CsGy4G003020 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G003020
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	rho GDP-dissociation inhibitor 1-like
Location	Gy14Chr4: 1918395 .. 1920040 (-)
RNA-Seq Expression	CsGy4G003020
Synteny	CsGy4G003020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACTGTGGTCGGTTCTCTCTCGACTAAGGATAATGTTAAGTTTAATCCTCAAGTGAGAGAGGAAAAACTTGGTACCACGATAAAAGATCGAGAAGAAGAGAAGATCATTGAAGAAGATGAAGAGAACAAACTTAAGGGAGAGAGAGAAATAATGGATCTCGGTCCTCTATTCTCTCTTAAAGAACAACTCGAAAAAGATAAGGTAAAATTTTAAAGATGGTTAACGTATTTAGAGTACGTCAACCATATATCTTTAGTAAAATTGCATAGAGGAGAGATTGAACCTTCCTTTTCTAGAAATGTTTAAGTTCATTTGTTAATTTCGATTGATCTAAGTTTACTATTGCAATAATTGCGTTTGCGATTCAATCACGTAATTTGGTTTTAGGATGATGAAAGCTTGAGGAAATGGAAAGAACAGCTGCTGGGTAGTGTGGATCTCTCAGCCATTGGAGGTGAAAATAAACCTTAATTCTTCTTTGTAATCAACATGTTTTTCTTTTCAAAATAAAAAGAAAATTACTATGATATTGTTATTGTAATTGTGGTTTATTTTAAGAATCATAACTAAATAACTCTTTTATGATATATATAAGCCAAAATCTTCCAAATACTTCATTTGCCAACCATACTTTATTAAGAACTATAGTTTATGAAAAATTATGTATTGCTCTTAAATTTAGTAAGAGAAATAGAAGGGTTTAAGGTTTTACCTTCACACATTATTTGTAGCAAAGTTGAATAATAAGATAAAATAATGTATGTTTTATTATGGTGAAAAGCAGAAAGCAAAGAAGCAGAAGTGAAAATCCTGAGCCTAACCATCCAATGTCCAGGGCGACAAGATCTTGTGCTCCCATTGCCATTTACCAAAACTTCCAAGACTAGTAGCTGCCTCTTCGCCTTAAAGGAAGGCTCTCGGTACCGACTTCTGTTCAGTTTCGTCGTTGCTGGGAACATTGTCTCGGGTCTTAAGTACACGAACACTGTCTGGAAGACTGGGGTTAGAGGTTGGTTTTCATGTCATTTGAACAAGTCGAAATAAAACTTGTTTTTTACTTTTGGTTTGATGGGTTTTGGATCCAAAGGATGAAAATATTCATCTGCATGTCGATATATCCATGAATTGAAGGGATTGCAAGATCAATATTAAATATCTCTCGCGATATATATCTTCAATATTTTGACATACAAAAGTATTTTATCAGTATATCTGTGTAGAACAATTGAATGGTCGATATTTTGATTGTTGGTGGTTGAACTGTCGTTGTGTTTGGCAGTGGATTATAGCAAGAAAATGCTTGGAACTTTCAGTCCTCAGAAGGAACCTTATGTGTATGAAATGGAAGAAGAAACTACACCCTCTGGAATGTTTGCAAGAGGATCCTATTCTGCAAGAACAAAGGTAACTAAAGACAAAAGCATTTTTTAGACTCTGCTTGATTATTCTAATCTTCTGTTTTTGAAAATTATAGATTTGGATTTTTCCAGAAAGTATAATTAAGTAGAGAATTGAAGTTTGGTTGATTGTTTTGTTGTTAAACACAGTTTGTGGATGATGATGGGAAGTGCTATTTGGATGTGAGTTACCATTTTGAAATCCAAAAGAAGTGGCCAACAACACCCTCTACTTCATCATGA

