 638
           A        A  N +  +G   D       A  E + G GK  D N  +  D   +   +
Sbjct: 631 A------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKV 690

Query: 639 HNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRR 661
           H+F++ I L +      AL              A   +  P  DG     +L + DYK+R
Sbjct: 691 HDFDVKIDLQVPSSESKAL--------------AITSKAPPAKDGAPRR-SLNLEDYKKR 710

[Close]

BLAST of CsGy4G004815 vs. ExPASy Swiss-Prot
Match: A2AQ19 (RNA polymerase-associated protein RTF1 homolog OS=Mus musculus OX=10090 GN=Rtf1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.9e-21
Identity = 171/664 (25.75%), Postives = 291/664 (43.83%), Query Frame = 0


Query: 39  AGSDSRDDDSDDDRGYAS--RKPSGSQVPLKKR------------LDPTERDD--DGGSQ 98
           A SDS   DSDD+  + S   K  G    ++K+               ++RD   +  + 
Sbjct: 96  ASSDSETSDSDDEWTFGSNKNKKKGKTRKVEKKGAMKKQANKAASSGSSDRDSSAESSAP 155

Query: 99  EEGEDED-----VGSEREGDSSDESD-----VGDDLYKDDDDRRKLAGMSELQREMILSD 158
           EEGE  D       S  + DSS E +      G+DL  D++DR +L  M+E +RE  L +
Sbjct: 156 EEGEVSDSESSSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFN 215

Query: 159 RASK----KNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALN 218
           R  K    K    + + L+    K K    +K+       ++     S   +  K     
Sbjct: 216 RIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK----- 275

Query: 219 ELRAKRLKQQD--PEAHRKLRDASRGNANSRRFSPTKRKPF-TAPSLSSSSQSESESRFQ 278
           E R+KR ++ D   +A  +L+       N       K++P  T+   S   + E + +  
Sbjct: 276 ERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEDDDKSS 335

Query: 279 SDDEGSTGDGGMIDSDDERSIPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGC 338
              + S+      + +++  IP    P    E++  V + R KL +W   PFF + + GC
Sbjct: 336 EKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGC 395

Query: 339 FVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAM 398
           FVR+GIG   S P+YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  
Sbjct: 396 FVRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEF 455

Query: 399 VSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKK 458
           VS+    E E+ +W KE   + G  L   D + KKE +I++  N+ ++   +++++++K+
Sbjct: 456 VSNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKE 515

Query: 459 SASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAI 518
                P N A +K +L +E  +A    D+ + ++I+ +L +L    EA  R + K+  AI
Sbjct: 516 RFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI 575

Query: 519 RLAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 578
             + +N++NR  N   + +    +         DPF+RR  + +   VSN+ +   A +A
Sbjct: 576 --SYINQRNREWNIVESEKALVAESHNMRNQQMDPFTRR--QCKPTIVSNSRDP--AVQA 635

Query: 579 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPV--DGGTESNSL 638
           A        A  N +  +G   D       A  E + G GK  D N+    D   +   +
Sbjct: 636 A------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKTASDLSEDLFKV 695

Query: 639 HNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRR 661
           H+F++ I L +      AL              A   +  P  DG     +L + DYK+R
Sbjct: 696 HDFDVKIDLQVPSSESKAL--------------AITSKAPPAKDGAPRR-SLNLEDYKKR 715

[Close]

BLAST of CsGy4G004815 vs. ExPASy Swiss-Prot
Match: Q5RAD5 (RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii OX=9601 GN=RTF1 PE=2 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 4.5e-17
Identity = 165/651 (25.35%), Postives = 283/651 (43.47%), Query Frame = 0


Query: 7   LLLEAAGRTNAAGRNRHSHPPSRRQREGSYSD----------AGSDSRDDDSDDDRGYAS 66
           +++++    + +  N     PS  +R+ S S+          A SDS   DSDD+  + S
Sbjct: 44  VVIDSDTEDSGSDENLDQELPSLAKRKRSDSEEKEPPVSQPAASSDSETSDSDDEWTFGS 103

Query: 67  RKPS--------GSQVPLKKRLDPT----ERDDDGGSQ----EEGEDEDVGSEREGDSSD 126
            K            +  +KK+ + T      D D  ++    EEGE  D  S     SSD
Sbjct: 104 NKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSD 163

