CsGy4G004500 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G004500
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein UPSTREAM OF FLC
Location	Gy14Chr4: 2982605 .. 2983636 (+)
RNA-Seq Expression	CsGy4G004500
Synteny	CsGy4G004500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTATTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGTATAAAAATGAAAAAGAGAAAGGAGGAAAAATAAAACAGGGAGAAAACGAAGGGTGTGAAGGTGAATTTTCTGTAATCTTTTTTCAATTCCTTACCTAACAGATCTCACCATTACTAGCCCATCACGCGTACGGAAACGGATGGAAGTTTGTGGATACTCATGATGCATGTTTTCTTCTGTACATCTCTAATTTTTCTTTCAATCCTTGCCTAATTACTATTCTCAGATCTTTGCTTTGTTAAATATCTTTATTCCTTCCTACACTTACATAGAATCTAAACCGAATACTCCCCTTATATAAACCCTCAATTGACACAATACATCCACACAAACAAACGCAAAAGCTTTAACATGACTTTCTTTGCCAAGTTTATCGTTCTTTTTTTCTTTTAGCTATTGCTTCTTCATCCCATGATCTAGAAGCGAGGCAATATAAGTTGGATGGCATTGCTTCCTCGTCCCATGATCTAGAAGCGAGGCAATATAAGTTGGATGGCATGGCATTCTCATGTTTGAATTCCTTGCTTAAAATTCGTACGTGCATCAAGGATGTTCGAGTAATATTTCGAAATGGCGGTAAATGGAAAGTAAGTCTCAACTGTTGCAATGCAATTAAGAGTATAGAGCGTGAGTGTTTGCCAGATTTGTTGAATCTCATGGGCTTCTCACCAAAGGAGGTCAGGATTATTGATGACCATTGCAATATTGGGACCAAGATCCACTAA

mRNA sequence

ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTATTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGTATAAAAATGAAAAAGAGAAAGGAGGAAAAATAAAACAGGGAGAAAACGAAGGGTGTGAAGCTATTGCTTCTTCATCCCATGATCTAGAAGCGAGGCAATATAAGTTGGATGGCATTGCTTCCTCGTCCCATGATCTAGAAGCGAGGCAATATAAGTTGGATGGCATGGCATTCTCATGTTTGAATTCCTTGCTTAAAATTCGTACGTGCATCAAGGATGTTCGAGTAATATTTCGAAATGGCGGTAAATGGAAAGTAAGTCTCAACTGTTGCAATGCAATTAAGAGTATAGAGCGTGAGTGTTTGCCAGATTTGTTGAATCTCATGGGCTTCTCACCAAAGGAGGTCAGGATTATTGATGACCATTGCAATATTGGGACCAAGATCCACTAA

Coding sequence (CDS)

ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTATTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGTATAAAAATGAAAAAGAGAAAGGAGGAAAAATAAAACAGGGAGAAAACGAAGGGTGTGAAGCTATTGCTTCTTCATCCCATGATCTAGAAGCGAGGCAATATAAGTTGGATGGCATTGCTTCCTCGTCCCATGATCTAGAAGCGAGGCAATATAAGTTGGATGGCATGGCATTCTCATGTTTGAATTCCTTGCTTAAAATTCGTACGTGCATCAAGGATGTTCGAGTAATATTTCGAAATGGCGGTAAATGGAAAGTAAGTCTCAACTGTTGCAATGCAATTAAGAGTATAGAGCGTGAGTGTTTGCCAGATTTGTTGAATCTCATGGGCTTCTCACCAAAGGAGGTCAGGATTATTGATGACCATTGCAATATTGGGACCAAGATCCACTAA

Protein sequence

MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKRYKNEKEKGGKIKQGENEGCEAIASSSHDLEARQYKLDGIASSSHDLEARQYKLDGMAFSCLNSLLKIRTCIKDVRVIFRNGGKWKVSLNCCNAIKSIERECLPDLLNLMGFSPKEVRIIDDHCNIGTKIH*

Homology

[Close]

