CsGy4G002355 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAAAACAGGGAAGAAGAGTTAAAGACGTTTAAGAGCTTGGGAACATGTGAGCAATTGGTGGAGGCATGCTGGAGTTCAGACTGGAAACCTCATGGCGCAGAAGGTTCTTTCTACAGCTTGTACATTTACTTAATTCATTTCTTCCATTCAACTATTCTTTTTATTCAACCAGTGGCAAAGATAAATTTTGTTCTCATTGCTTTTAATATTGGTGTTGAATGAAAATTACACATCTTTCTGTATAAATATTAGGTAAGGTTTCAAGATGCACTCTGGCACTCATTTATGAAAAGGCACAAACATTGAAGCATTCCCATTACTTTGACGTTTGTGTCTTTTAG ATGGAGCAAAACAGGGAAGAAGAGTTAAAGACGTTTAAGAGCTTGGGAACATGTGAGCAATTGGTGGAGGCATGCTGGAGTTCAGACTGGAAACCTCATGGCGCAGAAGGTAAGGTTTCAAGATGCACTCTGGCACTCATTTATGAAAAGGCACAAACATTGAAGCATTCCCATTACTTTGACGTTTGTGTCTTTTAG ATGGAGCAAAACAGGGAAGAAGAGTTAAAGACGTTTAAGAGCTTGGGAACATGTGAGCAATTGGTGGAGGCATGCTGGAGTTCAGACTGGAAACCTCATGGCGCAGAAGGTAAGGTTTCAAGATGCACTCTGGCACTCATTTATGAAAAGGCACAAACATTGAAGCATTCCCATTACTTTGACGTTTGTGTCTTTTAG MEQNREEELKTFKSLGTCEQLVEACWSSDWKPHGAEGKVSRCTLALIYEKAQTLKHSHYFDVCVF* Homology
BLAST of CsGy4G002355 vs. NCBI nr
Match: KGN52980.1 (hypothetical protein Csa_014600 [Cucumis sativus]) HSP 1 Score: 141 bits (356), Expect = 1.93e-42 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of CsGy4G002355 vs. NCBI nr
Match: XP_022151346.1 (DEAD-box ATP-dependent RNA helicase 10-like [Momordica charantia]) HSP 1 Score: 55.1 bits (131), Expect = 1.02e-06 Identity = 29/48 (60.42%), Postives = 31/48 (64.58%), Query Frame = 0
BLAST of CsGy4G002355 vs. NCBI nr
Match: KAG6605763.1 (DEAD-box ATP-dependent RNA helicase 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 53.5 bits (127), Expect = 3.61e-06 Identity = 28/48 (58.33%), Postives = 30/48 (62.50%), Query Frame = 0
BLAST of CsGy4G002355 vs. NCBI nr
Match: XP_022957788.1 (DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita moschata] >XP_022957789.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita moschata] >XP_022995218.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita maxima] >XP_022995219.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita maxima] >KAG7035728.1 DEAD-box ATP-dependent RNA helicase 10 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 53.5 bits (127), Expect = 3.61e-06 Identity = 28/48 (58.33%), Postives = 30/48 (62.50%), Query Frame = 0
BLAST of CsGy4G002355 vs. NCBI nr
Match: XP_023534735.1 (DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 53.5 bits (127), Expect = 3.61e-06 Identity = 28/48 (58.33%), Postives = 30/48 (62.50%), Query Frame = 0
BLAST of CsGy4G002355 vs. ExPASy TrEMBL
Match: A0A0A0KTP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G008830 PE=4 SV=1) HSP 1 Score: 141 bits (356), Expect = 9.33e-43 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of CsGy4G002355 vs. ExPASy TrEMBL
Match: A0A6J1DED3 (DEAD-box ATP-dependent RNA helicase 10-like OS=Momordica charantia OX=3673 GN=LOC111019308 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.96e-07 Identity = 29/48 (60.42%), Postives = 31/48 (64.58%), Query Frame = 0
BLAST of CsGy4G002355 vs. ExPASy TrEMBL
Match: A0A6J1K797 (DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490827 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.75e-06 Identity = 28/48 (58.33%), Postives = 30/48 (62.50%), Query Frame = 0
BLAST of CsGy4G002355 vs. ExPASy TrEMBL
Match: A0A6J1H304 (DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita moschata OX=3662 GN=LOC111459226 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.75e-06 Identity = 28/48 (58.33%), Postives = 30/48 (62.50%), Query Frame = 0
BLAST of CsGy4G002355 vs. ExPASy TrEMBL
Match: A0A5D3C6L0 (DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00720 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.75e-06 Identity = 28/48 (58.33%), Postives = 31/48 (64.58%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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