CsGy4G002420 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACAATCACAGAAGCTTTAGAATGCTCTCTTCAAAAATGTTCCTTAACCCATAATCATCATCATCATCATCATCATCATCAAACTCATCAAGCTCATCAACAACCTCTAATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTATTCATCAGCATCAGCATCAGCAATCAACCTCTTTGGATCTCAACTCTCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGGTTTTTTCCCTTCCTCTTTTCCTTTTTTCATTTATATATTCTTCCTAAGAATATTAAACAAAAAAACTAGGGTTTGAGTTTCACCAAAAATCCCTTTCTGAACTTTTTCTATTGTTTGGTTCTACAAGTCATGACATGGGCTTGGGTTTGAATTTGAAGAGGAATAACCTATATGTGGATTTTTTTAAAAAAGATTATGTAAAAAAAATAGCTTTTTGAACTTTTTTTCTTGTTTGGTTCTCTAATTCATGAAGTGGGTTAGGGTTTGAATTTGAAGTGGAACAATATATATGTGGATTTTTTAAAAAAAATTATATACACAAAAATCCCCTTTTTAAACTTGTTTGTTTCTACAAATTAATCAAGTGGGTTAGGGTTTGAATTTGAAAAGGAATAATATATATTATGTGGAACTATAATTTTTGTGATTTTCTTTTTGGTTGTTGATTTGTAGACAGGGGAGATATACTACATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAATAATAGATGAAGATTATCAAGATGATGAATATAGTGAAGATTACTGTTATTACTACTCAGACGACCATGAGGAGGAGGATGATATTAGCTCTTACGACAGCGAAGAGTCGTCGACAGAATCGACAAACATGAGGAAGAAGAAGAAGACGTTTGTGGTTGAAGAAGAAGAAGAAAAAGATGTATTGGTGGTTGGAGGCTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAGCATCTTCAAGATTGCCCTAAATGCAATAATGGTCAGCTTCTCCATTTTGATCGCTCTCAAAATCACATTATTCCATGA ATGGGAACAATCACAGAAGCTTTAGAATGCTCTCTTCAAAAATGTTCCTTAACCCATAATCATCATCATCATCATCATCATCATCAAACTCATCAAGCTCATCAACAACCTCTAATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTATTCATCAGCATCAGCATCAGCAATCAACCTCTTTGGATCTCAACTCTCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGACAGGGGAGATATACTACATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAATAATAGATGAAGATTATCAAGATGATGAATATAGTGAAGATTACTGTTATTACTACTCAGACGACCATGAGGAGGAGGATGATATTAGCTCTTACGACAGCGAAGAGTCGTCGACAGAATCGACAAACATGAGGAAGAAGAAGAAGACGTTTGTGGTTGAAGAAGAAGAAGAAAAAGATGTATTGGTGGTTGGAGGCTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAGCATCTTCAAGATTGCCCTAAATGCAATAATGGTCAGCTTCTCCATTTTGATCGCTCTCAAAATCACATTATTCCATGA ATGGGAACAATCACAGAAGCTTTAGAATGCTCTCTTCAAAAATGTTCCTTAACCCATAATCATCATCATCATCATCATCATCATCAAACTCATCAAGCTCATCAACAACCTCTAATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTATTCATCAGCATCAGCATCAGCAATCAACCTCTTTGGATCTCAACTCTCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGACAGGGGAGATATACTACATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAATAATAGATGAAGATTATCAAGATGATGAATATAGTGAAGATTACTGTTATTACTACTCAGACGACCATGAGGAGGAGGATGATATTAGCTCTTACGACAGCGAAGAGTCGTCGACAGAATCGACAAACATGAGGAAGAAGAAGAAGACGTTTGTGGTTGAAGAAGAAGAAGAAAAAGATGTATTGGTGGTTGGAGGCTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAGCATCTTCAAGATTGCCCTAAATGCAATAATGGTCAGCTTCTCCATTTTGATCGCTCTCAAAATCACATTATTCCATGA MGTITEALECSLQKCSLTHNHHHHHHHHQTHQAHQQPLISSSSSSSSFSSSSSSIHQHQHQQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTIIDEDYQDDEYSEDYCYYYSDDHEEEDDISSYDSEESSTESTNMRKKKKTFVVEEEEEKDVLVVGGCKRCLMYFMVPKHLQDCPKCNNGQLLHFDRSQNHIIP* Homology
BLAST of CsGy4G002420 vs. NCBI nr
Match: XP_004152315.3 (serine/threonine-protein kinase stk11 homolog [Cucumis sativus] >KAE8649084.1 hypothetical protein Csa_015288 [Cucumis sativus]) HSP 1 Score: 421 bits (1082), Expect = 2.51e-148 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CsGy4G002420 vs. NCBI nr