BLAST of CsGy4G004500 vs. ExPASy Swiss-Prot
Match: Q8GY65 (Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-08
Identity = 38/88 (43.18%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 19  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTT 78
           P+  +   V YY+SRNGRL+ PHF+E+PL                  H  L L       
Sbjct: 14  PSRERIVPVVYYLSRNGRLDHPHFIEVPL----------------SSHNGLYL------K 73

Query: 79  DVLDRLAVLRGNAMPFLYSWSCKR-YKN 106
           DV++RL  LRGN M  LYSWS KR YKN
Sbjct: 74  DVINRLNDLRGNGMACLYSWSSKRTYKN 79

[Close]

BLAST of CsGy4G004500 vs. ExPASy Swiss-Prot
Match: Q9LX14 (Protein SOSEKI 2 OS=Arabidopsis thaliana OX=3702 GN=SOK2 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.4e-07
Identity = 38/104 (36.54%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 8   HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYY 67
           +HH+H    +     KK      QV YY++RNG LE PHF+E+        +S V     
Sbjct: 24  NHHQHDEELEEEVKTKKPIFRRVQVVYYLTRNGHLEHPHFIEV--------ISPV----- 83

Query: 68  FERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN 106
              +  L L       DV++RL +LRG  M   Y+WSCKR Y+N
Sbjct: 84  ---NQPLRL------RDVMNRLTILRGKCMTSQYAWSCKRSYRN 105

[Close]

BLAST of CsGy4G004500 vs. ExPASy Swiss-Prot
Match: Q8GYT8 (Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = 0


Query: 22  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVL 81
           +KK Q+ YY+S+N +LE PHF+E+        +S     Y                 DV+
Sbjct: 31  IKKVQIVYYLSKNRQLEHPHFMEV-------LISSPNGLY---------------LRDVI 90

Query: 82  DRLAVLRGNAMPFLYSWSCKR-YKN 106
           +RL VLRG  M  +YSWS KR Y+N
Sbjct: 91  ERLNVLRGRGMASMYSWSSKRSYRN 93

[Close]

BLAST of CsGy4G004500 vs. ExPASy Swiss-Prot
Match: Q9FJF5 (Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 36/91 (39.56%), Postives = 44/91 (48.35%), Query Frame = 0


Query: 16  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFN 75
           R  P   +K  V YY+ RNG+L+ PHF+E+ L                  H  L L    
Sbjct: 38  RLKPVVNRKVPVVYYLCRNGQLDHPHFIEVTL----------------SSHDGLYL---- 97

Query: 76  VTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN 106
              DV++RL  LRG  M  LYSWS KR YKN
Sbjct: 98  --KDVINRLNDLRGKGMASLYSWSSKRSYKN 106

[Close]

BLAST of CsGy4G004500 vs. ExPASy Swiss-Prot
Match: Q9SRD8 (Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana OX=3702 GN=EC1.1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.8e-06
Identity = 22/73 (30.14%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 154 KLDGMAFSCLNSLLKIRTCIKDVRVIFRNGGKWKVSLNCCNAIKSIERECLPDLLNLMGF 213
           KLD     C +SL++++ C  ++ + F NG  + +   CC+AI++I R+C P ++ ++GF
Sbjct: 49  KLDEDTGYCWDSLMQLQHCSGELILFFLNGETY-IGPGCCSAIRTIGRKCWPTMIGVLGF 108

Query: 214 SPKEVRIIDDHCN 227
           + +E  ++  +C+
Sbjct: 109 TAQEGDMLQGYCD 120

[Close]

BLAST of CsGy4G004500 vs. NCBI nr
Match: XP_031745649.1 (uncharacterized protein LOC116406091 isoform X1 [Cucumis sativus] >XP_031745650.1 uncharacterized protein LOC116406091 isoform X1 [Cucumis sativus] >XP_031745653.1 uncharacterized protein LOC116406092 isoform X1 [Cucumis sativus] >XP_031745654.1 uncharacterized protein LOC116406092 isoform X1 [Cucumis sativus] >XP_031745701.1 uncharacterized protein LOC116406148 isoform X1 [Cucumis sativus] >XP_031745702.1 uncharacterized protein LOC116406148 isoform X1 [Cucumis sativus])

HSP 1 Score: 167 bits (424), Expect = 9.94e-48
Identity = 88/121 (72.73%), Postives = 89/121 (73.55%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFF 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K    
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK---- 60

