CsGy4G004555 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G004555
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 3049911 .. 3050135 (-)
RNA-Seq ExpressionCsGy4G004555
SyntenyCsGy4G004555
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCGGACTCGATTTTCAAAGAAATCCACCAGCATCAGACATTGTAGAGCATCGAGATGAATACGAGAAACAGAGCAAAACAAAGCGAAACCTGTATAGAAAAACAGAGCAGCCTCTTTTCAACGAACAACTCAAAAACTCAGCACGAAATCAAGAACCCACTACAGGAAAGCGTGTTTGTAAAGAAAAGGACAAGACACACAAAAGGGAATGTGCTTAA

mRNA sequence

ATGGCTTCCGGACTCGATTTTCAAAGAAATCCACCAGCATCAGACATTGTAGAGCATCGAGATGAATACGAGAAACAGAGCAAAACAAAGCGAAACCTGTATAGAAAAACAGAGCAGCCTCTTTTCAACGAACAACTCAAAAACTCAGCACGAAATCAAGAACCCACTACAGGAAAGCGTGTTTGTAAAGAAAAGGACAAGACACACAAAAGGGAATGTGCTTAA

Coding sequence (CDS)

ATGGCTTCCGGACTCGATTTTCAAAGAAATCCACCAGCATCAGACATTGTAGAGCATCGAGATGAATACGAGAAACAGAGCAAAACAAAGCGAAACCTGTATAGAAAAACAGAGCAGCCTCTTTTCAACGAACAACTCAAAAACTCAGCACGAAATCAAGAACCCACTACAGGAAAGCGTGTTTGTAAAGAAAAGGACAAGACACACAAAAGGGAATGTGCTTAA

Protein sequence

MASGLDFQRNPPASDIVEHRDEYEKQSKTKRNLYRKTEQPLFNEQLKNSARNQEPTTGKRVCKEKDKTHKRECA*
Homology
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BLAST of CsGy4G004555 vs. NCBI nr
Match: KAE8637161.1 (hypothetical protein CSA_004643, partial [Cucumis sativus] >KAE8649153.1 hypothetical protein Csa_014601, partial [Cucumis sativus])

HSP 1 Score: 119 bits (297), Expect = 2.50e-33
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MASGLDFQRNPPASDIVEHRDEYEKQSKTKRNLYRKTEQPLFNEQLKNSARNQEPTTGKR 60
          MASGLDFQRNPPASDIVEHRDEYEKQSKTKRNLYRKTEQPLFNEQLKNSARNQEPTTGKR
Sbjct: 1  MASGLDFQRNPPASDIVEHRDEYEKQSKTKRNLYRKTEQPLFNEQLKNSARNQEPTTGKR 60

The following BLAST results are available for this feature:
BLAST of CsGy4G004555 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy4G004555 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8637161.12.50e-33100.00hypothetical protein CSA_004643, partial [Cucumis sativus] >KAE8649153.1 hypothe... [more]
BLAST of CsGy4G004555 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy4G004555 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G004555.1CsGy4G004555.1mRNA