CsGy4G004280 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G004280
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionlate embryogenesis abundant protein At5g17165-like
LocationGy14Chr4: 2797742 .. 2804534 (-)
RNA-Seq ExpressionCsGy4G004280
SyntenyCsGy4G004280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAGAAGGCAATTTGCGTTGCGGATGAGAAAGGTTCTCTAGTTTTGTCGTCTTTTGGGGTACGACGACGTATAGGTGGATTATAAATACGAAATTACCGCTAACGATTGGAGATCAGAAGCGATTAATCGCCATTTTCTTTCTTCTTCTTCTTCTTCATCATCTCTCTCTCTCTCTCTGCTTAGGTGCAGTTTTTTCTGGTTCTTTGTTTTTTCTCCATCTCTCTCTCTCTTTAAGCCTGAATTGTATGGCCGCTAATTCGAGGAGCGTAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGACCTGTGATCCACTTCGTAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGTTCTTCTTCTTCTTTTTCTTTGATTTCTTCTTGTGCGAATGTTCATGAAGTTGTAGTGCTGTTAATTTGTTTGTGCTATTCTCTGGTAAATAGCTTTATTGCATTCTTGTTGCGAAACTTTCTTTGAAAAGTTGTTCTGAATGTTGTTGCATTTCTTCTTCATCACGCCGATTGCCTTTTTTTTAACAACTTCTCACTGACGCATACTTAAGCTGAACGTCTTCTTCACGACGTAACTTTTAGGTCCTCCCTAGACTAGAATCTCTTCGATTGATCGTATTCTGATACTCGGTTCCTTCTGATCTTGGTCGTTTCTTCTACTAATAAGGTTTTAGGATTCTAATTTCCCTTCGATTTTCCCGCCATATCCAATATTACGCCCAATTTGCGTAGAAATTGGAAATGATGCTTTCCTCACTCTGCCTTTTTCCTCCGCTCTTCCTCGTCGTTTTTTTATTCAAATTTGTTAGACTAGTTTTTACGTTCACGTTGTTGATTTGTCAATTCTGCTTGCTGTGTGGAAGAAGATTTGGAATTAGAGAGTGCGAGTTCTTATTCCTTTGAAACTCAGATGAAATTTGGGGAAGATGCGTAGGCGGAGTAAATCCGGGGTTCGAAACTCGAAAGTTACTCTATCCAAAATCGTGAATATAAAAATTGAATAACTACTTTATCTTTTTTCTTCTTATTATTAGTAAACTAATTTATCTTTTAATATAATAAACAATTCATCCATTATAAGATTTATTACTTAATTTTTTCCAACAAAAAGGTCAGTCAATATTATTTTTTTAAAAAAAGTGGATATTATGAGCTGTTATACATTTTATTTGTTGGTATCATTTTTAGAATTTAGCTTATTTACTAATTTTTTACTTTACATCTATGCTGAGATAATAATCCAGGGTAGAGTTAAACATAGTCGTTTTAATCTTAATTATCTCCTCTTCAAGCATTTTTCAACTTTATGCAAACCTTGAAATTGCATATGGCGTCAGACATAGTAAATTAGTGGGGACAAGACTTTATTGGTGCAATATCTATGGTATTTAATACTTGTAGCATTACAATTATTTTAGTTTGATCAAGCGAAAAACTAAATTATGAAGATTTTAACACTTAATTAATTGTAATTTAGTATGGTCCCAAAGTAATACCTAATATTAAGATTAACACAGTGTTTTAAATTTTTTATTTGTTTTTGTAATTTGCCTAGGAATTCAATTGGAGGGGAGATAGATTTTTCAAAAATATAAAAATAAGAAAATAGTTCCCAGTGAAAACATGAATTTTCTTACAAAATATTTAATAGAATATAAGAACTTATCACGTTGTGCCTAATTTATAAATATATACTTCCAAAGGAATAGAAGAGTGCTGACAAATATATTGATTAGGTGTGAAAATATTTAATGTAAAGATTAGTTCTTAAAAAAATTAATATATAGATTCGTTGACTTCAGTTCGCTAAAATTATTTCCATTCCACAGTTCTTTAATAAATGTTTTAAAACTGGTCATTGAGTAGAAAACTCACAAAAAAAATCAATGGAAAGTTGTGGGTATTTGAACCTCAGTTCTCATTTCAAGTTATCCACTTACACTATTCTATTCTAAAAACTTTTCCTCTTATCTAGAAAAGCAAATAATCATCCCAGGAGGATTTTTCTTTCTATGGCTCTTCTCATGGAACTTATATATAAATAATAGAAATTGATTAAAATAATTTTATCTGGTTATTCTAGGTTTTGTTATATTTAAAAATATTTTTAATTATTTAGGTTTTGTTATATTTGAAAATATTTTTAATTATTTTAATATTTAAAGGATGAAATGTTTTTTTGTAAGTTGAAATTATATTTTTTTTATCTCAATGAGGTCTAACTTCCTATTGGTTTCCGAATTGTTTTTGGTTTTGTTTCATTTCGATATCCTTACTTCAAGTGCTACAATTTTGTCATTATATTTTGAATTTATATTTTTAACTTTGGTTTTTTATTAGATAAGTATATTTTGTTCTTAATATTAATACTTATTGTTTGATTTTGAAGAATTATAATAATTAATTGAGCTCTATGAACGTGGTAGTTTTAAATTTGAAATTGTACTTTTAAATTATTTGGAATTAACTGATAATATATATTGTTTATAGAAAGTCAAGGTTCAAAAGATTATAGAAAAGAAAACTTTTATAACTCATGATTAAGTTGAAACTGTATCCAAATCTTAAAATAAGATAGAAACTAAAAGACTAAACAAAATATAATTCATAGTTCATAATGACTCAAAAAAGTGTTATTTTGAAATTTAGAAATGAAATATTTAGATTTAGAAATAAAAACTTAAAAAACTAAAACTGTACCATTTTCCTATGCAAAAGAGATGAGTAGGGTAGGGTGTTGGTGTAAGCATCTTTAGTGCCCCAATTTGAAGCTATGAAAGCTGAAAAAGGAAACTCCCAAGTCTAAAGCCTAAAGATATTAGAGTGAGTGGATCCACAGTTAATGCTAAGCGTCAATGATGTGATTTGGCCTTATGCTCATCCACTCATTTTTAGCTGACATTTTGATTTCAGTATTTTTTTTCAATTCTTTCCTCGAATTTCTGTCTCAATCCGACTCTACTTTGGCCGTGGATTGTGACTAAATGGTCTGAATAATAAATACCATAGAATTTGGGTCGGTAAGAGAGGGGACTAAGTAGGGATTTCTCATCTCCATCTCATCCTACGCGTCTTTTCTTAATGCTCACTTTGTCAAATTAAAAACAATATTTATTTGGTCATTAGTTCATCAGCCTTTGCTAACACTCCAAGGTTTAAACTAACGATCTAGATCAAAATATCAAACGTAAGTTTTGATAGAATGTTTATGTTGATAGATTTTTCAATTATTATTAATATAAAAGATCTACAAATTTACAAAAAAAAAAATAGCCATCCTTGTAAAATAGTTTTGAGCTTTGTTTATTAGGCGCCATTGCACATGGGTGATAGTTTATTAATATTTTTGTCATAGTGCATTGATTTATCTATGATATACTAGAAATCTCCATAAAAGAATGTCAAGTTGGGAATAAGTTGTTGACATGCAAATAAAGATTTAACACCAACCAAAGCAACCACTACCATCCAACTAACTTTATGTGAATGTCTAATTTTAAAATGTATTGTAATTAATATATATTTGAAGTTGTTTTCCTTTGTGATTCAAATTTTAAAAGTGATGGAAAAAAGTTTTTTTCCATAACCCTATCATCTTGCTTTCATTTACATTCACACAATATATTATAAATATTTATTTTCTTAAGAAAATTTACAGTTTTCTAATATTAATCTAGAGTAGTTTTATATTACATTTCTTTTAATGAAAAATCTATTTGTTGTTTACACTCAACCACACTTGGTTTGAAAATCCCACAAAATCTTATGACATTATTAGTGATTTCTTTCCATTTTTAGAAAATTTCCTTTTCTAGTAATTTTAATTCCCTCTTAAACATATTTTCTTAGGACAAAAAAGTATTTACGAATAGAGTACAATGCGGATGTCCATCATTGTCTACTCTCAATACATAATGATAATTGAATTTTTCCTTTCATTTCGCTGTATTAGAAACAAAACTGAATTTGATTTTATGAACACTACATCTACAAATATTGAATGAAATTTTCGATTATAGTCTTCCTTTAATTTGGAAACCAAAATAATTTCAGAATTTTTCAAAATATATTAAAAGTGCTCGACATTCAAACGTGGAACACGTGTCAAATGAAATTTGTTTCTATCCTTTGATGGCCTACGCCTAGCTGGCTCTTATCTTACTTTTCCCATAAGATCCGATTGTTGATCGCCAGATACTTGGAATTGGAAACTTTATGGTTTAAATATTGTTTTCATCTCCTACTTCTAGAATTCTTCAATTTTGATCGGTTCGTTCTTAGTCTATTTTAACTTAAATTAATCTTAAATCTCGTCCTTCAAAATTAACTTTTTTGTTTAAATTGACAAAATATTTTATGATAATTTTCTAGTGGATGCAAGTTAAGATATGAGTTTGTCTTGCACATGTATAGGGAAAACATTTAATAGACAACAGACGTTACGTTTTTAAAATAATGAAAAAAGTAAGATAAGATTAAATTTAAGATTTATTAAAAATGGAAATACTAGACATTTTTAAATACATATGTATTATATAATTGAATAAATAAGGGTTTTTTATATATATAAATTAAATAAAACTAATCCATATTTTGACAATTTTCTCAAATAATTTATCATCTTTTGTATCTTTCTTTCAAAATATCTCTTCGTTGCCTTTACGGCATGGATGAGAAGACCATGATTCCCTTTCACGTTAGCTCTGTTTGATGAATTTTGGCTTTGAATCTCATCATCTCTATCCAACCTTTATCTGGGTCTAGTGGGATGGGATGATGTGATGTGCCTTCAATTATATATATACACATTAGAGTCTGATTGTTACTATTCTTGGCCTCTTCTCCAAGTTAATTGTGTCAGTAGTTTTCAATCAAAGTCTTTATTTAATAATGTTTCCAAAATACCATTTTCTTTGAGTTAATGTTTATTTGATTTTAATTTTTTATCATCCACTACTAGCTTAAAAAAATCCATAAATACTATCGGATTCAATTGTTAAAATGGAATTAATGTTTTTTTTTAAACAAATAGTTGTGGGAGCAGGTAAGATTGTCAAATTTCCTATTCTCATTAAAAGAAAATACTATGGTTGTGTAGAAGAGTGAACCTCCCTATCTTGTGGTCATGGTAGGTTTGAGTTATGTTATTTTGATTGTTTATTGTGAACTTAACTGAATTATTATACAAATATTTGAAGTGTGTGGGTATATACATATCATCTCAATCATAAGATCAAAAGTTAGATTTTTCGTTGCATTATAAAAATTAGATAATAACTTTAAGAAAATGATTCTTTTTTAATGAGAAAGTTAAATTATTAGTAGAATGAAAAAGCAGTATGTGGTGGGACTGTTCTTATCATTTATGTTAGTTGTTATTGCAAGCCAGTCATATAATCGATTACTTTTTATCGATAGCGTATCTGATTCTCAAGCATGCTTTTGGGTTCTTCTTTCTATTCTTCTTTAAGTTGACCTTTTACCTACATCATATCTAATGATCAAATCATCCATACACTCAATTTGAACAAGAGTAATTAATTATTGTAATATATATATATATATATATATATATATATATATTCGTGGATTCCATATTTTATACTTCGTTCGTAGGAATTTTTAAATTTAATTTTTATTTCATCCATGAATTTCAAGATCTTATATACTTCACCATTAAATTAGATCGATATGATGTTAGATTTTCCTTATTTACAATTTTCCGATAGTGTTCTTAAATCTGAATTGTTCTCTTGCAATCGACCACTCTTTCTTCAATTTATATACTAAGTAAATCTTTGTGTTGATTCTTCACTGTTTATGTTTTTCAATTGATCTTTCTATGCTTAATGACTTTACACTTTTAATGTTGAAATAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCTGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAGAGTCGTTACTTTTGGCCACAAAACATTAGTCAAGAAGTAGCAGCCCAAACTATATTTACGTTATTAAATAAAGAAGGTTTGTTTGTTTGTTTAAGTGTTTGGAGTCTTTGTGTTGTTTTGTAAAAGGTTAAAAAGCAAATGGTTATTATATAGTGTTTGTACCAAACTATATTACGTTGTTTGGATGTTTTTGTGCCCTTCTTTGACTATACAAAATAGTGTGCTTTTATAGCTCTATATTTCTTCTTCCAACTTGAAGCTTAATGGCTCCTTTTTTAAGTGATAATAATTTAAGGTAAAATATTACCTTCGGCCACTGAGTACTTTTAGTTTAACTTTCCTAACTCTTCCAAAATACAAGAAACTAAAATGAACTTAAATAGAAGTAAATTGAGTTAACCAAAATTGGAACAGTGTGAAGTGGAATATTTTGGGATGAGAAAGTTTGAAATTTAGATATAATGGAACATTGAAATGAGAAATCTAAGTTTGGAGGCCAAAAAGAATATAATAATCCTCCAGTATAAGACTTTATGGAGATTTTTTCGAGTCTCTTTTTTCGTTTCTGAAAAGGACATTTTTAAAAGGACTTTTTACGTATATT