Query: 61  YYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKRYKNEKEKGGKIKQGENEG 120
                             DVLDRLAVLRGNAMPFLYSWSCKRYKNEKEKGGKIK G +  
Sbjct: 61  ------------------DVLDRLAVLRGNAMPFLYSWSCKRYKNEKEKGGKIKTGGSLF 99

[Close]

BLAST of CsGy4G004500 vs. NCBI nr
Match: XP_031739670.1 (protein UPSTREAM OF FLC isoform X1 [Cucumis sativus])

HSP 1 Score: 167 bits (424), Expect = 5.57e-46
Identity = 88/121 (72.73%), Postives = 89/121 (73.55%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFF 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K    
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK---- 60

Query: 61  YYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKRYKNEKEKGGKIKQGENEG 120
                             DVLDRLAVLRGNAMPFLYSWSCKRYKNEKEKGGKIK G +  
Sbjct: 61  ------------------DVLDRLAVLRGNAMPFLYSWSCKRYKNEKEKGGKIKTGGSLF 99

[Close]

BLAST of CsGy4G004500 vs. NCBI nr
Match: XP_031745651.1 (protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus] >XP_031745655.1 protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus] >XP_031745703.1 protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus])

HSP 1 Score: 142 bits (358), Expect = 2.82e-38
Identity = 76/106 (71.70%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFF 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K    
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK---- 60

Query: 61  YYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN 105
                             DVLDRLAVLRGNAMPFLYSWSCKR YK+
Sbjct: 61  ------------------DVLDRLAVLRGNAMPFLYSWSCKRNYKS 84

[Close]

BLAST of CsGy4G004500 vs. NCBI nr
Match: KAE8637152.1 (hypothetical protein CSA_004634 [Cucumis sativus] >KAE8637178.1 hypothetical protein CSA_018809 [Cucumis sativus])

HSP 1 Score: 140 bits (352), Expect = 2.00e-37
Identity = 73/101 (72.28%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFF 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K    
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK---- 60

Query: 61  YYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCK 101
                             DVLDRLAVLRGNAMPFLYSWSCK
Sbjct: 61  ------------------DVLDRLAVLRGNAMPFLYSWSCK 79

[Close]

BLAST of CsGy4G004500 vs. NCBI nr
Match: XP_011653119.2 (protein UPSTREAM OF FLC isoform X2 [Cucumis sativus])

HSP 1 Score: 142 bits (358), Expect = 1.37e-36
Identity = 76/106 (71.70%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFF 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K    
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK---- 60

Query: 61  YYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN 105
                             DVLDRLAVLRGNAMPFLYSWSCKR YK+
Sbjct: 61  ------------------DVLDRLAVLRGNAMPFLYSWSCKRNYKS 84

[Close]

BLAST of CsGy4G004500 vs. ExPASy TrEMBL
Match: A0A0A0KXS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G027920 PE=3 SV=1)

HSP 1 Score: 142 bits (358), Expect = 6.64e-37
Identity = 76/106 (71.70%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFF 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP      K    
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK---- 60

Query: 61  YYFERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN 105
                             DVLDRLAVLRGNAMPFLYSWSCKR YK+
Sbjct: 61  ------------------DVLDRLAVLRGNAMPFLYSWSCKRNYKS 84

[Close]

BLAST of CsGy4G004500 vs. ExPASy TrEMBL
Match: A0A5D3DGY6 (Egg cell-secreted protein 1.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold81220G00010 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 4.22e-25
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 150 ARQYKLDGMAFSCLNSLLKIRTCIKDVRVIFRNGGKWKVSLNCCNAIKSIERECLPDLLN 209
           A + KLDG AF CL SL ++  CI D+R IFRN  KWK+SLNCC+AIK+IE EC P+ LN
Sbjct: 19  AARIKLDG-AFDCLRSLPQLGKCIDDIRAIFRNRHKWKISLNCCHAIKNIEHECWPEYLN 78

Query: 210 LMGFSPKEVRIIDDHCNIG 228
           LMGF+ KE+ IID++C I 
Sbjct: 79  LMGFTAKEIGIIDENCKIN 96

[Close]

