Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGAAAAAACACGTTCGGAGGAACGCTAGGGTTCCTTTAAAGTCCTCCAGAACTCTCGAGAAATCAATACATGGAGAAAAACAACAACAAATATTAAGCCCTAAACCGAGATGGAATCGATATTTGTCCTCCCTAGAAGAGCGTATGAAAGCGAAAAAGTATGCCGTGGGAACAAAGCAAGCAGAGAGAGGATAA mRNA sequence ATGGAGAAAAAACACGTTCGGAGGAACGCTAGGGTTCCTTTAAAGTCCTCCAGAACTCTCGAGAAATCAATACATGGAGAAAAACAACAACAAATATTAAGCCCTAAACCGAGATGGAATCGATATTTGTCCTCCCTAGAAGAGCGTATGAAAGCGAAAAAGTATGCCGTGGGAACAAAGCAAGCAGAGAGAGGATAA Coding sequence (CDS) ATGGAGAAAAAACACGTTCGGAGGAACGCTAGGGTTCCTTTAAAGTCCTCCAGAACTCTCGAGAAATCAATACATGGAGAAAAACAACAACAAATATTAAGCCCTAAACCGAGATGGAATCGATATTTGTCCTCCCTAGAAGAGCGTATGAAAGCGAAAAAGTATGCCGTGGGAACAAAGCAAGCAGAGAGAGGATAA Protein sequence MEKKHVRRNARVPLKSSRTLEKSIHGEKQQQILSPKPRWNRYLSSLEERMKAKKYAVGTKQAERG*
Homology
BLAST of CsGy4G000970 vs. NCBI nr
Match: KAE8649051.1 (hypothetical protein Csa_014749 [Cucumis sativus]) HSP 1 Score: 126 bits (316), Expect = 2.47e-36 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
Query: 1 MEKKHVRRNARVPLKSSRTLEKSIHGEKQQQILSPKPRWNRYLSSLEERMKAKKYAVGTK 60
MEKKHVRRNARVPLKSSRTLEKSIHGEKQQQILSPKPRWNRYLSSLEERMKAKKYAVGTK
Sbjct: 1 MEKKHVRRNARVPLKSSRTLEKSIHGEKQQQILSPKPRWNRYLSSLEERMKAKKYAVGTK 60
Query: 61 QAERG 65
QAERG
Sbjct: 61 QAERG 65
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAE8649051.1 | 2.47e-36 | 100.00 | hypothetical protein Csa_014749 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..33 |
Relationships
The following mRNA feature(s) are a part of this gene:
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