CsGy4G000990 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATATTGTGTGATTTAAAATTTGTGTACCCAAAGGAAATTTACAAATATCATAATCAGCAACCTATGTTTCAAGATTCTCAATTTATAATTGAATTATATTTTTTAGTTCCAAAACCAATTAATGAAATTTAATGCTTATATTATTATTAACACAACACAACATTACTCAATAAATATTCATCTTTCTGAACCACACCCACTGCTTCATCTTCCCCAATTTCACAATTTTAGAAAGAGAGAGAGAGAAGAAGAAGAAGAAATGGATGAAGACGGAGTTTCAGAAAAATGGTACCAAGGGCTAAGACGCTACTGGAAAAGAAAAAACTACAAGAAGCTTAATGGGTCGTCGCGACGCCGGAGGAGGCTAGCCCAGGTCGAGCTTGGGTCCACCCGGAACACCCGGCGGCGCTTCTGGCGAATCAAGATCTCACCCAAGTTCCGATTCTTACGAAAAATTCCATCGCCGAAGAAACTACTCCTCCGTCTCCGTGATGCCTATGTCAACATGATGCTCGGATTCGCCAATTCCCGGGTTTTCAACACCAGCTACGGCGGAGGCGCCGCAGTGTGCGACGGCATTCCTGGTTTCGGACAACGGCTGGCGAAGGAATACGACGAGAAGATGATCCTCGAGATCTATAAATCTGTTGTGGCGGAGCAGCGGGAGATGATCCACCGCCCTGTCGCTGCCGGATCGGCGCCGGAAACCGCTCAATTTAGGTGAAAAAGTTGTGTCCTGTTCGGGAAGGTTTTTTTGGGTGTTTTTTTTTCTTTCAATTTTAGTGCTTCTTATTTAATAATAAATAACAATAATATATATTTCAACGATATTATTTTTCAAAAAGCTTAAAAATAGTTGAATTGACTATGAACTTAGAAATTTGATTAGATTACTAATGAATAAAGCAAATTCGAAATCGAACAAATTCAAACAATCAATAACATAGATGATATTGTAAAAAAGAGTTGAAATGCAACGAAATTCAAGCTCTTACGTAAGTGAATAAATTACATTCCTAGATGAAAGAGCGGGGAGTTCGAATTTTCTAACTTTTTAGTCCAAACGTATACTTTAAAGTCGCAGGAGGAATCTTTCAAATTCTTTACCTA TATATTGTGTGATTTAAAATTTGTGTACCCAAAGGAAATTTACAAATATCATAATCAGCAACCTATGTTTCAAGATTCTCAATTTATAATTGAATTATATTTTTTAGTTCCAAAACCAATTAATGAAATTTAATGCTTATATTATTATTAACACAACACAACATTACTCAATAAATATTCATCTTTCTGAACCACACCCACTGCTTCATCTTCCCCAATTTCACAATTTTAGAAAGAGAGAGAGAGAAGAAGAAGAAGAAATGGATGAAGACGGAGTTTCAGAAAAATGGTACCAAGGGCTAAGACGCTACTGGAAAAGAAAAAACTACAAGAAGCTTAATGGGTCGTCGCGACGCCGGAGGAGGCTAGCCCAGGTCGAGCTTGGGTCCACCCGGAACACCCGGCGGCGCTTCTGGCGAATCAAGATCTCACCCAAGTTCCGATTCTTACGAAAAATTCCATCGCCGAAGAAACTACTCCTCCGTCTCCGTGATGCCTATGTCAACATGATGCTCGGATTCGCCAATTCCCGGGTTTTCAACACCAGCTACGGCGGAGGCGCCGCAGTGTGCGACGGCATTCCTGGTTTCGGACAACGGCTGGCGAAGGAATACGACGAGAAGATGATCCTCGAGATCTATAAATCTGTTGTGGCGGAGCAGCGGGAGATGATCCACCGCCCTGTCGCTGCCGGATCGGCGCCGGAAACCGCTCAATTTAGGTGAAAAAGTTGTGTCCTGTTCGGGAAGGTTTTTTTGGGTGTTTTTTTTTCTTTCAATTTTAGTGCTTCTTATTTAATAATAAATAACAATAATATATATTTCAACGATATTATTTTTCAAAAAGCTTAAAAATAGTTGAATTGACTATGAACTTAGAAATTTGATTAGATTACTAATGAATAAAGCAAATTCGAAATCGAACAAATTCAAACAATCAATAACATAGATGATATTGTAAAAAAGAGTTGAAATGCAACGAAATTCAAGCTCTTACGTAAGTGAATAAATTACATTCCTAGATGAAAGAGCGGGGAGTTCGAATTTTCTAACTTTTTAGTCCAAACGTATACTTTAAAGTCGCAGGAGGAATCTTTCAAATTCTTTACCTA ATGAAATTTAATGCTTATATTATTATTAACACAACACAACATTACTCAATAAATATTCATCTTTCTGAACCACACCCACTGCTTCATCTTCCCCAATTTCACAATTTTAGAAAGAGAGAGAGAGAAGAAGAAGAAGAAATGGATGAAGACGGAGTTTCAGAAAAATGGTACCAAGGGCTAAGACGCTACTGGAAAAGAAAAAACTACAAGAAGCTTAATGGGTCGTCGCGACGCCGGAGGAGGCTAGCCCAGGTCGAGCTTGGGTCCACCCGGAACACCCGGCGGCGCTTCTGGCGAATCAAGATCTCACCCAAGTTCCGATTCTTACGAAAAATTCCATCGCCGAAGAAACTACTCCTCCGTCTCCGTGATGCCTATGTCAACATGATGCTCGGATTCGCCAATTCCCGGGTTTTCAACACCAGCTACGGCGGAGGCGCCGCAGTGTGCGACGGCATTCCTGGTTTCGGACAACGGCTGGCGAAGGAATACGACGAGAAGATGATCCTCGAGATCTATAAATCTGTTGTGGCGGAGCAGCGGGAGATGATCCACCGCCCTGTCGCTGCCGGATCGGCGCCGGAAACCGCTCAATTTAGGTGA MKFNAYIIINTTQHYSINIHLSEPHPLLHLPQFHNFRKREREEEEEMDEDGVSEKWYQGLRRYWKRKNYKKLNGSSRRRRRLAQVELGSTRNTRRRFWRIKISPKFRFLRKIPSPKKLLLRLRDAYVNMMLGFANSRVFNTSYGGGAAVCDGIPGFGQRLAKEYDEKMILEIYKSVVAEQREMIHRPVAAGSAPETAQFR* Homology
