CsGy4G001280 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G001280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Glutaredoxin
Location	Gy14Chr4: 779916 .. 783530 (-)
RNA-Seq Expression	CsGy4G001280
Synteny	CsGy4G001280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATTCAACAATCTCCCATGTGAATAAAAAAGAGTAAACCCTAAGGAGTTATTTTTCTCCATTTCTCAACAAGACATCACCACCAAGTCACGTAGCCAAACTCCTTCACCATCCCCACAACCATATTTCCTTTCTTTTCTTCTCCCTCTCCATCCTGCCGCACTAAATTTTCTTTCTCCTTCAACCTCAAGGTCTGTCCACGTTTTTTCTTCTTTTCTTCTTTTCTTCTTCGCTTTCCTATATCTTTTTTTTTTAACTATCTCAATTTCGGCAATATTGAGCTGTAGCAACGTGTTTGATTCACATTTATTTCATTTCTGGTGGTGTTTTGTTGTAGTATTGTAGCTATCTATGGTTTTCTAGATGATCTGTGTCATTCCATTAACCGTTGAATATTCATGCCTCTTTCTATTACTTGGGTATTCGAAAATTTGTAGTCTTTAAGCTTGTATTCCTTCGTGAGGTGCTGTTTGCTTGTAATTCTTCTATTGGATAATGTGAAAGTCTTAAAATCTTGTTGCTCAAGGAATTTGTATCTGGTTTTTCAGTTTCTCATTGTATCTTGATATATGCCACTACTTGCACATGTTTAAAACCGTACTCCAATTTACTGACTTTTGAACTTGTTGTCTACTTTAGAGTATCTAATTGGGCGCTACTCTTACAATTGGAATGATGGCAAAATCATTATCAAACTTACTCTTCAAGGGCTTGGCAGGTCTGCCTGCTACTCGCACTAGCAGAATAGTACGGTTTGAAAAAATCACACTATCATATATTAGTTTCTGATTCCTATTGTTTTGTTCCGTTGGTTTTAGCTTTTGTCTTGTTTACTTATTTTTTTAGAAGAGAAACAAATTTCATTAATGAATGAAATAGAGGAGTAAGAACTGCCAATACCTAGAGGTGTATTACAATAAAGTTTTCCAATTTGAAGTTAAATAAGTTGAGCTAAGTTAAGGAAAAGCTTGTACTATGCTGATTATATTGTGGTGCCTCATTTTGAACTGTTGATAGGTGGTGCCTGGGTTAAATTATCAGCATGGAATGAGATACTCAACGACAGTACCCAATGAACCTGATACCCATGACGATTTCAAACCTACTAATAAACTTGAGAATTCTGGCCTTTCTTTGAGGGATGTTGTGGAACAGGTATGAATGCTTTTGTTAAAGAACTGATAATATATAGGAAGCATATTTTGATGTGTCTAATCTAGAAGAGCTATGTGCTTTGCCTCTCTTTTCTTGATAAGAGAAAATTTCATGATTAGTTGTACACAAAATGAGAAAGTAACAAAAAGGTCTTCCAGATTCTGCAAAATGTAGAAAGGTTAAATGTTTTCTGGTCTGAGTAGAATGTGGAGAATTTAAGAACCGGTACTAATGGTTTAGAAATACTGACATATTACGGCAACTTTGACTTTATTCTTTTCTAGTTTTTTTATTGGCTATGTTATTTTTAAACTACATTGTAAGGTCTTTAACTCTTCAACATCAGCCTGCCAATATCTATGCTTTCATGGGTATGCAAGTCTCATATCGGCATTATTTTTCATTTTGTATTGTTATCAGGATGTACGACAAAATCCTGTGATGATCTACATGAAAGGGGTGCCGGATGTTCCTCAATGTGGATTTAGTGCTCTTGCTGTTAGAGTGTTGAAGTTATATAGTAAGTGCTCATTGTGTGTGCTTGTCTGTTTTAATGAGTCTATTCTCTTTGGGATAAGCTTTTTCAGGGACATGCCTGTCTGTTCGTTCCCCTGGAACATAAACTGATGGTCTTATAATCCTATGTTTGAGTGAGCCAATATTGTGCCTGTTATGTTTGTTATGTGTGTAACAAGTATATTATATTATAACTATATGCTCTCAATACTTCAAATTACTGGCTGACTGATCGCTAATGTCTACCATTATCTTGCTTCTTTCCAATCCTATCTTTTGCATGAATTTTTTCTGTATGGTCTTTGGTTTTCTAGTTCTTAGGACGAAAATCTGGATCGGCTTTTTAAAATCACAAACTTGCATGCTTTGTACTGTGCCTATCTCTGAATATAAATCCTTGCAGCACCTTTCTATTGCTTCTCATCTTTTTCCACGATTCTAATGTGTTTAAGTTTTGCAGATGTACCTTTGAGTGCTAGAAATATCTTGGAAGACGCTGAACTTAAAAGTGCCGTGAAATCCTTCAGGTATGCTGGCCCGTGGCCCCTTAGATACCGAATTTCCCTCTTCAGGGGTGAAAATTTTCAAATATTTGATTTCCAAAAAATGAAGTCATGGATGTGTAGCGTAGGTATGAACTAATTTCAGACTATGAAATTGTGAATGGCTCACAAATTAGTTATAGTTTGTTTATTTCCAGAAATATAAGCAAAAAATTTATATAAATTAACAATTAAATCGTTTTTACTCTCAAACTAAGCTATGGATGTGGATATTGTTATTAGTATTTGTACTTTATTAGACTCTAATAAAATGGATGTGGATATTATTTGTATATAAATTAATAATTAAATTGTTTTTACTCCAAACTAAGTTATGGATGTGGATATTGTTATTAGTATTTGTACTTTATCAGGCCAAATGGTTAACCATTTTTTCTCTCTCAAGAGCAATTATAAGGATATCGGAGATATCAATAGATATTGAATTTCAATATTGAGCCCCTCAATTTAAGGATTATTTAGGATTATATAGACATGCCGATGGATATTTGCTACTTGACAAATGAAATTATTTCTGAATTTAAACTCGTGACATTGTTGGCTGAAGAAGTAATTGGACGTGTTGTGATTTGAAAATATTTTGGATGGCAGCCATTGGCCAACATTTCCACAGATATTCATAAAAGGAGAGTTTATTGGAGGATCTGATATCATACTCAATCTGCATCAGGTATCCAACTTCTTATACCTTAGTTCACTTCTCATAAGATCCTACATGAACTTAAGGGTTTTCTGTCACTCTCTTTCAAGGTACCTGTGTTAAAATTCAAATCAGTTTAGGGACTAAATTTTTACATTCATTAAAGATTCATTAAAGGATCAAAAATGTTTTTTAACCAACTTTATCCTCAAAGTTCTCTCTGTTGTAATCCTAATAAACTAAAGTTCAAGAACTAAATTGTTACTTTCAAACAGGACTAAAAGTGTTCTTTTAACTAACTTTATTTTCAAAGTGCTCGTGTGATGCATTGCCTTGATATTGTTCTTTGTCATGTGT