mRNA sequence

ATGTCGACTGTGGTCGGTTCTCTCTCGACTAAGGATAATGTTAAGTTTAATCCTCAAGTGAGAGAGGAAAAACTTGGTACCACGATAAAAGATCGAGAAGAAGAGAAGATCATTGAAGAAGATGAAGAGAACAAACTTAAGGGAGAGAGAGAAATAATGGATCTCGGTCCTCTATTCTCTCTTAAAGAACAACTCGAAAAAGATAAGGATGATGAAAGCTTGAGGAAATGGAAAGAACAGCTGCTGGGTAGTGTGGATCTCTCAGCCATTGGAGAAAGCAAAGAAGCAGAAGTGAAAATCCTGAGCCTAACCATCCAATGTCCAGGGCGACAAGATCTTGTGCTCCCATTGCCATTTACCAAAACTTCCAAGACTAGTAGCTGCCTCTTCGCCTTAAAGGAAGGCTCTCGGTACCGACTTCTGTTCAGTTTCGTCGTTGCTGGGAACATTGTCTCGGGTCTTAAGTACACGAACACTGTCTGGAAGACTGGGGTTAGAGTGGATTATAGCAAGAAAATGCTTGGAACTTTCAGTCCTCAGAAGGAACCTTATGTGTATGAAATGGAAGAAGAAACTACACCCTCTGGAATGTTTGCAAGAGGATCCTATTCTGCAAGAACAAAGTTTGTGGATGATGATGGGAAGTGCTATTTGGATGTGAGTTACCATTTTGAAATCCAAAAGAAGTGGCCAACAACACCCTCTACTTCATCATGA

Coding sequence (CDS)

ATGTCGACTGTGGTCGGTTCTCTCTCGACTAAGGATAATGTTAAGTTTAATCCTCAAGTGAGAGAGGAAAAACTTGGTACCACGATAAAAGATCGAGAAGAAGAGAAGATCATTGAAGAAGATGAAGAGAACAAACTTAAGGGAGAGAGAGAAATAATGGATCTCGGTCCTCTATTCTCTCTTAAAGAACAACTCGAAAAAGATAAGGATGATGAAAGCTTGAGGAAATGGAAAGAACAGCTGCTGGGTAGTGTGGATCTCTCAGCCATTGGAGAAAGCAAAGAAGCAGAAGTGAAAATCCTGAGCCTAACCATCCAATGTCCAGGGCGACAAGATCTTGTGCTCCCATTGCCATTTACCAAAACTTCCAAGACTAGTAGCTGCCTCTTCGCCTTAAAGGAAGGCTCTCGGTACCGACTTCTGTTCAGTTTCGTCGTTGCTGGGAACATTGTCTCGGGTCTTAAGTACACGAACACTGTCTGGAAGACTGGGGTTAGAGTGGATTATAGCAAGAAAATGCTTGGAACTTTCAGTCCTCAGAAGGAACCTTATGTGTATGAAATGGAAGAAGAAACTACACCCTCTGGAATGTTTGCAAGAGGATCCTATTCTGCAAGAACAAAGTTTGTGGATGATGATGGGAAGTGCTATTTGGATGTGAGTTACCATTTTGAAATCCAAAAGAAGTGGCCAACAACACCCTCTACTTCATCATGA

Protein sequence

MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFTKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS*

Homology

[Close]

BLAST of CsGy4G003020 vs. ExPASy Swiss-Prot
Match: Q9SFC6 (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.6e-63
Identity = 123/193 (63.73%), Postives = 152/193 (78.76%), Query Frame = 0


Query: 39  EEDEENKLKGEREIMDLGPLFSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEV 98
           EED+++KL+       LGP +++KE LEKDKDDESLRKWKEQLLGSVD++ IGE+ + EV
Sbjct: 55  EEDDDSKLQ-------LGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEV 114

Query: 99  KILSLTIQCPGRQDLVLPLPFTKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTN 158
           +I SL I  PGR D+VL +P  +        F LKEGS+Y L F+F V  NIVSGL+YTN
Sbjct: 115 RIDSLAIISPGRPDIVLLVP--ENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTN 174

Query: 159 TVWKTGVRVDYSKKMLGTFSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYL 218
           TVWKTGV+VD +K+MLGTFSPQ EPY + M EETTPSGMFARGSYSARTKF+DDD KCYL
Sbjct: 175 TVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYL 234

Query: 219 DVSYHFEIQKKWP 232
           +++Y F+I+K+WP
Sbjct: 235 EINYSFDIRKEWP 238

[Close]

BLAST of CsGy4G003020 vs. ExPASy Swiss-Prot
Match: P52565 (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 119.8 bits (299), Expect = 4.3e-26
Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 0


