CsGy4G000310 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G000310
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 200517 .. 202696 (+)
RNA-Seq ExpressionCsGy4G000310
SyntenyCsGy4G000310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCATTAAATACTCAAAGATTAACTGTTAATCACTCAAAATTCATTTTTTTTAAACTATAGTTTTGAGTGTTTATCATATACTACATCATTTTATATAACAAACACCTTCACGTGGATGTGGGCAAATCATAGTGAAGCTTGAGAGGTTTCTTTGAAGAGAGTAAAGTAGAGAGACAGACGGACCAAATTTTCTTCTTTTCGTTTCTGTAAAATCAAAAGATAAAAAGTAACAGAAGTTTTACTTACCACGTGTGTAATTTCAAAGCAGAAAACGTGGACTCACCTCCTCCATGCATTACAACCCTACCTCAACTTCATGGATCAGCTTTTTCTCCATTCTTGGACCTGCAAATCAGTAAAAATAAGCTCAGGGTCACGGGAGTCGTGTACGACTTCACCCACCACATGTTGTCGACCCCTCTACGACTTTCCCACCATATTTTTCACATTATTTAAAACAATCCAACTTATATTATATTTGAAATCCAATCCTAAGACACCCTACATATGAAAGAGGTTTTTGTTGACAACCTGATTTGTTTTATATATGTTCGACTTGTTAATGACTCAATTTCCTTTTGTACTTAGGAATATCTGTCTTTTAAAATTTTAAATCTAAGAGAAAAGAAAAGAAAACAAGCTAAAATTTATATATATTTTATTTAGTTATAGTAGAAGGATGAAATAACAGAGGAGGGATGTGGAATAATGGAAAGGGGAAGCTCATGGGTTGGGAAGGAATATATGAAAAAAAAATACTCTGCCCTCCAATCTTCAAAAGCATGCTTTAAGGTATATCTTTTTATTAGATTCTATGTATAATTTTCTATAATAAAATTGAGTAAATGATTTGTTTCCTCAAATTAAGATTTAATTCCTTCTGAAAAGATAACTTCAAGTCTTGTTAAGTTTAGGGGAGTCTATATACTACTAAAATACCATATACTTAGCTAAGTTCTTATTAAAGAGAGAGACAATCAGGAGAAGTCTAAACGTTGTAAGTGCTTAAACTCTAAGCACATCCTCTAGGAATCTCTTCAAAAGGAAATAAATTTGTAAAATATATTTTATTGCACATGCTAATATTATATAATAAGAGGTTGGACACAATAGTTGATAGATAATTCCAAACTTGAACACAATAGTTGATATATCTATTATATATTGACAAGTCCCTTGCTATTATTGTTATTTATTCTAGTTGATTTTGAGGATAAGAACTAGGAGTGGTTGAAAAGAGATGATCTATTATTAAAATATAAATTAAATATGTATTGGGATAAGATAGTATTTAGGATTATTCAAACTATACCTTAAAATAATTATATACACTAAGCAGAGATAAATTAAATATGCAAATGAATTATTGAAGCTCTCGCCTTTCACATTTTTTGTTATAAATAGAAGGGAAATACAAAGCATAGGGAGGAAGATAATATATAGAAAGAGAGGAAGGAGAAAAGAAAATAGTAAGAAAATGAAGAGGATGGATAAGAACATTGGTTTGGCCGTGGCCACGATGATGGTGATGATGCTTCTGATTGCTACTGTCGTGGAATCAGCCTCTCCTACCGAGAAGATCACGATGATCGAACTCGTCACCAACCACCATGCTGCCAGTTCTTTTCCACGCAAAATGATGAGAAATGGGAAAGGAAACGGAGTTTGTCCCATAATAGGTCGGCCTTGCAATCCTGAGTACGGCGGCTGTGGCCCTTTCTCCGACACTTGTGCTTGCTACACTGCTGGACATTGTGGAGATTTCGTTGGTTGAAGCTGCACTTTTGTGTTGTATCTTTTTCCTTAGTCTTTCCTGTGTTGCGATGTTTTTCCAAAATAAATATGATGATCTCTCTCTCTTGTGAGATCAATGATAAGTTTATGTAACAAAATCTTATGTTCTTAGATGCACAAAATGGGAGGAGGATTTTCTTTTCTTTTCATTGCTTTCTAAAATATTGAAGCCTTTTATCTTATGACTTAACCTTTAATATAAAAAAAAAATGTTACGACTCACATAAAAATCTACATGTTTGTCTAATTTTATCTCGATGTATTGTAAAAGAAAAAAAAATAATAAATTTTTTTCTATATTTATAAAATATTTTGAACCCTTTATTACAATATTAAATTTTCATCAAGTTTGGTAATGGACAAGGATGGGATTGTCATTTTCCTT