Query: 127 ESD----------VGDDLYKDDDDRRKLAGMSELQREMILSDRASK----KNDKHLYESL 186
                         G+DL  D++DR +L  M+E +RE  L +R  K    K    + + L
Sbjct: 164 SDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKL 223

Query: 187 RAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQD--PEAHR 246
           +    K K    +K+       ++     S   +  K     E R+KR ++ D   +A  
Sbjct: 224 KTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----ERRSKRDEKLDKKSQAME 283

Query: 247 KLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDER 306
           +L+       N       K++P     + S  + E E    S+    +      D ++E+
Sbjct: 284 ELKAEREKRKNRTVELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEK 343

Query: 307 -SIPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLC 366
             IP    P    E++  V + R KL +W   PFF + + GCFVR+GIG   S P+YR+ 
Sbjct: 344 EEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVA 403

Query: 367 LVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMVSDSAPLEDEYKQWVKEV 426
            +  V   E  + Y+L    T+K L +  GN+    R  +  VS+    E E+ +W KE 
Sbjct: 404 EITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKW-KEA 463

Query: 427 ERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKKSASARPLNIAAEKDRLRR 486
             + G  L   D + KKE +I++  N+ ++   +++++++K+     P N A +K +L +
Sbjct: 464 MFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLK 523

Query: 487 EMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAIRLAEMNRKNRVENFKNAS 546
           E  +A    D+ + ++I+ +L +L    EA  R + K+  AI  + +N++NR  N   + 
Sbjct: 524 EKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVESE 583

Query: 547 ELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAGNSDNVTPALENTRTEA 606
           +    +         DPF+RR  + +   VSN+ +   A +AA        A  N +  +
Sbjct: 584 KALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQAA------ILAQLNAKYGS 643

[Close]

BLAST of CsGy4G004815 vs. ExPASy Swiss-Prot
Match: G5EBY0 (RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans OX=6239 GN=rtfo-1 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.1e-14
Identity = 146/586 (24.91%), Postives = 256/586 (43.69%), Query Frame = 0


Query: 45  DDDSDDDRGYASRKPSGSQVPLKKRLDPTERDDDGGSQE----EGEDEDVGSEREGDSSD 104
           D DSD D G    KP  +        D +  D D    +    + +       R   SSD
Sbjct: 22  DSDSDSDAGPKPGKPLST--------DSSASDSDAEKPQAKPAKKKTLTKRKRRATGSSD 81

Query: 105 ESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRK 164
           +  V DDL+ D +D+ +   ++EL++E  + +R   + +    E +  ++ K     S K
Sbjct: 82  DDQVDDDLFADKEDKARWKKLTELEKEQEIFERMEARENAIAREEIAQQLAKKAKKSSEK 141

Query: 165 ETPPLPSSRIRSSARSA--DRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRR 224
                   ++ S    A   +  A  D+ +E+ A   +  D     K ++A     N R+
Sbjct: 142 GVKTEKRRKMNSGGSDAGSPKRKASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKRK 201

Query: 225 FSPTKRKP---------FTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDERSIPGS 284
               K            F A S SSSS S SES   S     +    + + D    I   
Sbjct: 202 EIEKKNAKNEALSIDAVFGANSGSSSSSSSSESSRSSSSSRESSPERVSEKD---KIVKK 261

Query: 285 DGPTFEDIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGR-SRSGPIYRLCLVRNVDA 344
           D     +++   + R KL+  +  PFF+  +VGC+VR+G G+ S SG  YR+  +  V+ 
Sbjct: 262 DVDGLSELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGVE- 321

Query: 345 TEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMVSDSAPLEDEYKQWVKEVERTGGRM 404
            E ++ Y+LE K T+K +     N  S   ++M  VS++   + E+ +W+   +R G   
Sbjct: 322 -ESNKVYELEGKKTNKIIKC--QNGGSERPFRMQFVSNADFEQIEFDEWLLACKRHGN-- 381

Query: 405 LSKQDILE-KKEAIQKVNNFVYSAATVKQMLQDKKSASARPLNIAAEKDRLRREMDVAVS 464
           L   DI++ KK+ I+K  N  YS   V  M+++K      P N A  K    ++ ++A  
Sbjct: 382 LPTVDIMDKKKQDIEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQQ 441