mRNA sequence

CGGAGAAGGCAATTTGCGTTGCGGATGAGAAAGGTTCTCTAGTTTTGTCGTCTTTTGGGGTACGACGACGTATAGGTGGATTATAAATACGAAATTACCGCTAACGATTGGAGATCAGAAGCGATTAATCGCCATTTTCTTTCTTCTTCTTCTTCTTCATCATCTCTCTCTCTCTCTCTGCTTAGGTGCAGTTTTTTCTGGTTCTTTGTTTTTTCTCCATCTCTCTCTCTCTTTAAGCCTGAATTGTATGGCCGCTAATTCGAGGAGCGTAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGACCTGTGATCCACTTCGTAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCTGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAGAGTCGTTACTTTTGGCCACAAAACATTAGTCAAGAAGTAGCAGCCCAAACTATATTTACGTTATTAAATAAAGAAGGTTTGTTTGTTTGTTTAAGTGTTTGGAGTCTTTGTGTTGTTTTGTAAAAGGTTAAAAAGCAAATGGTTATTATATAGTGTTTGTACCAAACTATATTACGTTGTTTGGATGTTTTTGTGCCCTTCTTTGACTATACAAAATAGTGTGCTTTTATAGCTCTATATTTCTTCTTCCAACTTGAAGCTTAATGGCTCCTTTTTTAAGTGATAATAATTTAAGGTAAAATATTACCTTCGGCCACTGAGTACTTTTAGTTTAACTTTCCTAACTCTTCCAAAATACAAGAAACTAAAATGAACTTAAATAGAAGTAAATTGAGTTAACCAAAATTGGAACAGTGTGAAGTGGAATATTTTGGGATGAGAAAGTTTGAAATTTAGATATAATGGAACATTGAAATGAGAAATCTAAGTTTGGAGGCCAAAAAGAATATAATAATCCTCCAGTATAAGACTTTATGGAGATTTTTTCGAGTCTCTTTTTTCGTTTCTGAAAAGGACATTTTTAAAAGGACTTTTTACGTATATT

