
CsGy4G001980 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTTGTGGTGTTACAAGAACTGGTGGCACCCACTTGAATGAATCAGAAGATTCCCATTTCCCAATCCCCACTTTAAAAAACTATAAACTTTGTTAATAATCAAGAAAGTTATGATTACCCATTAATTATTTTTTTTCCTTTTTATGTTTCCGATGATCATTTTCTATTGGTTCGAAGATTATTTAGCAATGGAGTTATTAGTTTCAGTAAGTTAGTGGAAGTGAGATCGAAATGTTGTGCAGAAGAATCTCCAGCAATGCTGATTCTGGATCAGCTCCAGTGTACCTCAATGTGTACGATCTCACCCCCATTAATGGCTATGCATATTGGTTCGGCCTCGGTGTTTATCATTCTGGTCTTCAAGGTTTGTTCTTCTACTAATTCATCGCTTTCTCTGCTGTTTAGATCTGCATTTCTGTTGCTTAATCTGGATTTGGTAATTGTTGAATGACGAGTCCAGTTTTTATGAGTTATGTTTTCTGTTTGGTTAGTGAGGGAAACAGGGGGGAAATTTGAATGTAATTCTAGGTTTTTGCTTTATGCATCATTGTTTGTTGTTCTCTTACTCTTGTAGAATTTTAATTGGTTCTGTTTGGGTGGGGAGAAAATGATGGAAAAATAGATGAACTTACTAGGTTTTTGGTTTTACTTCACTTTTTTTTCATTGTTCTTTAAGTATAATTTGCTCCTGCTGATTTCTGGACCTGCATTTCGACATTCTGTTTGGATGGTGAGAAAATGATGGGAAATTAGACGAACTTCTAGGTTTTTACCCTTAGTTCACTTAATTTGTTTGTTCTTTAAGTATAATTTGCTCTAAGACAAACTTTCCAATTGTTATCTGGATCTCCACTGCGAGGGATTCTCTGTCTGGCTGGTGAGAAAATGGAGGAAAATTGGATAAACTTGAAGGGATTTTCATTTTACCTTTTACCTTTGTTCTTGAACTATAACTTTCCTTTTGGAAAATCTTCCCTAGTGTTTGGGTGTTGTTGAGAAAATTAAGGGAAATTGAAACATTTTCTATCTGAAACACTAAATGTTATGGGATTATTGTAATGCAGTTCATGGAATTGAATTTGCATTTGGAGCTCATGAATATCCAAGTACAGGGATATTTGAAGGAGAACCAAAGCAATGTGAAGGATTCAAGTTCAGAAAATCAATTTTGATTGGGCAAACAGACTTGAGTGAAGCAGAAGTGAAGTCATTAATGGAAGAACTTGGTAAAGACTACAGAGGAAATGCTTATAATTTAATCACAAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAGCTCACTGGAAATCCCATCCCAAGTTGGGTCAATCGCCTTGCTAGAATTGGTAACATCAAATCCCACCCTTCATTTCCACTTTTCATCTAAATTGACATCTCCTTTTTCACTTCTTGCTGTTTTCTTTTTCTTTTTTCTTTTTCCTGTTTATGTCTCTGAATGCTGATGTTGAACTTTAGTGCTTTTGTATTTCTCTACTTTTAAATATTTTATTATCAGTCCCCACAACTTTTACATTAACCTCTTTATTAATTTAATAAAGGTCAAAATAATCATTCTTATACTTCAACTTAACTAAATTTTTCATGCAAATACATAAAAAATGATATTTGAGACCTTTAGTAAATTATTTAGAAAACATTGAATGTGTTAACCAAATTATAAAACTAAAAAGCTACTATAATCTTTTTCCCTCTGCTTGAAATTTGGAAACATGAATAACAACAAGACTACTGATATTATGTAGATTGTTAACCAATAGAATACTTGTTTTTAATCATTTTAAATTAATTTAGTATTTGGTATTACGCTTTTCAAATTCAATTTTCATATAATCAAAATTGATTTTGGACTATAAAAGCATGTTTCATATTGATTTGAAATGCAGGGTGGATTTGCAACTGTGTGTTACCAGCAACATTGAACTCCACAAAATTTGGTCAAAACAGAGTTCAAAAGAAAACAAATGAAGAAAAGCAAGAAAAAGGAGTAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATTGATGCCAAAAGTTCAAACGGTTGAAATTTCAGGTTCTAATTCTAATTCCTCTTCTTCTTCTTCGTCTTCTCCAATTACTCTCCGCAGAGGCAGAAGCAGAACAAGACGCCCTCGCCTTCCAACTTCACCATTAATTCCCACCTCAAATTGTTGAAGATCATCAGTAGTTTGGTTAAATTGCATATTTAGTCACCATAGGTCGAAAAAAGTTAGAATTTAGTCCGTTAGAGTTTAAAACTTATGGACTAACTTTTAACTTTCTTCGAATGAAGGGATTAAGTTTGTCATTTAATCTTTGAGTCGTTAGTTGCTCCTCGTTTTCTCTCACAACAAAGGAAAGAAAGAAGAACATTTTTGGGGTATATGAGTGATTATGTAAATTGTGTACTATTAGGGAAAGTGGGTTGTTTGTCCCTCAAATGTTTTCTTTTTCCACCATTTATGTATCCATTTTCTTGGATGTTGTTGAGCTACCATTGAAGTGGTAATTATAGGCTGAGATGTGGATTGTAATCCAAATTAAATTTGCAAATATGGCCCAATGGGAATGCTTTCTAGAGGGGTCAATTGCTTTTTCTTCAAGGCTAAGTACAATTTTGATTAATGCCCTAAAGATTTGTTCTATTTCATTTCTAAAAGTTTCACAAATGTTATATTCATAAT