mRNA sequence

ACCATTAAATACTCAAAGATTAACTGTTAATCACTCAAAATTCATTTTTTTTAAACTATAGTTTTGAGTGTTTATCATATACTACATCATTTTATATAACAAACACCTTCACGTGGATGTGGGCAAATCATAGTGAAGCTTGAGAGGTTTCTTTGAAGAGAGTAAAGTAGAGAGACAGACGGACCAAATTTTCTTCTTTTCGTTTCTGTAAAATCAAAAGATAAAAAGTAACAGAAGTTTTACTTACCACGTGTGTAATTTCAAAGCAGAAAACGTGGACTCACCTCCTCCATGCATTACAACCCTACCTCAACTTCATGGATCAGCTTTTTCTCCATTCTTGGACCTGCAAATCAGTAAAAATAAGCTCAGGGTCACGGGAGTCGTGTACGACTTCACCCACCACATGTTGTCGACCCCTCTACGACTTTCCCACCATATTTTTCACATTATTTAAAACAATCCAACTTATATTATATTTGAAATCCAATCCTAAGACACCCTACATATGAAAGAGGTTTTTGTTGACAACCTGATTTGTTTTATATATGTTCGACTTGTTAATGACTCAATTTCCTTTTGTACTTAGGAATATCTGTCTTTTAAAATTTTAAATCTAAGAGAAAAGAAAAGAAAACAAGCTAAAATTTATATATATTTTATTTAGTTATAGTAGAAGGATGAAATAACAGAGGAGGGATGTGGAATAATGGAAAGGGGAAGCTCATGGGTTGGGAAGGAATATATGAAAAAAAAATACTCTGCCCTCCAATCTTCAAAAGCATGCTTTAAGAAGGGAAATACAAAGCATAGGGAGGAAGATAATATATAGAAAGAGAGGAAGGAGAAAAGAAAATAGTAAGAAAATGAAGAGGATGGATAAGAACATTGGTTTGGCCGTGGCCACGATGATGGTGATGATGCTTCTGATTGCTACTGTCGTGGAATCAGCCTCTCCTACCGAGAAGATCACGATGATCGAACTCGTCACCAACCACCATGCTGCCAGTTCTTTTCCACGCAAAATGATGAGAAATGGGAAAGGAAACGGAGTTTGTCCCATAATAGGTCGGCCTTGCAATCCTGAGTACGGCGGCTGTGGCCCTTTCTCCGACACTTGTGCTTGCTACACTGCTGGACATTGTGGAGATTTCGTTGGTTGAAGCTGCACTTTTGTGTTGTATCTTTTTCCTTAGTCTTTCCTGTGTTGCGATGTTTTTCCAAAATAAATATGATGATCTCTCTCTCTTGTGAGATCAATGATAAGTTTATGTAACAAAATCTTATGTTCTTAGATGCACAAAATGGGAGGAGGATTTTCTTTTCTTTTCATTGCTTTCTAAAATATTGAAGCCTTTTATCTTATGACTTAACCTTTAATATAAAAAAAAAATGTTACGACTCACATAAAAATCTACATGTTTGTCTAATTTTATCTCGATGTATTGTAAAAGAAAAAAAAATAATAAATTTTTTTCTATATTTATAAAATATTTTGAACCCTTTATTACAATATTAAATTTTCATCAAGTTTGGTAATGGACAAGGATGGGATTGTCATTTTCCTT

Coding sequence (CDS)

ATGAAGAGGATGGATAAGAACATTGGTTTGGCCGTGGCCACGATGATGGTGATGATGCTTCTGATTGCTACTGTCGTGGAATCAGCCTCTCCTACCGAGAAGATCACGATGATCGAACTCGTCACCAACCACCATGCTGCCAGTTCTTTTCCACGCAAAATGATGAGAAATGGGAAAGGAAACGGAGTTTGTCCCATAATAGGTCGGCCTTGCAATCCTGAGTACGGCGGCTGTGGCCCTTTCTCCGACACTTGTGCTTGCTACACTGCTGGACATTGTGGAGATTTCGTTGGTTGA