mRNA sequence

ATAAAATTCAACAATCTCCCATGTGAATAAAAAAGAGTAAACCCTAAGGAGTTATTTTTCTCCATTTCTCAACAAGACATCACCACCAAGTCACGTAGCCAAACTCCTTCACCATCCCCACAACCATATTTCCTTTCTTTTCTTCTCCCTCTCCATCCTGCCGCACTAAATTTTCTTTCTCCTTCAACCTCAAGAGTATCTAATTGGGCGCTACTCTTACAATTGGAATGATGGCAAAATCATTATCAAACTTACTCTTCAAGGGCTTGGCAGGTCTGCCTGCTACTCGCACTAGCAGAATAGTGGTGCCTGGGTTAAATTATCAGCATGGAATGAGATACTCAACGACAGTACCCAATGAACCTGATACCCATGACGATTTCAAACCTACTAATAAACTTGAGAATTCTGGCCTTTCTTTGAGGGATGTTGTGGAACAGGATGTACGACAAAATCCTGTGATGATCTACATGAAAGGGGTGCCGGATGTTCCTCAATGTGGATTTAGTGCTCTTGCTGTTAGAGTGTTGAAGTTATATAATGTACCTTTGAGTGCTAGAAATATCTTGGAAGACGCTGAACTTAAAAGTGCCGTGAAATCCTTCAGCCATTGGCCAACATTTCCACAGATATTCATAAAAGGAGAGTTTATTGGAGGATCTGATATCATACTCAATCTGCATCAGGTATCCAACTTCTTATACCTTAGTTCACTTCTCATAAGATCCTACATGAACTTAAGGGTTTTCTGTCACTCTCTTTCAAGGTACCTGTGTTAAAATTCAAATCAGTTTAGGGACTAAATTTTTACATTCATTAAAGATTCATTAAAGGATCAAAAATGTTTTTTAACCAACTTTATCCTCAAAGTTCTCTCTGTTGTAATCCTAATAAACTAAAGTTCAAGAACTAAATTGTTACTTTCAAACAGGACTAAAAGTGTTCTTTTAACTAACTTTATTTTCAAAGTGCTCGTGTGATGCATTGCCTTGATATTGTTCTTTGTCATGTGT

Coding sequence (CDS)

ATGATGGCAAAATCATTATCAAACTTACTCTTCAAGGGCTTGGCAGGTCTGCCTGCTACTCGCACTAGCAGAATAGTGGTGCCTGGGTTAAATTATCAGCATGGAATGAGATACTCAACGACAGTACCCAATGAACCTGATACCCATGACGATTTCAAACCTACTAATAAACTTGAGAATTCTGGCCTTTCTTTGAGGGATGTTGTGGAACAGGATGTACGACAAAATCCTGTGATGATCTACATGAAAGGGGTGCCGGATGTTCCTCAATGTGGATTTAGTGCTCTTGCTGTTAGAGTGTTGAAGTTATATAATGTACCTTTGAGTGCTAGAAATATCTTGGAAGACGCTGAACTTAAAAGTGCCGTGAAATCCTTCAGCCATTGGCCAACATTTCCACAGATATTCATAAAAGGAGAGTTTATTGGAGGATCTGATATCATACTCAATCTGCATCAGGTATCCAACTTCTTATACCTTAGTTCACTTCTCATAAGATCCTACATGAACTTAAGGGTTTTCTGTCACTCTCTTTCAAGGTACCTGTGTTAA

Protein sequence

MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLENSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQVSNFLYLSSLLIRSYMNLRVFCHSLSRYLC*

Homology

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BLAST of CsGy4G001280 vs. ExPASy Swiss-Prot
Match: Q8LBK6 (Monothiol glutaredoxin-S15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GRXS15 PE=1 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 9.8e-55
Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHG-MRYSTTVPNEPDTHDDFKPTNKL-E 61
           MA SLS+ L KG+A L A R+SR+    + YQ+G MR+S+TVP++ DTHDDFKPT K+  
Sbjct: 1   MAASLSSRLIKGIANLKAVRSSRLTSASV-YQNGMMRFSSTVPSDSDTHDDFKPTQKVPP 60

Query: 62  NSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAEL 121
           +S  SL+D+VE DV+ NPVMIYMKGVP+ PQCGFS+LAVRVL+ YNVP+S+RNILED EL
Sbjct: 61  DSTDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYNVPISSRNILEDQEL 120

Query: 122 KSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
           K+AVKSFSHWPTFPQIFIKGEFIGGSDIILN+H+
Sbjct: 121 KNAVKSFSHWPTFPQIFIKGEFIGGSDIILNMHK 153

[Close]

BLAST of CsGy4G001280 vs. ExPASy Swiss-Prot
Match: Q0JM76 (Monothiol glutaredoxin-S4, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS4 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 87/166 (52.41%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRT-SRIVVPGL----NYQHGM---------RYSTTVPNEPD 61
           MA+ +S+ L +GL     + T + +  P +    NY  G+           ST V  +PD
Sbjct: 1   MARLMSSALIRGLVRSSCSPTVAAVAQPTIHQFRNYSSGLGGDSTATGDSSSTRVAADPD 60

Query: 62  THDDFKPTNKLENSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVP 121
           TH DF+PT K  +S +S  D+V QD+++NPV+IYMKG PD P+CGFSALAVRVLK Y+VP
Sbjct: 61  THQDFQPTTK--SSNMSFDDIVSQDIKENPVLIYMKGYPDAPRCGFSALAVRVLKQYDVP 120

Query: 122 LSARNILEDAELKSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
           +SAR+IL D +LK +VK+ ++WPTFPQIFIKGEF+GGSDIIL++HQ
Sbjct: 121 ISARDILGDLKLKESVKAHTNWPTFPQIFIKGEFVGGSDIILDMHQ 164

[Close]

BLAST of CsGy4G001280 vs. ExPASy Swiss-Prot
Match: Q0JQ97 (Monothiol glutaredoxin-S1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS1 PE=2 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-40
Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 0


Query: 2   MAKSLSNLLFKGL-----------AGLPATRTSRIVVPGL---NYQHGMRYSTTVPNEPD 61
           MA+ +S  L +GL              PA +  R   PGL   +   G   ST V  +PD
Sbjct: 1   MARLVSTALMRGLVRSSRAPRVAAVSQPAIQQFRNYSPGLGGDSRGSGDSSSTRVAADPD 60

Query: 62  THDDFKPTNKLENSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVP 121
           TH DF+PT+K  +S +S  D+V QD+++NPV+IYMKG P+ P CGFSALAV+VLKLY+VP
Sbjct: 61  THQDFQPTSK--SSNMSFDDIVAQDIKENPVLIYMKGFPESPMCGFSALAVKVLKLYDVP 120

Query: 122 LSARNILEDAELKSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
           +SAR+IL D +LK  VK+ ++WPTFPQIFIKGEF+GGSDIIL++HQ
Sbjct: 121 ISARDILGDLKLKECVKAHTNWPTFPQIFIKGEFVGGSDIILDMHQ 164

[Close]

BLAST of CsGy4G001280 vs. ExPASy Swiss-Prot
Match: Q555C8 (Monothiol glutaredoxin-5, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=grx5 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.6e-20
Identity = 42/97 (43.30%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 57  KLENSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILED 116
           K E+   +L D VE  V ++P ++YMKG+P+ P+CGFS  AVR+L+      ++ N+L++
Sbjct: 30  KSESYKKALED-VETQVAESPCILYMKGIPERPECGFSNTAVRILQAEGAVFTSYNVLKN 89

Query: 117 AELKSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
            +++ AVK F  WPT PQ+++KG+FIGG+DI++ L++
Sbjct: 90  NDMREAVKEFGDWPTIPQLYVKGQFIGGADILMGLYK 125

[Close]

BLAST of CsGy4G001280 vs. ExPASy Swiss-Prot
Match: Q9HDW8 (Monothiol glutaredoxin-5, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=grx5 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.6e-20
Identity = 42/91 (46.15%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 66  RDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNV---PLSARNILEDAELKSA 125
           R  +EQ V+++P++++MKG P  P CGFS  A+++L L NV    L   N+L + EL+  
Sbjct: 26  RQALEQAVKEDPIVLFMKGTPTRPMCGFSLKAIQILSLENVASDKLVTYNVLSNDELREG 85