Query: 60  SLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQC---PGRQDLVLP 119
           S++E  E DKDDESLRK+KE LLG V +SA  +     V +  LT+ C   PG  +L L 
Sbjct: 34  SIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPNVVVTGLTLVCSSAPGPLELDLT 93

Query: 120 LPFTKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGT 179
                  K S   F LKEG  YR+  SF V   IVSG+KY    ++ GV++D +  M+G+
Sbjct: 94  GDLESFKKQS---FVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGS 153

Query: 180 FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKW 231
           + P+ E Y +    E  P GM ARGSYS +++F DDD   +L   ++  I+K W
Sbjct: 154 YGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 202

[Close]

BLAST of CsGy4G003020 vs. ExPASy Swiss-Prot
Match: Q4R4J0 (Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.3e-26
Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 0


Query: 60  SLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQC---PGRQDLVLP 119
           S++E  E DKDDESLRK+KE LLG V +SA  +     V +  LT+ C   PG  +L L 
Sbjct: 34  SIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPNVVVTGLTLVCSSAPGPLELDLT 93

Query: 120 LPFTKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGT 179
                  K S   F LKEG  YR+  SF V   IVSG+KY    ++ GV++D +  M+G+
Sbjct: 94  GDLESFKKQS---FVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGS 153

Query: 180 FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKW 231
           + P+ E Y +    E  P GM ARGSYS +++F DDD   +L   ++  I+K W
Sbjct: 154 YGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 202

[Close]

BLAST of CsGy4G003020 vs. ExPASy Swiss-Prot
Match: P19803 (Rho GDP-dissociation inhibitor 1 OS=Bos taurus OX=9913 GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 119.0 bits (297), Expect = 7.3e-26
Identity = 71/174 (40.80%), Postives = 100/174 (57.47%), Query Frame = 0


Query: 60  SLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQC---PGRQDLVLP 119
           S++E  E DKDDESLRK+KE LLG V +SA  +     V +  LT+ C   PG  +L L 
Sbjct: 34  SIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPNVVVTRLTLVCSTAPGPLELDLT 93

Query: 120 LPFTKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGT 179
                  K S   F LKEG  YR+  SF V   IVSG+KY    ++ GV++D +  M+G+
Sbjct: 94  GDLESFKKQS---FVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGS 153

Query: 180 FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKW 231
           + P+ E Y +    E  P GM ARGSY+ +++F DDD   +L   ++  I+K+W
Sbjct: 154 YGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDRTDHLSWEWNLTIKKEW 202

[Close]

BLAST of CsGy4G003020 vs. ExPASy Swiss-Prot
Match: Q99PT1 (Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3)

HSP 1 Score: 118.6 bits (296), Expect = 9.5e-26
Identity = 71/174 (40.80%), Postives = 100/174 (57.47%), Query Frame = 0


Query: 60  SLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQC---PGRQDLVLP 119
           S++E  E DKDDESLRK+KE LLG V +SA  +     V +  LT+ C   PG  +L L 
Sbjct: 34  SIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPNVIVTRLTLVCSTAPGPLELDLT 93

Query: 120 LPFTKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGT 179
                  K S   F LKEG  YR+  SF V   IVSG+KY    ++ GV++D +  M+G+
Sbjct: 94  GDLESFKKQS---FVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGS 153

Query: 180 FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKW 231
           + P+ E Y +    E  P GM ARGSY+ +++F DDD   +L   ++  I+K+W
Sbjct: 154 YGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDKTDHLSWEWNLTIKKEW 202

[Close]

BLAST of CsGy4G003020 vs. NCBI nr
Match: XP_004152300.1 (rho GDP-dissociation inhibitor 1 isoform X2 [Cucumis sativus] >KGN53053.1 hypothetical protein Csa_015050 [Cucumis sativus])

HSP 1 Score: 469 bits (1207), Expect = 1.27e-166
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60
           MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS
Sbjct: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60

Query: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120
           LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT
Sbjct: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120

Query: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180
           KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ
Sbjct: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180

Query: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS 238
           KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS
Sbjct: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS 238

[Close]