Protein sequence

MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKGNGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG*
Homology
[Close]
BLAST of CsGy4G000310 vs. NCBI nr
Match: KGN52762.1 (hypothetical protein Csa_014579 [Cucumis sativus])

HSP 1 Score: 201 bits (511), Expect = 4.51e-65
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG 60
          MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG
Sbjct: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG 60

Query: 61 NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98
          NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG
Sbjct: 61 NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98

[Close]
BLAST of CsGy4G000310 vs. NCBI nr
Match: KAA0044337.1 (hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466.1 hypothetical protein E5676_scaffold655G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (404), Expect = 8.40e-49
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG 60
          MK M++NIG A ATMMVMMLLIATVVESASPTEK  MI+LVT+HHAA SFPRKMMRNGKG
Sbjct: 1  MKSMNRNIG-AAATMMVMMLLIATVVESASPTEK--MIKLVTDHHAAGSFPRKMMRNGKG 60

Query: 61 NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98
          NGVCPI G PCNP YG CGPFSD+CACYTAGHCGDFVG
Sbjct: 61 NGVCPITGWPCNPAYG-CGPFSDSCACYTAGHCGDFVG 94

[Close]
BLAST of CsGy4G000310 vs. NCBI nr
Match: KAA0044336.1 (hypothetical protein E6C27_scaffold46G00610 [Cucumis melo var. makuwa] >TYK29465.1 hypothetical protein E5676_scaffold655G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (351), Expect = 9.84e-41
Identity = 76/96 (79.17%), Postives = 83/96 (86.46%), Query Frame = 0 

Query: 4  MDKNIGLAVATMMVMMLLIATVVESA-SPTEKITMIELVTNHHAASSFPRKMMRNGKGNG 63
          M+KN+G A ATMMVMMLLIATVVESA SPTEK  MIELVT+HHAASSFPRKMMRNGKGNG
Sbjct: 1  MNKNMG-AEATMMVMMLLIATVVESAASPTEK-AMIELVTDHHAASSFPRKMMRNGKGNG 60

Query: 64 VCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98
          VCPI G PC P +G CGP S  CACYT+G+CGD+VG
Sbjct: 61 VCPIRGWPCIPAFG-CGPLSGVCACYTSGYCGDYVG 93

[Close]
BLAST of CsGy4G000310 vs. NCBI nr
Match: KAA0044338.1 (hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa] >TYK29467.1 hypothetical protein E5676_scaffold655G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 3.23e-11
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 0 

Query: 9  GLAVATMMVMML--LIATVVESASPTEKITMIELVTNHHAASSFPRK-MMRNGKGNGVCP 68
          GL+VAT++VMM+  +IAT+ +S   TE +    +V     + +FPRK +M+NG  NGVC 
Sbjct: 9  GLSVATVVVMMVVFMIATLADSTITTENVASGAVVNG--GSHAFPRKNIMKNGDQNGVCL 68

Query: 69 IIGRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97
          + G+ C   +  C      CACYTAGHCGD+V
Sbjct: 69 VKGKACK-SHKDC---PSNCACYTAGHCGDWV 94

[Close]
BLAST of CsGy4G000310 vs. NCBI nr
Match: KGN52763.1 (hypothetical protein Csa_014543 [Cucumis sativus])

HSP 1 Score: 53.1 bits (126), Expect = 1.47e-06
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 0 

Query: 12 VATMMVMML--LIATVVESAS-PTEKITMIELVTNHHAASSFPRK-MMRNGKGNGVCPII 71
          VAT++V+M+  +IAT+ +SA+  TE +    LV     + +FPRK +++NG+ NGVC + 
Sbjct: 11 VATVVVVMVAFMIATLADSATIATENVAAGVLVDG--GSHAFPRKNVVKNGE-NGVCLVK 70

Query: 72 GRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97
          G+ C   +  C      CACYTAGHCGD+V
Sbjct: 71 GKACK-SHKDC---PSDCACYTAGHCGDWV 93

[Close]
BLAST of CsGy4G000310 vs. ExPASy TrEMBL
Match: A0A0A0KWE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1)