Query: 465 KNDEAEVERIKTRLQQLE-ASRRLQMKDAKAI-RLAEMNRKNRVENFKNASELRPLKDLK 524
           + D  E E+I+T++ ++E  +  L+ + +K+I  +A +N +NR    K+      LK  +
Sbjct: 442 RGDIREAEQIQTKIDEIERQADELEKERSKSISAIAFINHRNR-SKIKDQVLSGQLKIEE 501

Query: 525 AGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAGNSDNVTPALENTRTEAGGTSDAGMA 584
             +   DPF+R+    R     +    +G   A+ ++ N+              SD G  
Sbjct: 502 NSQD--DPFTRKKGGMR-VVSGSKSRLDGTLSASSSTTNL--------------SDGGKD 561

Query: 585 ATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAMLQKF 612
            +++  +           +  +   T+ +SLH+F+L I L  L+ F
Sbjct: 562 KSSSLAKPTQ-----PPPSTQIKKKTDISSLHDFDLDIDLGKLKDF 567

[Close]

BLAST of CsGy4G004815 vs. NCBI nr
Match: XP_004149150.1 (protein RTF1 homolog [Cucumis sativus] >XP_011653135.1 protein RTF1 homolog [Cucumis sativus] >KGN53247.1 hypothetical protein Csa_015135 [Cucumis sativus])

HSP 1 Score: 1220 bits (3157), Expect = 0.0
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CsGy4G004815 vs. NCBI nr
Match: XP_008453742.1 (PREDICTED: protein RTF1 homolog [Cucumis melo] >XP_008453743.1 PREDICTED: protein RTF1 homolog [Cucumis melo] >KAA0044744.1 protein RTF1-like protein [Cucumis melo var. makuwa] >TYK16718.1 protein RTF1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1190 bits (3079), Expect = 0.0
Identity = 642/660 (97.27%), Postives = 651/660 (98.64%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDDGGS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN+N+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERS+PGSDGPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQD+LEKK+AIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIK RLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSD VTPALE+TRT AGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CsGy4G004815 vs. NCBI nr
Match: XP_038894309.1 (protein RTF1 homolog [Benincasa hispida] >XP_038894317.1 protein RTF1 homolog [Benincasa hispida])

HSP 1 Score: 1188 bits (3074), Expect = 0.0
Identity = 640/660 (96.97%), Postives = 655/660 (99.24%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDD GSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDVGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRK+TPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKDTPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNAN+RRFSPTKRKP TAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPSTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQS+DEGSTGDGGMIDSDDERS+PGSDGPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVE+TGGRMLSKQDIL+KKEAIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVEQTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVA+SKNDEAEVERIK RLQQL+ASR+LQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLDASRKLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRP+KDLKAGEAGYDPFSRRWTRSRNYYVSNAGEAN AAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANEAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDNVTPALE+TRT +GGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALESTRTGSGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CsGy4G004815 vs. NCBI nr
Match: XP_023552862.1 (protein RTF1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1135 bits (2935), Expect = 0.0
Identity = 609/660 (92.27%), Postives = 639/660 (96.82%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT ++GRNRHSHPPSRRQREGSYSDAGSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKSSGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLR+KMDKGK+APSRKE PPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRD SRGNAN+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDER++PGS+GPTF+DIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQK NNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSAS+RPLNIAAEKDRLR +MDVA+SKN+EAEVERIK +L+QL+ASRR QMKDAKAIRL
Sbjct: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           +EMNRKNRVENFKNASELRP KDLKAGEAGYDPFSRRWTRSRNYYVSNAG+ +GAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           N+DN+TPALE+T T   G+ +AG+AATAAALEAAAGAGKLVDTNAPVDGGTESN LHNFE
Sbjct: 541 NNDNITPALESTGT---GSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISL +LQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CsGy4G004815 vs. NCBI nr
Match: KAG7015346.1 (Protein RTF1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1133 bits (2931), Expect = 0.0
Identity = 610/660 (92.42%), Postives = 637/660 (96.52%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT A+GRNRHSHPPSRRQREGSYSDAGSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLR+KMDKGK+APSRKE PP PSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPPPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRD SRGNAN+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDER++PGS+GPTF+DIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQK NNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSAS+RPLNIAAEKDRLR +MDVA+SKN+EAEVERIK +L+QL+ASRR QMKDAKAIRL
Sbjct: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           +EMNRKNRVENFKNASELRP KDLKAGEAGYDPFSRRWTRSRNYYVSNAG+ +GAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDN+TPA E T T   G+ +AG+AATAAALEAAAGAGKLVDTNAPVDGGTESN LHNFE
Sbjct: 541 NSDNITPASETTGT---GSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLA+LQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CsGy4G004815 vs. ExPASy TrEMBL
Match: A0A0A0KXW1 (Plus3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038650 PE=4 SV=1)