Query: 126 VKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
           +K FS WPT PQ++I GEF+GGSDI+ ++H+
Sbjct: 86  IKEFSDWPTIPQLYINGEFVGGSDILASMHK 116

[Close]

BLAST of CsGy4G001280 vs. NCBI nr
Match: XP_004152214.1 (monothiol glutaredoxin-S15, mitochondrial isoform X2 [Cucumis sativus] >KGN52871.1 hypothetical protein Csa_014572 [Cucumis sativus])

HSP 1 Score: 309 bits (791), Expect = 3.30e-105
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60
           MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN
Sbjct: 1   MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60

Query: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120
           SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK
Sbjct: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120

Query: 121 SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153

[Close]

BLAST of CsGy4G001280 vs. NCBI nr
Match: XP_031739589.1 (monothiol glutaredoxin-S15, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 303 bits (775), Expect = 1.08e-102
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60
           MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN
Sbjct: 1   MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60

Query: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120
           SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK
Sbjct: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120

Query: 121 SAVKSFS-----HWPTFPQIFIKGEFIGGSDIILNLHQ 153
           SAVKSFS     HWPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 SAVKSFSILDGSHWPTFPQIFIKGEFIGGSDIILNLHQ 158

[Close]

BLAST of CsGy4G001280 vs. NCBI nr
Match: XP_038902692.1 (monothiol glutaredoxin-S15, mitochondrial [Benincasa hispida])

HSP 1 Score: 302 bits (774), Expect = 1.20e-102
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLENS 61
           MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLE+S
Sbjct: 1   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLESS 60

Query: 62  GLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKS 121
           GLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKS
Sbjct: 61  GLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKS 120

Query: 122 AVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           AVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 AVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ 152

[Close]

BLAST of CsGy4G001280 vs. NCBI nr
Match: XP_008454263.1 (PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Cucumis melo])

HSP 1 Score: 302 bits (773), Expect = 1.83e-102
Identity = 149/153 (97.39%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60
           MMAKSLSNLLFKGLAGLPATRTSRI+VPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLE+
Sbjct: 1   MMAKSLSNLLFKGLAGLPATRTSRIMVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLES 60

Query: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120
           SGLSL+DVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK
Sbjct: 61  SGLSLKDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120

Query: 121 SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           SAVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 SAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ 153

[Close]

BLAST of CsGy4G001280 vs. NCBI nr
Match: XP_022956299.1 (monothiol glutaredoxin-S15, mitochondrial [Cucurbita moschata] >XP_022956300.1 monothiol glutaredoxin-S15, mitochondrial [Cucurbita moschata] >XP_023526757.1 monothiol glutaredoxin-S15, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023526758.1 monothiol glutaredoxin-S15, mitochondrial [Cucurbita pepo subsp. pepo] >KAG6581914.1 Monothiol glutaredoxin-S15, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290 bits (742), Expect = 9.37e-98
Identity = 142/152 (93.42%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLENS 61
           MAKSLS+LLFKGLAGLPATRTSRIVVPG NYQHGMRYSTTVPN+PDTHDDFKPTNKLENS
Sbjct: 1   MAKSLSSLLFKGLAGLPATRTSRIVVPGFNYQHGMRYSTTVPNDPDTHDDFKPTNKLENS 60

Query: 62  GLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKS 121
            LSLRDVVEQDV+QNPVMIYMKGVPD PQCGFS+LAVRVL LYNVPLSARNILEDAELK+
Sbjct: 61  SLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNLYNVPLSARNILEDAELKN 120

Query: 122 AVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           AVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 AVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ 152

[Close]

BLAST of CsGy4G001280 vs. ExPASy TrEMBL
Match: A0A0A0KYD9 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004820 PE=3 SV=1)