Coding sequence (CDS)

ATGGCCGCTAATTCGAGGAGCGTAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGACCTGTGATCCACTTCGTAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCTGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAG

Protein sequence

MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL*
Homology
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BLAST of CsGy4G004280 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-19
Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 42  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAAN 101
           R  HTS YDKN EE+++PS VPD++I+P   +D YW+PHPQTGVFGP+S      +  A 
Sbjct: 32  RNDHTSAYDKNVEEELQPSQVPDEMIKPD--SDKYWSPHPQTGVFGPSSS-----STNAK 91

Query: 102 RAADGGNYSAVEEEKAWFRPTSLEDSEKPH 132
               GG   +V EEKAWFRPTSLED +K H
Sbjct: 92  DEFRGGQEDSVMEEKAWFRPTSLEDLDKTH 114

[Close]
BLAST of CsGy4G004280 vs. NCBI nr
Match: XP_004146886.1 (late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hypothetical protein Csa_014444 [Cucumis sativus])

HSP 1 Score: 270 bits (689), Expect = 4.20e-91
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS
Sbjct: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR
Sbjct: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 133
           PTSLEDSEKPHGL
Sbjct: 121 PTSLEDSEKPHGL 133

[Close]
BLAST of CsGy4G004280 vs. NCBI nr
Match: XP_038901450.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida])

HSP 1 Score: 238 bits (607), Expect = 1.22e-78
Identity = 121/133 (90.98%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS G IAGLGKRITDQIWT DPLRNSVISSSAPK RRAAHTS YDKNP+EQVRPS
Sbjct: 1   MAANSRSAGVIAGLGKRITDQIWTSDPLRNSVISSSAPKIRRAAHTSAYDKNPDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           +VPDDVIQ QAA D YWAPHPQTGVFGPASDNPAA  AAANRAADGGNYSAVEEEKAWFR
Sbjct: 61  VVPDDVIQSQAA-DKYWAPHPQTGVFGPASDNPAA--AAANRAADGGNYSAVEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 133
           PTSLEDSEKPHGL
Sbjct: 121 PTSLEDSEKPHGL 130

[Close]
BLAST of CsGy4G004280 vs. NCBI nr
Match: XP_008453829.1 (PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo])

HSP 1 Score: 236 bits (601), Expect = 1.07e-77
Identity = 124/134 (92.54%), Postives = 124/134 (92.54%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTC-DPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60
           MAANSRS GAIAGLGKRITDQIWT  D LRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 61  SIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWF 120
           SIVPDDVIQPQAA D YWAPHPQTGVFGP SDNPAAVAAA NRAAD GNYSA EEEKAWF
Sbjct: 61  SIVPDDVIQPQAA-DKYWAPHPQTGVFGPTSDNPAAVAAA-NRAADVGNYSAAEEEKAWF 120

Query: 121 RPTSLEDSEKPHGL 133
           RPTSLEDSEKPHGL
Sbjct: 121 RPTSLEDSEKPHGL 132

[Close]
BLAST of CsGy4G004280 vs. NCBI nr
Match: XP_023552006.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222 bits (566), Expect = 2.41e-72
Identity = 114/134 (85.07%), Postives = 118/134 (88.06%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGL KRITDQIW  DPLRNS ISS+APKFRRAAHTS YDKN +EQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNP-AAVAAAANRAADGGNYSAVEEEKAWF 120
           IVPDDVIQPQ+A D YWAPHPQTGVFGPA+ NP AAVAA AN  ADGGNYS VEEEKAWF
Sbjct: 61  IVPDDVIQPQSA-DKYWAPHPQTGVFGPATINPVAAVAAVANHTADGGNYSIVEEEKAWF 120