BLAST of CsGy4G003020 vs. NCBI nr
Match: XP_031740519.1 (rho GDP-dissociation inhibitor 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 464 bits (1195), Expect = 8.90e-165
Identity = 238/239 (99.58%), Postives = 238/239 (99.58%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60
           MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS
Sbjct: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60

Query: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIG-ESKEAEVKILSLTIQCPGRQDLVLPLPF 120
           LKEQLEKDKDDESLRKWKEQLLGSVDLSAIG ESKEAEVKILSLTIQCPGRQDLVLPLPF
Sbjct: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGAESKEAEVKILSLTIQCPGRQDLVLPLPF 120

Query: 121 TKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSP 180
           TKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSP
Sbjct: 121 TKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSP 180

Query: 181 QKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS 238
           QKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS
Sbjct: 181 QKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS 239

[Close]

BLAST of CsGy4G003020 vs. NCBI nr
Match: XP_008454005.1 (PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo])

HSP 1 Score: 419 bits (1078), Expect = 6.29e-147
Identity = 224/242 (92.56%), Postives = 229/242 (94.63%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGT-TIKDREEEKIIEEDEE-NKLKGEREIMDLGPL 60
           MST VGSLSTKD VKFNPQVREE+LG  T+ DREEEKI EE+EE NKLKGERE MDLGPL
Sbjct: 1   MSTAVGSLSTKD-VKFNPQVREEELGRMTMIDREEEKITEEEEEENKLKGERE-MDLGPL 60

Query: 61  FSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLP 120
           FSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLP
Sbjct: 61  FSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLP 120

Query: 121 FTKTSKTSS--CLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGT 180
           FTKT+  SS  CLF LKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVD+SKKMLGT
Sbjct: 121 FTKTASKSSSRCLFTLKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDHSKKMLGT 180

Query: 181 FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPST 238
           FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPST
Sbjct: 181 FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPST 240

[Close]

BLAST of CsGy4G003020 vs. NCBI nr
Match: XP_038877932.1 (rho GDP-dissociation inhibitor 1-like [Benincasa hispida])

HSP 1 Score: 393 bits (1009), Expect = 1.49e-136
Identity = 205/232 (88.36%), Postives = 216/232 (93.10%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60
           MS VV SLSTKD VKFNPQ+ EE+LG T+ +REEE+IIEEDEENKLK +R  MDLGP FS
Sbjct: 1   MSAVVDSLSTKD-VKFNPQIGEEELGRTMNNREEEEIIEEDEENKLKLDR-GMDLGPQFS 60

Query: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120
           LKEQLEKDKDDESLRKWKEQLLG VDLSAIGESKEAEVKILSLTIQCPGR+DLVLPLPFT
Sbjct: 61  LKEQLEKDKDDESLRKWKEQLLGCVDLSAIGESKEAEVKILSLTIQCPGREDLVLPLPFT 120

Query: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180
           KTSK SS LF LKEGSRYRL FSFVVAGNIVSGLKYTNT+WK+GVRVDY+KKMLGTFSPQ
Sbjct: 121 KTSKNSS-LFTLKEGSRYRLRFSFVVAGNIVSGLKYTNTIWKSGVRVDYTKKMLGTFSPQ 180

Query: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPT 232
           KEPYVY MEEETTPSGMFARGSY+ARTKFVDDDGKCYLDVSYHFEIQKKWPT
Sbjct: 181 KEPYVYGMEEETTPSGMFARGSYTARTKFVDDDGKCYLDVSYHFEIQKKWPT 229

[Close]

BLAST of CsGy4G003020 vs. NCBI nr
Match: XP_023538815.1 (rho GDP-dissociation inhibitor 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382 bits (981), Expect = 2.74e-132
Identity = 199/232 (85.78%), Postives = 214/232 (92.24%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60
           MS VVGSLSTK NVKFNPQV EE+LG ++ DRE E+IIEEDE++KLK E E+ DLGP FS
Sbjct: 1   MSAVVGSLSTK-NVKFNPQVGEEELGKSMNDREGEEIIEEDEDDKLKPEGEV-DLGPRFS 60

Query: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120
           +KEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKI SLTIQCPGR DLVLPLPFT
Sbjct: 61  IKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCPGRADLVLPLPFT 120

Query: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180
           KTSK++S LFA+KEGSRYRL FSFVV GNIVSGLKYTNTVWKTGVRVD++KKMLGTFSPQ
Sbjct: 121 KTSKSNS-LFAIKEGSRYRLRFSFVVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQ 180

Query: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPT 232
           K+PYVYEMEEE TPSGMFARGSYSARTKFVDDDGKC+LDVSYHFEIQK W T
Sbjct: 181 KDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWAT 229

[Close]

BLAST of CsGy4G003020 vs. ExPASy TrEMBL
Match: A0A0A0KU57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012490 PE=3 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 6.15e-167
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60
           MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS
Sbjct: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60

Query: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120
           LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT
Sbjct: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120

Query: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180
           KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ
Sbjct: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180

Query: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS 238
           KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS
Sbjct: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS 238

[Close]

BLAST of CsGy4G003020 vs. ExPASy TrEMBL
Match: A0A1S3BYU4 (rho GDP-dissociation inhibitor 1-like OS=Cucumis melo OX=3656 GN=LOC103494555 PE=3 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 3.05e-147
Identity = 224/242 (92.56%), Postives = 229/242 (94.63%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGT-TIKDREEEKIIEEDEE-NKLKGEREIMDLGPL 60
           MST VGSLSTKD VKFNPQVREE+LG  T+ DREEEKI EE+EE NKLKGERE MDLGPL
Sbjct: 1   MSTAVGSLSTKD-VKFNPQVREEELGRMTMIDREEEKITEEEEEENKLKGERE-MDLGPL 60

Query: 61  FSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLP 120
           FSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLP
Sbjct: 61  FSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLP 120

Query: 121 FTKTSKTSS--CLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGT 180
           FTKT+  SS  CLF LKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVD+SKKMLGT
Sbjct: 121 FTKTASKSSSRCLFTLKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDHSKKMLGT 180

Query: 181 FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPST 238
           FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPST
Sbjct: 181 FSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPST 240

[Close]

BLAST of CsGy4G003020 vs. ExPASy TrEMBL
Match: A0A6J1IA85 (rho GDP-dissociation inhibitor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470676 PE=3 SV=1)

HSP 1 Score: 380 bits (976), Expect = 7.67e-132
Identity = 198/232 (85.34%), Postives = 213/232 (91.81%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60
           MS VVGSLSTK NVKFNPQV EE+LG ++ DRE E+IIEEDE++KLK E E+ DLGP FS
Sbjct: 1   MSAVVGSLSTK-NVKFNPQVGEEELGKSMNDREGEEIIEEDEDDKLKPEGEV-DLGPRFS 60

Query: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120
           +KEQLEKDKDD SLRKWKEQLLGSVDLSAIGESKEAEVKI SLTIQCPGR DLVLPLPFT
Sbjct: 61  IKEQLEKDKDDVSLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCPGRADLVLPLPFT 120

Query: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180
           KTSK++S LFA+KEGSRYRL FSF+V GNIVSGLKYTNTVWKTGVRVD++KKMLGTFSPQ
Sbjct: 121 KTSKSNS-LFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQ 180

Query: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPT 232
           KEPYVYEMEEE TPSGMFARGSYSARTKFVDDDGKC+LDVSYHFEIQK W T
Sbjct: 181 KEPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWAT 229

[Close]

BLAST of CsGy4G003020 vs. ExPASy TrEMBL
Match: A0A5D3CZ51 (Rho GDP-dissociation inhibitor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001510 PE=3 SV=1)

HSP 1 Score: 377 bits (968), Expect = 6.01e-131
Identity = 202/240 (84.17%), Postives = 204/240 (85.00%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60
           MST VGSLSTKD VKFNPQ                            GERE MDLGPLFS
Sbjct: 1   MSTAVGSLSTKD-VKFNPQ----------------------------GERE-MDLGPLFS 60

Query: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120
           LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT
Sbjct: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120

Query: 121 KTSKTSS--CLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFS 180
           KT+  SS  CLF LKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVD+SKKMLGTFS
Sbjct: 121 KTASKSSSRCLFTLKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDHSKKMLGTFS 180

Query: 181 PQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS 238
           PQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS
Sbjct: 181 PQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPTTPSTSS 210

[Close]

BLAST of CsGy4G003020 vs. ExPASy TrEMBL
Match: A0A6J1EXP3 (rho GDP-dissociation inhibitor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439153 PE=3 SV=1)