HSP 1 Score: 309 bits (791), Expect = 1.60e-105
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60
           MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN
Sbjct: 1   MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60

Query: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120
           SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK
Sbjct: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120

Query: 121 SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153

[Close]

BLAST of CsGy4G001280 vs. ExPASy TrEMBL
Match: A0A1S3BXP4 (monothiol glutaredoxin-S15, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494718 PE=3 SV=1)

HSP 1 Score: 302 bits (773), Expect = 8.86e-103
Identity = 149/153 (97.39%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MMAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60
           MMAKSLSNLLFKGLAGLPATRTSRI+VPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLE+
Sbjct: 1   MMAKSLSNLLFKGLAGLPATRTSRIMVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLES 60

Query: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120
           SGLSL+DVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK
Sbjct: 61  SGLSLKDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120

Query: 121 SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           SAVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 SAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ 153

[Close]

BLAST of CsGy4G001280 vs. ExPASy TrEMBL
Match: A0A6J1GYM2 (monothiol glutaredoxin-S15, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458037 PE=3 SV=1)

HSP 1 Score: 290 bits (742), Expect = 4.54e-98
Identity = 142/152 (93.42%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLENS 61
           MAKSLS+LLFKGLAGLPATRTSRIVVPG NYQHGMRYSTTVPN+PDTHDDFKPTNKLENS
Sbjct: 1   MAKSLSSLLFKGLAGLPATRTSRIVVPGFNYQHGMRYSTTVPNDPDTHDDFKPTNKLENS 60

Query: 62  GLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKS 121
            LSLRDVVEQDV+QNPVMIYMKGVPD PQCGFS+LAVRVL LYNVPLSARNILEDAELK+
Sbjct: 61  SLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNLYNVPLSARNILEDAELKN 120

Query: 122 AVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           AVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 AVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ 152

[Close]

BLAST of CsGy4G001280 vs. ExPASy TrEMBL
Match: A0A6J1IZC6 (monothiol glutaredoxin-S15, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479846 PE=3 SV=1)

HSP 1 Score: 286 bits (732), Expect = 1.51e-96
Identity = 140/152 (92.11%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLENS 61
           MAKSLS+LLFKGLAGLPATRT+RIVVPG NYQHGMRYSTTVPN+PDTHDDFKPTNKLENS
Sbjct: 1   MAKSLSSLLFKGLAGLPATRTNRIVVPGFNYQHGMRYSTTVPNDPDTHDDFKPTNKLENS 60

Query: 62  GLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKS 121
            LSLRDVVE DV+QNPVMIYMKGVPD PQCGFS+LAVRVL LYNVPLSARNILEDAELK+
Sbjct: 61  SLSLRDVVELDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNLYNVPLSARNILEDAELKN 120

Query: 122 AVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           AVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 AVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ 152

[Close]

BLAST of CsGy4G001280 vs. ExPASy TrEMBL
Match: A0A6J1DJ75 (monothiol glutaredoxin-S15, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021023 PE=3 SV=1)

HSP 1 Score: 273 bits (697), Expect = 3.15e-91
Identity = 134/152 (88.16%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLENS 61
           MAKSLSNLLFKGLAGLPA R+SR+V PG  YQHGMRYST+VPN+PDTH+DFKPTNKLE+S
Sbjct: 1   MAKSLSNLLFKGLAGLPAARSSRMV-PGFYYQHGMRYSTSVPNDPDTHEDFKPTNKLESS 60

Query: 62  GLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKS 121
           G+SL+DVVEQDV+QNPVMIYMKGVPD+PQCGFSALAVRVL LYNVPLSARNILE+ ELKS
Sbjct: 61  GISLKDVVEQDVQQNPVMIYMKGVPDLPQCGFSALAVRVLNLYNVPLSARNILENVELKS 120

Query: 122 AVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 153
           AVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ
Sbjct: 121 AVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ 151

[Close]