ATGGAGTTTGTGGTGTTACAAGAACTGGTGGCACCCACTTGAATGAATCAGAAGATTCCCATTTCCCAATCCCCACTTTAAAAAACTATAAACTTTGTTAATAATCAAGAAAGTTATGATTACCCATTAATTATTTTTTTTCCTTTTTATGTTTCCGATGATCATTTTCTATTGGTTCGAAGATTATTTAGCAATGGAGTTATTAGTTTCAGTAAGTTAGTGGAAGTGAGATCGAAATGTTGTGCAGAAGAATCTCCAGCAATGCTGATTCTGGATCAGCTCCAGTGTACCTCAATGTGTACGATCTCACCCCCATTAATGGCTATGCATATTGGTTCGGCCTCGGTGTTTATCATTCTGGTCTTCAAGTTCATGGAATTGAATTTGCATTTGGAGCTCATGAATATCCAAGTACAGGGATATTTGAAGGAGAACCAAAGCAATGTGAAGGATTCAAGTTCAGAAAATCAATTTTGATTGGGCAAACAGACTTGAGTGAAGCAGAAGTGAAGTCATTAATGGAAGAACTTGGTAAAGACTACAGAGGAAATGCTTATAATTTAATCACAAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAGCTCACTGGAAATCCCATCCCAAGTTGGGTCAATCGCCTTGCTAGAATTGGGTGGATTTGCAACTGTGTGTTACCAGCAACATTGAACTCCACAAAATTTGGTCAAAACAGAGTTCAAAAGAAAACAAATGAAGAAAAGCAAGAAAAAGGAGTAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATTGATGCCAAAAGTTCAAACGGTTGAAATTTCAGGTTCTAATTCTAATTCCTCTTCTTCTTCTTCGTCTTCTCCAATTACTCTCCGCAGAGGCAGAAGCAGAACAAGACGCCCTCGCCTTCCAACTTCACCATTAATTCCCACCTCAAATTGTTGAAGATCATCAGTAGTTTGGTTAAATTGCATATTTAGTCACCATAGGTCGAAAAAAGTTAGAATTTAGTCCGTTAGAGTTTAAAACTTATGGACTAACTTTTAACTTTCTTCGAATGAAGGGATTAAGTTTGTCATTTAATCTTTGAGTCGTTAGTTGCTCCTCGTTTTCTCTCACAACAAAGGAAAGAAAGAAGAACATTTTTGGGGTATATGAGTGATTATGTAAATTGTGTACTATTAGGGAAAGTGGGTTGTTTGTCCCTCAAATGTTTTCTTTTTCCACCATTTATGTATCCATTTTCTTGGATGTTGTTGAGCTACCATTGAAGTGGTAATTATAGGCTGAGATGTGGATTGTAATCCAAATTAAATTTGCAAATATGGCCCAATGGGAATGCTTTCTAGAGGGGTCAATTGCTTTTTCTTCAAGGCTAAGTACAATTTTGATTAATGCCCTAAAGATTTGTTCTATTTCATTTCTAAAAGTTTCACAAATGTTATATTCATAAT ATGTTGTGCAGAAGAATCTCCAGCAATGCTGATTCTGGATCAGCTCCAGTGTACCTCAATGTGTACGATCTCACCCCCATTAATGGCTATGCATATTGGTTCGGCCTCGGTGTTTATCATTCTGGTCTTCAAGTTCATGGAATTGAATTTGCATTTGGAGCTCATGAATATCCAAGTACAGGGATATTTGAAGGAGAACCAAAGCAATGTGAAGGATTCAAGTTCAGAAAATCAATTTTGATTGGGCAAACAGACTTGAGTGAAGCAGAAGTGAAGTCATTAATGGAAGAACTTGGTAAAGACTACAGAGGAAATGCTTATAATTTAATCACAAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAGCTCACTGGAAATCCCATCCCAAGTTGGGTCAATCGCCTTGCTAGAATTGGGTGGATTTGCAACTGTGTGTTACCAGCAACATTGAACTCCACAAAATTTGGTCAAAACAGAGTTCAAAAGAAAACAAATGAAGAAAAGCAAGAAAAAGGAGTAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATTGATGCCAAAAGTTCAAACGGTTGAAATTTCAGGTTCTAATTCTAATTCCTCTTCTTCTTCTTCGTCTTCTCCAATTACTCTCCGCAGAGGCAGAAGCAGAACAAGACGCCCTCGCCTTCCAACTTCACCATTAATTCCCACCTCAAATTGTTGA MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEEKKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSNC* Homology
BLAST of CsGy4G001980 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 4.2e-50 Identity = 87/193 (45.08%), Postives = 131/193 (67.88%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.7e-31 Identity = 72/168 (42.86%), Postives = 105/168 (62.50%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30 Identity = 73/170 (42.94%), Postives = 108/170 (63.53%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy Swiss-Prot
Match: Q9BSY9 (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.2e-30 Identity = 70/169 (41.42%), Postives = 107/169 (63.31%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy Swiss-Prot
Match: A3QRX8 (Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.2e-30 Identity = 70/169 (41.42%), Postives = 107/169 (63.31%), Query Frame = 0
BLAST of CsGy4G001980 vs. NCBI nr
Match: XP_004152173.1 (deSI-like protein At4g17486 [Cucumis sativus] >KGN52942.1 hypothetical protein Csa_015067 [Cucumis sativus]) HSP 1 Score: 467 bits (1201), Expect = 8.95e-166 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CsGy4G001980 vs. NCBI nr