HSP 1 Score: 375 bits (963), Expect = 7.33e-130
Identity = 195/232 (84.05%), Postives = 212/232 (91.38%), Query Frame = 0


Query: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60
           MS VVGSLSTK NVKFNPQV EE+L  ++ DRE E+IIE+DE++KLK E E+ DLGP FS
Sbjct: 1   MSAVVGSLSTK-NVKFNPQVGEEELSKSMNDREGEEIIEDDEDDKLKPEGEV-DLGPRFS 60

Query: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120
           +KEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKI SLTIQC GR DLVLPLPFT
Sbjct: 61  IKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLPLPFT 120

Query: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180
           KTSK++S LFA+KEGSRYRL FSF+V GNIVSGLKYTNTVWKTGVRVD++KKMLGTFSPQ
Sbjct: 121 KTSKSNS-LFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQ 180

Query: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPT 232
           K+PYVYEMEEE TPSGMFARGSYSARTKFVDDDGKC+LDVSYHFEIQK W T
Sbjct: 181 KDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWAT 229

[Close]

BLAST of CsGy4G003020 vs. TAIR 10
Match: AT3G07880.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.8e-64
Identity = 123/193 (63.73%), Postives = 152/193 (78.76%), Query Frame = 0


Query: 39  EEDEENKLKGEREIMDLGPLFSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEV 98
           EED+++KL+       LGP +++KE LEKDKDDESLRKWKEQLLGSVD++ IGE+ + EV
Sbjct: 55  EEDDDSKLQ-------LGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEV 114

Query: 99  KILSLTIQCPGRQDLVLPLPFTKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTN 158
           +I SL I  PGR D+VL +P  +        F LKEGS+Y L F+F V  NIVSGL+YTN
Sbjct: 115 RIDSLAIISPGRPDIVLLVP--ENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTN 174

Query: 159 TVWKTGVRVDYSKKMLGTFSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYL 218
           TVWKTGV+VD +K+MLGTFSPQ EPY + M EETTPSGMFARGSYSARTKF+DDD KCYL
Sbjct: 175 TVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYL 234

Query: 219 DVSYHFEIQKKWP 232
           +++Y F+I+K+WP
Sbjct: 235 EINYSFDIRKEWP 238

[Close]

BLAST of CsGy4G003020 vs. TAIR 10
Match: AT1G62450.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 8.4e-62
Identity = 119/208 (57.21%), Postives = 153/208 (73.56%), Query Frame = 0


Query: 23  EKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFSLKEQLEKDKDDESLRKWKEQLL 82
           EK+G + K+        ED+E   + E + ++LGP+ +LKEQLE+DKDDESLR+WKEQLL
Sbjct: 18  EKMGLSRKNSGSSLSPTEDDE---EDEDKKLELGPMIALKEQLERDKDDESLRRWKEQLL 77

Query: 83  GSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFTKTSKTSSCLFALKEGSRYRLLF 142
           G VDL  +GE+ +  VKIL LTI+ P R+++VL +P           F +KEGS+Y L+F
Sbjct: 78  GVVDLEDVGETPDPVVKILDLTIRSPDREEMVLTIPEDGLPNPKGPWFTIKEGSKYTLVF 137

Query: 143 SFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQKEPYVYEMEEETTPSGMFARGS 202
           +F V  NIVSGL+Y NTVWKTGV+VD +K MLGTFSPQ E Y + M EE TPSGMFARGS
Sbjct: 138 NFRVTNNIVSGLRYNNTVWKTGVKVDSTKAMLGTFSPQAESYQHVMPEEMTPSGMFARGS 197

Query: 203 YSARTKFVDDDGKCYLDVSYHFEIQKKW 231
           YSARTKF+DDD KCYL+++Y F+I+K W
Sbjct: 198 YSARTKFIDDDNKCYLEINYTFDIRKSW 222

[Close]

BLAST of CsGy4G003020 vs. TAIR 10
Match: AT1G12070.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 229.2 bits (583), Expect = 3.5e-60
Identity = 113/192 (58.85%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 39  EEDEENKLKGEREIMDLGPLFSLKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEV 98
           EE+E+ KL       +LGP+ +LKEQLEKDKDDESLR+WKEQLLGSVDL  +GE+ +  V
Sbjct: 38  EEEEDKKL-------ELGPMIALKEQLEKDKDDESLRRWKEQLLGSVDLEEVGETPDPLV 97