BLAST of CsGy4G004500 vs. ExPASy TrEMBL
Match: A0A6J1FUF7 (protein UPSTREAM OF FLC isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446977 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.28e-16
Identity = 46/85 (54.12%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 18  SPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVT 77
           +P PMKK QVFYY+SRNGRLEQPHFLEI LFP      K                     
Sbjct: 36  APPPMKKVQVFYYLSRNGRLEQPHFLEISLFPNQPLRLK--------------------- 95

Query: 78  TDVLDRLAVLRGNAMPFLYSWSCKR 102
            DV+DRL +LRG AM  LYSWSCKR
Sbjct: 96  -DVMDRLTLLRGKAMRSLYSWSCKR 98

[Close]

BLAST of CsGy4G004500 vs. ExPASy TrEMBL
Match: A0A5A7SXF0 (Protein UPSTREAM OF FLC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00080 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.65e-15
Identity = 42/49 (85.71%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 1  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFP 49
          MEEKDRDH  RHH  RDSPTPMKKA   YYISRNGRLEQPHFLEIPLFP
Sbjct: 1  MEEKDRDH--RHHCHRDSPTPMKKA---YYISRNGRLEQPHFLEIPLFP 44

[Close]

BLAST of CsGy4G004500 vs. ExPASy TrEMBL
Match: A0A6J1IY41 (protein UPSTREAM OF FLC isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480256 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.88e-14
Identity = 43/81 (53.09%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 22  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVL 81
           MKK QVFYY+SRNGRLEQPHF+EI LFP      K                      DV+
Sbjct: 1   MKKVQVFYYLSRNGRLEQPHFVEISLFPNQPLRLK----------------------DVM 59

Query: 82  DRLAVLRGNAMPFLYSWSCKR 102
           DRL VLRG AM  LY+WSCKR
Sbjct: 61  DRLTVLRGKAMRSLYAWSCKR 59

[Close]

BLAST of CsGy4G004500 vs. TAIR 10
Match: AT3G46110.2 (Domain of unknown function (DUF966) )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 38/88 (43.18%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 19  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTT 78
           P+  +   V YY+SRNGRL+ PHF+E+PL                  H  L L       
Sbjct: 14  PSRERIVPVVYYLSRNGRLDHPHFIEVPL----------------SSHNGLYL------K 73

Query: 79  DVLDRLAVLRGNAMPFLYSWSCKR-YKN 106
           DV++RL  LRGN M  LYSWS KR YKN
Sbjct: 74  DVINRLNDLRGNGMACLYSWSSKRTYKN 79

[Close]

BLAST of CsGy4G004500 vs. TAIR 10
Match: AT3G46110.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 38/88 (43.18%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 19  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTT 78
           P+  +   V YY+SRNGRL+ PHF+E+PL                  H  L L       
Sbjct: 14  PSRERIVPVVYYLSRNGRLDHPHFIEVPL----------------SSHNGLYL------K 73

Query: 79  DVLDRLAVLRGNAMPFLYSWSCKR-YKN 106
           DV++RL  LRGN M  LYSWS KR YKN
Sbjct: 74  DVINRLNDLRGNGMACLYSWSSKRTYKN 79

[Close]

BLAST of CsGy4G004500 vs. TAIR 10
Match: AT5G10150.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-08
Identity = 38/104 (36.54%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 8   HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYY 67
           +HH+H    +     KK      QV YY++RNG LE PHF+E+        +S V     
Sbjct: 24  NHHQHDEELEEEVKTKKPIFRRVQVVYYLTRNGHLEHPHFIEV--------ISPV----- 83

Query: 68  FERHVVLGLIVFNVTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN 106
              +  L L       DV++RL +LRG  M   Y+WSCKR Y+N
Sbjct: 84  ---NQPLRL------RDVMNRLTILRGKCMTSQYAWSCKRSYRN 105

[Close]

BLAST of CsGy4G004500 vs. TAIR 10
Match: AT2G28150.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 55.1 bits (131), Expect = 8.9e-08
Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = 0