BLAST of CsGy4G001280 vs. TAIR 10
Match: AT3G15660.1 (glutaredoxin 4 )

HSP 1 Score: 214.5 bits (545), Expect = 7.0e-56
Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHG-MRYSTTVPNEPDTHDDFKPTNKL-E 61
           MA SLS+ L KG+A L A R+SR+    + YQ+G MR+S+TVP++ DTHDDFKPT K+  
Sbjct: 1   MAASLSSRLIKGIANLKAVRSSRLTSASV-YQNGMMRFSSTVPSDSDTHDDFKPTQKVPP 60

Query: 62  NSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAEL 121
           +S  SL+D+VE DV+ NPVMIYMKGVP+ PQCGFS+LAVRVL+ YNVP+S+RNILED EL
Sbjct: 61  DSTDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYNVPISSRNILEDQEL 120

Query: 122 KSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
           K+AVKSFSHWPTFPQIFIKGEFIGGSDIILN+H+
Sbjct: 121 KNAVKSFSHWPTFPQIFIKGEFIGGSDIILNMHK 153

[Close]

BLAST of CsGy4G001280 vs. TAIR 10
Match: AT3G15660.2 (glutaredoxin 4 )

HSP 1 Score: 214.5 bits (545), Expect = 7.0e-56
Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHG-MRYSTTVPNEPDTHDDFKPTNKL-E 61
           MA SLS+ L KG+A L A R+SR+    + YQ+G MR+S+TVP++ DTHDDFKPT K+  
Sbjct: 1   MAASLSSRLIKGIANLKAVRSSRLTSASV-YQNGMMRFSSTVPSDSDTHDDFKPTQKVPP 60

Query: 62  NSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAEL 121
           +S  SL+D+VE DV+ NPVMIYMKGVP+ PQCGFS+LAVRVL+ YNVP+S+RNILED EL
Sbjct: 61  DSTDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYNVPISSRNILEDQEL 120

Query: 122 KSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
           K+AVKSFSHWPTFPQIFIKGEFIGGSDIILN+H+
Sbjct: 121 KNAVKSFSHWPTFPQIFIKGEFIGGSDIILNMHK 153

[Close]

BLAST of CsGy4G001280 vs. TAIR 10
Match: AT4G04950.1 (thioredoxin family protein )

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-20
Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 64  SLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKSAV 123
           SL D ++  +  + VM++MKG PD P+CGFS+  V+ L+  NV   + +IL D E++  +
Sbjct: 389 SLEDRLKALINSSEVMLFMKGSPDEPKCGFSSKVVKALRGENVSFGSFDILTDEEVRQGI 448

Query: 124 KSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
           K+FS+WPTFPQ++ KGE IGG DII+ L +
Sbjct: 449 KNFSNWPTFPQLYYKGELIGGCDIIMELSE 478

[Close]

BLAST of CsGy4G001280 vs. TAIR 10
Match: AT3G54900.1 (CAX interacting protein 1 )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 57/147 (38.78%), Postives = 78/147 (53.06%), Query Frame = 0


Query: 18  PATRTSRIVVPG--LNYQHGMRYSTTVPNEPDTHD----------DFKPTN-KLENSGLS 77
           P   TS  VV     N  H +R+S    +    H+            KPT  +   S L+
Sbjct: 9   PTLITSVAVVSSSVTNKPHSIRFSLKPTSALVVHNHQLSFYGSNLKLKPTKFRCSASALT 68

Query: 78  --LRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELKSA 137
             L+D +E+ V    V+++MKG  D P CGFS   V++LK  NVP    NILE+  L+  
Sbjct: 69  PQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQG 128

Query: 138 VKSFSHWPTFPQIFIKGEFIGGSDIIL 150
           +K +S+WPTFPQ++I GEF GG DI L
Sbjct: 129 LKEYSNWPTFPQLYIGGEFFGGCDITL 155