HSP 1 Score: 201 bits (511), Expect = 2.18e-65
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG 60
          MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG
Sbjct: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG 60

Query: 61 NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98
          NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG
Sbjct: 61 NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98

[Close]
BLAST of CsGy4G000310 vs. ExPASy TrEMBL
Match: A0A5D3E0N0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00620 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 4.07e-49
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASSFPRKMMRNGKG 60
          MK M++NIG A ATMMVMMLLIATVVESASPTEK  MI+LVT+HHAA SFPRKMMRNGKG
Sbjct: 1  MKSMNRNIG-AAATMMVMMLLIATVVESASPTEK--MIKLVTDHHAAGSFPRKMMRNGKG 60

Query: 61 NGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98
          NGVCPI G PCNP YG CGPFSD+CACYTAGHCGDFVG
Sbjct: 61 NGVCPITGWPCNPAYG-CGPFSDSCACYTAGHCGDFVG 94

[Close]
BLAST of CsGy4G000310 vs. ExPASy TrEMBL
Match: A0A5D3E254 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00610 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 4.76e-41
Identity = 76/96 (79.17%), Postives = 83/96 (86.46%), Query Frame = 0 

Query: 4  MDKNIGLAVATMMVMMLLIATVVESA-SPTEKITMIELVTNHHAASSFPRKMMRNGKGNG 63
          M+KN+G A ATMMVMMLLIATVVESA SPTEK  MIELVT+HHAASSFPRKMMRNGKGNG
Sbjct: 1  MNKNMG-AEATMMVMMLLIATVVESAASPTEK-AMIELVTDHHAASSFPRKMMRNGKGNG 60

Query: 64 VCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFVG 98
          VCPI G PC P +G CGP S  CACYT+G+CGD+VG
Sbjct: 61 VCPIRGWPCIPAFG-CGPLSGVCACYTSGYCGDYVG 93

[Close]
BLAST of CsGy4G000310 vs. ExPASy TrEMBL
Match: A0A5D3E009 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00630 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.56e-11
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 0 

Query: 9  GLAVATMMVMML--LIATVVESASPTEKITMIELVTNHHAASSFPRK-MMRNGKGNGVCP 68
          GL+VAT++VMM+  +IAT+ +S   TE +    +V     + +FPRK +M+NG  NGVC 
Sbjct: 9  GLSVATVVVMMVVFMIATLADSTITTENVASGAVVNG--GSHAFPRKNIMKNGDQNGVCL 68

Query: 69 IIGRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97
          + G+ C   +  C      CACYTAGHCGD+V
Sbjct: 69 VKGKACK-SHKDC---PSNCACYTAGHCGDWV 94

[Close]
BLAST of CsGy4G000310 vs. ExPASy TrEMBL
Match: A0A0A0KT53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.12e-07
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 0 

Query: 12 VATMMVMML--LIATVVESAS-PTEKITMIELVTNHHAASSFPRK-MMRNGKGNGVCPII 71
          VAT++V+M+  +IAT+ +SA+  TE +    LV     + +FPRK +++NG+ NGVC + 
Sbjct: 11 VATVVVVMVAFMIATLADSATIATENVAAGVLVDG--GSHAFPRKNVVKNGE-NGVCLVK 70

Query: 72 GRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97
          G+ C   +  C      CACYTAGHCGD+V
Sbjct: 71 GKACK-SHKDC---PSDCACYTAGHCGDWV 93

The following BLAST results are available for this feature:
BLAST of CsGy4G000310 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy4G000310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52762.14.51e-65100.00hypothetical protein Csa_014579 [Cucumis sativus][more]
KAA0044337.18.40e-4984.69hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466... [more]
KAA0044336.19.84e-4179.17hypothetical protein E6C27_scaffold46G00610 [Cucumis melo var. makuwa] >TYK29465... [more]
KAA0044338.13.23e-1144.57hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa] >TYK29467... [more]
KGN52763.11.47e-0643.33hypothetical protein Csa_014543 [Cucumis sativus][more]
BLAST of CsGy4G000310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWE42.18e-65100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1[more]
A0A5D3E0N04.07e-4984.69Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3E2544.76e-4179.17Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3E0091.56e-1144.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KT537.12e-0743.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1[more]
BLAST of CsGy4G000310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G000310.1CsGy4G000310.1mRNA