BLAST of CsGy4G000990 vs. NCBI nr
Match: KAE8649052.1 (hypothetical protein Csa_015094 [Cucumis sativus]) HSP 1 Score: 394 bits (1012), Expect = 3.71e-138 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsGy4G000990 vs. NCBI nr
Match: XP_004152233.1 (uncharacterized protein LOC101222359 [Cucumis sativus]) HSP 1 Score: 301 bits (772), Expect = 2.84e-102 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CsGy4G000990 vs. NCBI nr
Match: XP_008454303.1 (PREDICTED: uncharacterized protein LOC103494742 [Cucumis melo] >KAA0044403.1 putative carrier protein [Cucumis melo var. makuwa] >TYK03324.1 putative carrier protein [Cucumis melo var. makuwa]) HSP 1 Score: 275 bits (704), Expect = 6.52e-92 Identity = 140/154 (90.91%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsGy4G000990 vs. NCBI nr
Match: XP_038905283.1 (uncharacterized protein LOC120091357 [Benincasa hispida]) HSP 1 Score: 266 bits (680), Expect = 2.95e-88 Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of CsGy4G000990 vs. NCBI nr
Match: XP_022949029.1 (uncharacterized protein LOC111452494 [Cucurbita moschata]) HSP 1 Score: 216 bits (549), Expect = 2.46e-68 Identity = 115/152 (75.66%), Postives = 133/152 (87.50%), Query Frame = 0
BLAST of CsGy4G000990 vs. ExPASy TrEMBL
Match: A0A0A0KTE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002550 PE=4 SV=1) HSP 1 Score: 301 bits (772), Expect = 1.38e-102 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CsGy4G000990 vs. ExPASy TrEMBL
Match: A0A5D3BW14 (Putative carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26762G00010 PE=4 SV=1) HSP 1 Score: 275 bits (704), Expect = 3.16e-92 Identity = 140/154 (90.91%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsGy4G000990 vs. ExPASy TrEMBL
Match: A0A1S3BZ24 (uncharacterized protein LOC103494742 OS=Cucumis melo OX=3656 GN=LOC103494742 PE=4 SV=1) HSP 1 Score: 275 bits (704), Expect = 3.16e-92 Identity = 140/154 (90.91%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsGy4G000990 vs. ExPASy TrEMBL
Match: A0A6J1GBM5 (uncharacterized protein LOC111452494 OS=Cucurbita moschata OX=3662 GN=LOC111452494 PE=4 SV=1) HSP 1 Score: 216 bits (549), Expect = 1.19e-68 Identity = 115/152 (75.66%), Postives = 133/152 (87.50%), Query Frame = 0
BLAST of CsGy4G000990 vs. ExPASy TrEMBL
Match: A0A6J1K8W9 (uncharacterized protein LOC111492739 OS=Cucurbita maxima OX=3661 GN=LOC111492739 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 3.95e-67 Identity = 114/152 (75.00%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of CsGy4G000990 vs. TAIR 10
Match: AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 111.3 bits (277), Expect = 9.1e-25 Identity = 70/133 (52.63%), Postives = 92/133 (69.17%), Query Frame = 0
BLAST of CsGy4G000990 vs. TAIR 10
Match: AT3G62650.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 100.1 bits (248), Expect = 2.1e-21 Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = 0
BLAST of CsGy4G000990 vs. TAIR 10
Match: AT3G62650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.1 bits (248), Expect = 2.1e-21 Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|