[Close]

BLAST of CsGy4G001280 vs. TAIR 10
Match: AT2G38270.1 (CAX-interacting protein 2 )

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 34/92 (36.96%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 65  LRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDA---ELKS 124
           L +++++ V+++ V+ ++KG    PQCGFS   V +L+   V     ++L+D     L+ 
Sbjct: 193 LEELIDRLVKESKVVAFIKGSRSAPQCGFSQRVVGILESQGVDYETVDVLDDEYNHGLRE 252

Query: 125 AVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQ 154
            +K++S+WPTFPQIF+KGE +GG DI+ ++++
Sbjct: 253 TLKNYSNWPTFPQIFVKGELVGGCDILTSMYE 284

The following BLAST results are available for this feature:

BLAST of CsGy4G001280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBK6	9.8e-55	70.13	Monothiol glutaredoxin-S15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
Q0JM76	1.1e-40	52.41	Monothiol glutaredoxin-S4, mitochondrial OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q0JQ97	1.8e-40	53.01	Monothiol glutaredoxin-S1, mitochondrial OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q555C8	4.6e-20	43.30	Monothiol glutaredoxin-5, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=...	[more]
Q9HDW8	4.6e-20	46.15	Monothiol glutaredoxin-5, mitochondrial OS=Schizosaccharomyces pombe (strain 972...	[more]

BLAST of CsGy4G001280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152214.1	3.30e-105	100.00	monothiol glutaredoxin-S15, mitochondrial isoform X2 [Cucumis sativus] >KGN52871...	[more]
XP_031739589.1	1.08e-102	96.84	monothiol glutaredoxin-S15, mitochondrial isoform X1 [Cucumis sativus]	[more]
XP_038902692.1	1.20e-102	98.68	monothiol glutaredoxin-S15, mitochondrial [Benincasa hispida]	[more]
XP_008454263.1	1.83e-102	97.39	PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Cucumis melo]	[more]
XP_022956299.1	9.37e-98	93.42	monothiol glutaredoxin-S15, mitochondrial [Cucurbita moschata] >XP_022956300.1 m...	[more]

BLAST of CsGy4G001280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYD9	1.60e-105	100.00	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G00482...	[more]
A0A1S3BXP4	8.86e-103	97.39	monothiol glutaredoxin-S15, mitochondrial OS=Cucumis melo OX=3656 GN=LOC10349471...	[more]
A0A6J1GYM2	4.54e-98	93.42	monothiol glutaredoxin-S15, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1IZC6	1.51e-96	92.11	monothiol glutaredoxin-S15, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1DJ75	3.15e-91	88.16	monothiol glutaredoxin-S15, mitochondrial OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of CsGy4G001280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15660.1	7.0e-56	70.13	glutaredoxin 4	[more]
AT3G15660.2	7.0e-56	70.13	glutaredoxin 4	[more]
AT4G04950.1	2.8e-20	46.67	thioredoxin family protein	[more]
AT3G54900.1	1.4e-19	38.78	CAX interacting protein 1	[more]
AT2G38270.1	1.2e-15	36.96	CAX-interacting protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 78..142 e-value: 8.1E-17 score: 61.2
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 68..164 e-value: 8.7E-32 score: 111.1
None	No IPR available	PANTHER	PTHR10293:SF66	MONOTHIOL GLUTAREDOXIN-S15, MITOCHONDRIAL	coord: 2..156
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 66..171 score: 21.252048
IPR004480	Monothiol glutaredoxin-related	PANTHER	PTHR10293	GLUTAREDOXIN FAMILY MEMBER	coord: 2..156
IPR033658	Glutaredoxin, PICOT-like	CDD	cd03028	GRX_PICOT_like	coord: 69..153 e-value: 6.02197E-47 score: 146.869
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 65..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G001280.2	CsGy4G001280.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0097573	glutathione oxidoreductase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0046872	metal ion binding