HSP 1 Score: 1220 bits (3157), Expect = 0.0
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CsGy4G004815 vs. ExPASy TrEMBL
Match: A0A1S3BXS8 (protein RTF1 homolog OS=Cucumis melo OX=3656 GN=LOC103494388 PE=4 SV=1)

HSP 1 Score: 1190 bits (3079), Expect = 0.0
Identity = 642/660 (97.27%), Postives = 651/660 (98.64%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDDGGS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN+N+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERS+PGSDGPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQD+LEKK+AIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIK RLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSD VTPALE+TRT AGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CsGy4G004815 vs. ExPASy TrEMBL
Match: A0A5A7TNN4 (Protein RTF1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005550 PE=4 SV=1)

HSP 1 Score: 1190 bits (3079), Expect = 0.0
Identity = 642/660 (97.27%), Postives = 651/660 (98.64%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDDGGS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN+N+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERS+PGSDGPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQD+LEKK+AIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIK RLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSD VTPALE+TRT AGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CsGy4G004815 vs. ExPASy TrEMBL
Match: A0A6J1J9Q9 (protein RTF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482580 PE=4 SV=1)

HSP 1 Score: 1132 bits (2929), Expect = 0.0
Identity = 609/660 (92.27%), Postives = 637/660 (96.52%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT A+GRNRHSHPPSRRQREGSYSDAGSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLR+KMDKGK+APSRKE PPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRD SRGNAN+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDER++PGS+GPTF+DIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQK NNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSVPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KK AS+RPLNIAAEKDRLR +MDVA+SKN+EAEVERIK +L+QL+ASRR QMKDAKAIRL
Sbjct: 421 KKFASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           +EMNRKNRVENFKNASELRP KDLKAGEAGYDPFSRRWTRSRNYYVSNAG+ +GAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDN+TPA E+T T   G+ +AG+AATAAALEAAAGAGKLVDTNAPVDGGTESN LHNFE
Sbjct: 541 NSDNITPASESTGT---GSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISL +LQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CsGy4G004815 vs. ExPASy TrEMBL
Match: A0A6J1ENR7 (protein RTF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436021 PE=4 SV=1)

HSP 1 Score: 1132 bits (2927), Expect = 0.0
Identity = 609/660 (92.27%), Postives = 636/660 (96.36%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT A+GRNRHSHPPSRRQREGSYSDAGSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLR+KMDKGK+APSRKE PPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRD SRGNAN+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDER++PGS+GPTF+DIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQK NNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSAS+RPLNIAAEKDRLR +MDVA+SKN+EAEVERIK +L+QL+ASRR QMKDAKAIRL
Sbjct: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           +EMNRKNRVENFKNASELRP KDLKAGEAGYDPFSRRWTRSRNYYVSNAG+ +GAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDN+TPA   T T   G+ +AG+AATAAALEAAAGAGKLVDTNAPVDGGTESN LHNFE
Sbjct: 541 NSDNITPASVTTGT---GSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISL +LQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CsGy4G004815 vs. TAIR 10
Match: AT1G61040.1 (plus-3 domain-containing protein )