Query: 22  MKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFNVTTDVL 81
           +KK Q+ YY+S+N +LE PHF+E+        +S     Y                 DV+
Sbjct: 31  IKKVQIVYYLSKNRQLEHPHFMEV-------LISSPNGLY---------------LRDVI 90

Query: 82  DRLAVLRGNAMPFLYSWSCKR-YKN 106
           +RL VLRG  M  +YSWS KR Y+N
Sbjct: 91  ERLNVLRGRGMASMYSWSSKRSYRN 93

[Close]

BLAST of CsGy4G004500 vs. TAIR 10
Match: AT5G59790.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07
Identity = 36/91 (39.56%), Postives = 44/91 (48.35%), Query Frame = 0


Query: 16  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPTTLFVSKVRFFYYFERHVVLGLIVFN 75
           R  P   +K  V YY+ RNG+L+ PHF+E+ L                  H  L L    
Sbjct: 38  RLKPVVNRKVPVVYYLCRNGQLDHPHFIEVTL----------------SSHDGLYL---- 97

Query: 76  VTTDVLDRLAVLRGNAMPFLYSWSCKR-YKN 106
              DV++RL  LRG  M  LYSWS KR YKN
Sbjct: 98  --KDVINRLNDLRGKGMASLYSWSSKRSYKN 106

The following BLAST results are available for this feature:

BLAST of CsGy4G004500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GY65	2.3e-08	43.18	Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1	[more]
Q9LX14	7.4e-07	36.54	Protein SOSEKI 2 OS=Arabidopsis thaliana OX=3702 GN=SOK2 PE=1 SV=1	[more]
Q8GYT8	1.3e-06	37.65	Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1	[more]
Q9FJF5	1.6e-06	39.56	Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1	[more]
Q9SRD8	4.8e-06	30.14	Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana OX=3702 GN=EC1.1 PE=2 SV=1	[more]

BLAST of CsGy4G004500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745649.1	9.94e-48	72.73	uncharacterized protein LOC116406091 isoform X1 [Cucumis sativus] >XP_031745650....	[more]
XP_031739670.1	5.57e-46	72.73	protein UPSTREAM OF FLC isoform X1 [Cucumis sativus]	[more]
XP_031745651.1	2.82e-38	71.70	protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus] >XP_031745655.1 protei...	[more]
KAE8637152.1	2.00e-37	72.28	hypothetical protein CSA_004634 [Cucumis sativus] >KAE8637178.1 hypothetical pro...	[more]
XP_011653119.2	1.37e-36	71.70	protein UPSTREAM OF FLC isoform X2 [Cucumis sativus]	[more]

BLAST of CsGy4G004500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXS9	6.64e-37	71.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G027920 PE=3 SV=1	[more]
A0A5D3DGY6	4.22e-25	60.76	Egg cell-secreted protein 1.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1FUF7	1.28e-16	54.12	protein UPSTREAM OF FLC isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446977...	[more]
A0A5A7SXF0	1.65e-15	85.71	Protein UPSTREAM OF FLC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1IY41	2.88e-14	53.09	protein UPSTREAM OF FLC isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480256 P...	[more]

BLAST of CsGy4G004500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46110.2	1.6e-09	43.18	Domain of unknown function (DUF966)	[more]
AT3G46110.1	1.6e-09	43.18	Domain of unknown function (DUF966)	[more]
AT5G10150.1	5.2e-08	36.54	Domain of unknown function (DUF966)	[more]
AT2G28150.1	8.9e-08	37.65	Domain of unknown function (DUF966)	[more]
AT5G59790.1	1.2e-07	39.56	Domain of unknown function (DUF966)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010369	Protein SOSEKI	PFAM	PF06136	DUF966	coord: 26..105 e-value: 3.9E-18 score: 66.3
IPR010369	Protein SOSEKI	PANTHER	PTHR31083	UPSTREAM OF FLC PROTEIN (DUF966)	coord: 12..105
IPR008502	Prolamin-like domain	PFAM	PF05617	Prolamin_like	coord: 162..225 e-value: 4.0E-9 score: 36.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31083:SF18	PROTEIN UPSTREAM OF FLC	coord: 12..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G004500.2	CsGy4G004500.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051258	protein polymerization
cellular_component	GO:0005886	plasma membrane