Query: 99  KILSLTIQCPGRQDLVLPLPFTKTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTN 158
           KIL+LTI+ P R+D+VL +P      +    F LKEGS+Y L+F+F V  NIVSGL+Y+N
Sbjct: 98  KILTLTIRSPDREDMVLTIPENGKPASKGPWFTLKEGSKYTLIFTFRVTNNIVSGLQYSN 157

Query: 159 TVWKTGVRVDYSKKMLGTFSPQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYL 218
           TVWKTG++V   K+MLGTFSPQ EPY + M EET PSG+  RGSYS ++KFVDDD +CYL
Sbjct: 158 TVWKTGIKVYSRKEMLGTFSPQAEPYTHVMFEETAPSGLLVRGSYSVKSKFVDDDNQCYL 217

Query: 219 DVSYHFEIQKKW 231
           + +Y F+I+K W
Sbjct: 218 ENNYTFDIRKNW 222

The following BLAST results are available for this feature:

BLAST of CsGy4G003020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFC6	2.6e-63	63.73	Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV...	[more]
P52565	4.3e-26	41.38	Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3	[more]
Q4R4J0	4.3e-26	41.38	Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 ...	[more]
P19803	7.3e-26	40.80	Rho GDP-dissociation inhibitor 1 OS=Bos taurus OX=9913 GN=ARHGDIA PE=1 SV=3	[more]
Q99PT1	9.5e-26	40.80	Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3	[more]

BLAST of CsGy4G003020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152300.1	1.27e-166	100.00	rho GDP-dissociation inhibitor 1 isoform X2 [Cucumis sativus] >KGN53053.1 hypoth...	[more]
XP_031740519.1	8.90e-165	99.58	rho GDP-dissociation inhibitor 1 isoform X1 [Cucumis sativus]	[more]
XP_008454005.1	6.29e-147	92.56	PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo]	[more]
XP_038877932.1	1.49e-136	88.36	rho GDP-dissociation inhibitor 1-like [Benincasa hispida]	[more]
XP_023538815.1	2.74e-132	85.78	rho GDP-dissociation inhibitor 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy4G003020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU57	6.15e-167	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012490 PE=3 SV=1	[more]
A0A1S3BYU4	3.05e-147	92.56	rho GDP-dissociation inhibitor 1-like OS=Cucumis melo OX=3656 GN=LOC103494555 PE...	[more]
A0A6J1IA85	7.67e-132	85.34	rho GDP-dissociation inhibitor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5D3CZ51	6.01e-131	84.17	Rho GDP-dissociation inhibitor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1EXP3	7.33e-130	84.05	rho GDP-dissociation inhibitor 1-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of CsGy4G003020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07880.1	1.8e-64	63.73	Immunoglobulin E-set superfamily protein	[more]
AT1G62450.1	8.4e-62	57.21	Immunoglobulin E-set superfamily protein	[more]
AT1G12070.1	3.5e-60	58.85	Immunoglobulin E-set superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000406	Rho protein GDP-dissociation inhibitor	PRINTS	PR00492	RHOGDI	coord: 150..166 score: 50.98 coord: 209..226 score: 33.33 coord: 167..182 score: 33.33
IPR000406	Rho protein GDP-dissociation inhibitor	PFAM	PF02115	Rho_GDI	coord: 40..229 e-value: 2.9E-79 score: 265.4
IPR000406	Rho protein GDP-dissociation inhibitor	PANTHER	PTHR10980	RHO GDP-DISSOCIATION INHIBITOR	coord: 12..232
IPR024792	Rho GDP-dissociation inhibitor domain superfamily	GENE3D	2.70.50.30	Coagulation Factor XIII, subunit A, domain 1	coord: 52..232 e-value: 1.3E-65 score: 222.6
None	No IPR available	PANTHER	PTHR10980:SF36	OS01G0913600 PROTEIN	coord: 12..232
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 36..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G003020.2	CsGy4G003020.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0007266	Rho protein signal transduction
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016020	membrane
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005094	Rho GDP-dissociation inhibitor activity