HSP 1 Score: 813.5 bits (2100), Expect = 1.2e-235
Identity = 466/663 (70.29%), Postives = 543/663 (81.90%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           M DLENLLLEAAGRTN+AGR+R  HPPS R+REGSYSD  SDSR DDSD+DRGYASRKPS
Sbjct: 1   MGDLENLLLEAAGRTNSAGRSR--HPPSSRRREGSYSDGSSDSR-DDSDEDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRL+  ER +D  ++ EG   D  S+REGDSS+ESD GDDLYK+++DR+KLAG
Sbjct: 61  GSQVPLKKRLE-AER-EDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           M+E QREMILS+RA KK DK+  E LR+K +  K+  S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + SR FS TKRKP  + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           S+SR QSDDEGS  +GGM+DSDD+R    SD PTFED+KEVTIRRSKLAKWLMEPFFEEL
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAM+SD  PLE+EY+QW++EVERT GRM +KQDI EKKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSAS RP+N+AAEKDRLR+E+++A SKNDEA VERIK++++QL+ASR  +  D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480

Query: 481 LAEMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY-VSNAGEANGAAE 540
           LAEMN+KNR ENFKNASE++ +   LKAGEAGYDPFSRRWTRS NYY   N G+     E
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540

Query: 541 AAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
           AA     V  A+E    +AG    AG+ AT AALEAAA AGKL+DT AP+  G E N LH
Sbjct: 541 AA-----VAAAVETNGADAG----AGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLH 600

Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
           NFEL +SL  LQK+GG  G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRRR
Sbjct: 601 NFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRR 643

The following BLAST results are available for this feature:

BLAST of CsGy4G004815 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C950	1.7e-234	70.29	Protein RTF1 homolog OS=Arabidopsis thaliana OX=3702 GN=VIP5 PE=1 SV=1	[more]
Q92541	1.3e-21	26.05	RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens OX=9606 GN=RTF1 P...	[more]
A2AQ19	3.9e-21	25.75	RNA polymerase-associated protein RTF1 homolog OS=Mus musculus OX=10090 GN=Rtf1 ...	[more]
Q5RAD5	4.5e-17	25.35	RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii OX=960...	[more]
G5EBY0	6.1e-14	24.91	RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans OX=6239...	[more]

BLAST of CsGy4G004815 vs. NCBI nr


Match Name	Identity	Description
XP_004149150.1	100.00	protein RTF1 homolog [Cucumis sativus] >XP_011653135.1 protein RTF1 homolog [Cuc...	[more]
XP_008453742.1	97.27	PREDICTED: protein RTF1 homolog [Cucumis melo] >XP_008453743.1 PREDICTED: protei...	[more]
XP_038894309.1	96.97	protein RTF1 homolog [Benincasa hispida] >XP_038894317.1 protein RTF1 homolog [B...	[more]
XP_023552862.1	92.27	protein RTF1 homolog [Cucurbita pepo subsp. pepo]	[more]
KAG7015346.1	92.42	Protein RTF1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsGy4G004815 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KXW1	100.00	Plus3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038650 PE=4 ...	[more]
A0A1S3BXS8	97.27	protein RTF1 homolog OS=Cucumis melo OX=3656 GN=LOC103494388 PE=4 SV=1	[more]
A0A5A7TNN4	97.27	Protein RTF1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1J9Q9	92.27	protein RTF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482580 PE=4 SV=1	[more]
A0A6J1ENR7	92.27	protein RTF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436021 PE=4 SV=1	[more]

BLAST of CsGy4G004815 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61040.1	1.2e-235	70.29	plus-3 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 435..467
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..158
None	No IPR available	PANTHER	PTHR13115	UNCHARACTERIZED	coord: 1..660
None	No IPR available	PANTHER	PTHR13115:SF15	PLUS-3 DOMAIN PROTEIN	coord: 1..660
IPR004343	Plus-3 domain	SMART	SM00719	rtf1	coord: 271..383 e-value: 1.5E-44 score: 164.0
IPR004343	Plus-3 domain	PFAM	PF03126	Plus-3	coord: 276..381 e-value: 1.4E-30 score: 106.0
IPR004343	Plus-3 domain	PROSITE	PS51360	PLUS3	coord: 271..406 score: 36.910328
IPR036128	Plus3-like superfamily	GENE3D	3.90.70.200		coord: 272..404 e-value: 3.6E-35 score: 122.7
IPR036128	Plus3-like superfamily	SUPERFAMILY	159042	Plus3-like	coord: 273..404

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G004815.1	CsGy4G004815.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016593	Cdc73/Paf1 complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:1990269	RNA polymerase II C-terminal domain phosphoserine binding