Query: 121 RPTSLEDSEKPHGL 133
           RPTSLEDSEKPHG 
Sbjct: 121 RPTSLEDSEKPHGF 133

[Close]
BLAST of CsGy4G004280 vs. NCBI nr
Match: XP_022984594.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima])

HSP 1 Score: 220 bits (561), Expect = 1.26e-71
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGL KRITDQIWT DPLRNS ISS+APKFRRAAHTS YDKN +EQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQ+A D YWAPHPQTGVFGPA+ NP  +AA AN  ADGGNYS VEEEKAWFR
Sbjct: 61  IVPDDVIQPQSA-DKYWAPHPQTGVFGPATINP--MAAVANHTADGGNYSIVEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 133
           PTSLEDSEKPHG 
Sbjct: 121 PTSLEDSEKPHGF 130

[Close]
BLAST of CsGy4G004280 vs. ExPASy TrEMBL
Match: A0A1S3BYE5 (uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 5.20e-78
Identity = 124/134 (92.54%), Postives = 124/134 (92.54%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTC-DPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60
           MAANSRS GAIAGLGKRITDQIWT  D LRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 61  SIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWF 120
           SIVPDDVIQPQAA D YWAPHPQTGVFGP SDNPAAVAAA NRAAD GNYSA EEEKAWF
Sbjct: 61  SIVPDDVIQPQAA-DKYWAPHPQTGVFGPTSDNPAAVAAA-NRAADVGNYSAAEEEKAWF 120

Query: 121 RPTSLEDSEKPHGL 133
           RPTSLEDSEKPHGL
Sbjct: 121 RPTSLEDSEKPHGL 132

[Close]
BLAST of CsGy4G004280 vs. ExPASy TrEMBL
Match: A0A6J1JAZ8 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111482838 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 6.10e-72
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGL KRITDQIWT DPLRNS ISS+APKFRRAAHTS YDKN +EQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQ+A D YWAPHPQTGVFGPA+ NP  +AA AN  ADGGNYS VEEEKAWFR
Sbjct: 61  IVPDDVIQPQSA-DKYWAPHPQTGVFGPATINP--MAAVANHTADGGNYSIVEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 133
           PTSLEDSEKPHG 
Sbjct: 121 PTSLEDSEKPHGF 130

[Close]
BLAST of CsGy4G004280 vs. ExPASy TrEMBL
Match: A0A6J1CHE9 (late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=3673 GN=LOC111011456 PE=4 SV=1)

HSP 1 Score: 213 bits (543), Expect = 3.07e-69
Identity = 109/132 (82.58%), Postives = 117/132 (88.64%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGLGKRIT+QIWT DPLRNS ISSSAPKFRRAAHTSVYDKNP+EQ RPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPD+VIQPQ   D YWAPHPQTGVFGP +D+P A AA   +AA+GG+Y AVEEEKAWFR
Sbjct: 61  IVPDEVIQPQP--DKYWAPHPQTGVFGPVTDHPTAAAA---KAANGGSY-AVEEEKAWFR 120

Query: 121 PTSLEDSEKPHG 132
           PTSLEDSEKPHG
Sbjct: 121 PTSLEDSEKPHG 126

[Close]
BLAST of CsGy4G004280 vs. ExPASy TrEMBL
Match: A0A6J1E3E9 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111430463 PE=4 SV=1)