Match: XP_008454114.1 (PREDICTED: knob-associated histidine-rich protein-like [Cucumis melo]) HSP 1 Score: 372 bits (956), Expect = 5.18e-129 Identity = 200/220 (90.91%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of CsGy4G002420 vs. NCBI nr
Match: XP_038880672.1 (uncharacterized protein LOC120072288 [Benincasa hispida]) HSP 1 Score: 266 bits (679), Expect = 2.03e-87 Identity = 153/208 (73.56%), Postives = 167/208 (80.29%), Query Frame = 0
BLAST of CsGy4G002420 vs. NCBI nr
Match: KAG7018415.1 (hypothetical protein SDJN02_20283 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213 bits (543), Expect = 7.08e-67 Identity = 124/208 (59.62%), Postives = 145/208 (69.71%), Query Frame = 0
BLAST of CsGy4G002420 vs. NCBI nr
Match: KAG6581993.1 (hypothetical protein SDJN03_21995, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213 bits (543), Expect = 1.36e-66 Identity = 124/208 (59.62%), Postives = 145/208 (69.71%), Query Frame = 0
BLAST of CsGy4G002420 vs. ExPASy TrEMBL
Match: A0A1S3BXV1 (knob-associated histidine-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103494617 PE=4 SV=1) HSP 1 Score: 372 bits (956), Expect = 2.51e-129 Identity = 200/220 (90.91%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of CsGy4G002420 vs. ExPASy TrEMBL
Match: A0A0A0KTY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G009890 PE=4 SV=1) HSP 1 Score: 369 bits (948), Expect = 1.71e-128 Identity = 191/210 (90.95%), Postives = 192/210 (91.43%), Query Frame = 0
BLAST of CsGy4G002420 vs. ExPASy TrEMBL
Match: A0A6J1F2V9 (rho GTPase-activating protein gacH OS=Cucurbita moschata OX=3662 GN=LOC111439168 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 2.57e-66 Identity = 130/215 (60.47%), Postives = 146/215 (67.91%), Query Frame = 0
BLAST of CsGy4G002420 vs. ExPASy TrEMBL
Match: A0A6J1IQL3 (methionine aminopeptidase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479618 PE=4 SV=1) HSP 1 Score: 210 bits (535), Expect = 6.19e-66 Identity = 123/209 (58.85%), Postives = 143/209 (68.42%), Query Frame = 0
BLAST of CsGy4G002420 vs. ExPASy TrEMBL
Match: A0A6J1GTR7 (uncharacterized protein LOC111457490 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 SV=1) HSP 1 Score: 209 bits (533), Expect = 1.06e-65 Identity = 124/208 (59.62%), Postives = 144/208 (69.23%), Query Frame = 0
BLAST of CsGy4G002420 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). ) HSP 1 Score: 152.5 bits (384), Expect = 3.7e-37 Identity = 101/208 (48.56%), Postives = 120/208 (57.69%), Query Frame = 0
BLAST of CsGy4G002420 vs. TAIR 10
Match: AT2G33510.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). ) HSP 1 Score: 142.5 bits (358), Expect = 3.8e-34 Identity = 101/223 (45.29%), Postives = 120/223 (53.81%), Query Frame = 0
BLAST of CsGy4G002420 vs. TAIR 10
Match: AT1G28070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 127.9 bits (320), Expect = 9.8e-30 Identity = 89/203 (43.84%), Postives = 112/203 (55.17%), Query Frame = 0
BLAST of CsGy4G002420 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 5.4e-04 Identity = 23/61 (37.70%), Postives = 32/61 (52.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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