Match: XP_008454170.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis melo]) HSP 1 Score: 439 bits (1128), Expect = 1.12e-154 Identity = 225/235 (95.74%), Postives = 231/235 (98.30%), Query Frame = 0
BLAST of CsGy4G001980 vs. NCBI nr
Match: XP_038881748.1 (deSI-like protein At4g17486 [Benincasa hispida] >XP_038881756.1 deSI-like protein At4g17486 [Benincasa hispida]) HSP 1 Score: 418 bits (1074), Expect = 1.59e-146 Identity = 213/232 (91.81%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of CsGy4G001980 vs. NCBI nr
Match: KAG6581964.1 (DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 402 bits (1032), Expect = 4.46e-140 Identity = 204/235 (86.81%), Postives = 215/235 (91.49%), Query Frame = 0
BLAST of CsGy4G001980 vs. NCBI nr
Match: XP_023528854.1 (deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo] >XP_023528855.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397 bits (1019), Expect = 3.97e-138 Identity = 202/233 (86.70%), Postives = 213/233 (91.42%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy TrEMBL
Match: A0A0A0KX01 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006490 PE=3 SV=1) HSP 1 Score: 467 bits (1201), Expect = 4.33e-166 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy TrEMBL
Match: A0A1S3BXH1 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103494655 PE=3 SV=1) HSP 1 Score: 439 bits (1128), Expect = 5.42e-155 Identity = 225/235 (95.74%), Postives = 231/235 (98.30%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy TrEMBL
Match: A0A6J1DIV3 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111020936 PE=3 SV=1) HSP 1 Score: 394 bits (1013), Expect = 1.47e-137 Identity = 203/235 (86.38%), Postives = 215/235 (91.49%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy TrEMBL
Match: A0A6J1GTY9 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111457516 PE=3 SV=1) HSP 1 Score: 392 bits (1008), Expect = 8.49e-137 Identity = 201/235 (85.53%), Postives = 211/235 (89.79%), Query Frame = 0
BLAST of CsGy4G001980 vs. ExPASy TrEMBL
Match: A0A6J1J0C0 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111480086 PE=3 SV=1) HSP 1 Score: 391 bits (1005), Expect = 2.71e-136 Identity = 202/235 (85.96%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of CsGy4G001980 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 302.4 bits (773), Expect = 3.3e-82 Identity = 157/232 (67.67%), Postives = 182/232 (78.45%), Query Frame = 0
BLAST of CsGy4G001980 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 233.8 bits (595), Expect = 1.4e-61 Identity = 129/234 (55.13%), Postives = 152/234 (64.96%), Query Frame = 0
BLAST of CsGy4G001980 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). ) HSP 1 Score: 229.9 bits (585), Expect = 2.1e-60 Identity = 121/237 (51.05%), Postives = 165/237 (69.62%), Query Frame = 0
BLAST of CsGy4G001980 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 220.7 bits (561), Expect = 1.2e-57 Identity = 117/234 (50.00%), Postives = 151/234 (64.53%), Query Frame = 0
BLAST of CsGy4G001980 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 215.7 bits (548), Expect = 4.0e-56 Identity = 95/169 (56.21%), Postives = 126/169 (74.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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