HSP 1 Score: 213 bits (543), Expect = 3.38e-69
Identity = 109/133 (81.95%), Postives = 116/133 (87.22%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGL KRITDQIW  DPLRNS ISS+APKFRRAAH+S YDKN +EQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHSSTYDKNHDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQ+A D YWAP+PQTGVFGPA+ NP  VAA AN  A+GGNYS VEEEKAWFR
Sbjct: 61  IVPDDVIQPQSA-DKYWAPNPQTGVFGPATINP--VAAVANHTANGGNYSIVEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 133
           PTSLEDSEKPHG 
Sbjct: 121 PTSLEDSEKPHGF 130

[Close]
BLAST of CsGy4G004280 vs. ExPASy TrEMBL
Match: A0A6J1FNH5 (late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447057 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 1.35e-65
Identity = 106/133 (79.70%), Postives = 113/133 (84.96%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGLGKRIT+QIWT D    S ISSSA KFRRAAHTS YDKNP+EQVRPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSD----SAISSSALKFRRAAHTSAYDKNPDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQAA + YWAPHP TGVFGP +D P   AAA +RAADGGN++A EEEKAWFR
Sbjct: 61  IVPDDVIQPQAA-EKYWAPHPHTGVFGPEADQP--TAAAGSRAADGGNHAAAEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 133
           PTSLEDSEKPHG 
Sbjct: 121 PTSLEDSEKPHGF 126

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BLAST of CsGy4G004280 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-20
Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 42  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAAN 101
           R  HTS YDKN EE+++PS VPD++I+P   +D YW+PHPQTGVFGP+S      +  A 
Sbjct: 32  RNDHTSAYDKNVEEELQPSQVPDEMIKPD--SDKYWSPHPQTGVFGPSSS-----STNAK 91

Query: 102 RAADGGNYSAVEEEKAWFRPTSLEDSEKPH 132
               GG   +V EEKAWFRPTSLED +K H
Sbjct: 92  DEFRGGQEDSVMEEKAWFRPTSLEDLDKTH 114

[Close]
BLAST of CsGy4G004280 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 4.5e-20
Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 0 

Query: 41  RRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAA 100
           RR+ H+S YDKN E+++  S VPD+VI+P   +D YW+PHP+TGVFGP++   +A A  A
Sbjct: 37  RRSGHSSAYDKNVEDELHASAVPDEVIKPD--SDKYWSPHPKTGVFGPSTTEHSATAEGA 96

Query: 101 NRAADGGNYSAVEEEKAWFRPTSLEDSEKPH 132
           ++       +AV EE AWFRPTSLEDS+K H
Sbjct: 97  HQD------TAVLEETAWFRPTSLEDSDKTH 119

The following BLAST results are available for this feature:
BLAST of CsGy4G004280 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4KFM82.8e-1955.56Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of CsGy4G004280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146886.14.20e-91100.00late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hy... [more]
XP_038901450.11.22e-7890.98late embryogenesis abundant protein At5g17165-like [Benincasa hispida][more]
XP_008453829.11.07e-7792.54PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo][more]
XP_023552006.12.41e-7285.07late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo][more]
XP_022984594.11.26e-7184.21late embryogenesis abundant protein At5g17165-like [Cucurbita maxima][more]
BLAST of CsGy4G004280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BYE55.20e-7892.54uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=... [more]
A0A6J1JAZ86.10e-7284.21late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1CHE93.07e-6982.58late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=367... [more]
A0A6J1E3E93.38e-6981.95late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1FNH51.35e-6579.70late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita mosch... [more]
BLAST of CsGy4G004280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G17165.12.0e-2055.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G03150.14.5e-2052.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039291Late embryogenesis abundant protein At5g17165-likePANTHERPTHR35122OSJNBA0093F12.14 PROTEINcoord: 1..131
NoneNo IPR availablePANTHERPTHR35122:SF2OSJNBA0093F12.14 PROTEINcoord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G004280.2CsGy4G004280.2mRNA