CsGy3G040510 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G040510
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	agamous-like MADS-box protein AGL62
Location	Gy14Chr3: 37935435 .. 37936112 (-)
RNA-Seq Expression	CsGy3G040510
Synteny	CsGy3G040510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAATTAAACGCCATTCCGATGAAAAAAACTCTCGGCCGTCAAAAGATAGAAATAAAAAAGTTAGAAAAGAAGAGCAGCAAACAAGTCACGTTTTCGAAACGTCGTGCCGGACTTTTCAAGAAAGCTGGCGAGCTCTCCGTTCTTTGTGGAGCAGAGGTAGCCATTATCGTCTTCTCTCCCAATGATAAGCTTTTTTGTTTCGGTCATCCTGATGTCGATGTGCTTTTGGATCGTTATCTCACCGGAAATTTGTCGCCGCCGAAGCCAGCGGAGAGTTACATTCCTGTAGCGGAGTTTAATCGTGATTTCGCTGATTTTGCATTGGAGTTTGAGGCAGAGAAGAAACGAGCGGCGGAATTGATTCGCGCGGCCGAGGATTCGAGGAAGAACGGCGGATTTTGGTGGCAGGAGGCGGTGGAAGGGTTGCGATTGGAGGAACTGAAAGATTTCCGATCAGCATTGATGGATTTGAGAGCCAAAGTGGCGGAGAGAGTTGAAAAACTGACAGCAGTAAGAATTGGAGGGCCTCTGTTGCCAGCGCTACCGCCGCCGCCGCAGCCGATGACGTCGTCGCCGTTTCATCTCATTGGAAACCACCAAGAATTGCCTCCTCCAACGGCGTTTCATCTCGCCGGAAACCAACGTGTCGCGACGGGGTTAGGGTTTTTCTAG

mRNA sequence

ATGGAGAAATTAAACGCCATTCCGATGAAAAAAACTCTCGGCCGTCAAAAGATAGAAATAAAAAAGTTAGAAAAGAAGAGCAGCAAACAAGTCACGTTTTCGAAACGTCGTGCCGGACTTTTCAAGAAAGCTGGCGAGCTCTCCGTTCTTTGTGGAGCAGAGGTAGCCATTATCGTCTTCTCTCCCAATGATAAGCTTTTTTGTTTCGGTCATCCTGATGTCGATGTGCTTTTGGATCGTTATCTCACCGGAAATTTGTCGCCGCCGAAGCCAGCGGAGAGTTACATTCCTGTAGCGGAGTTTAATCGTGATTTCGCTGATTTTGCATTGGAGTTTGAGGCAGAGAAGAAACGAGCGGCGGAATTGATTCGCGCGGCCGAGGATTCGAGGAAGAACGGCGGATTTTGGTGGCAGGAGGCGGTGGAAGGGTTGCGATTGGAGGAACTGAAAGATTTCCGATCAGCATTGATGGATTTGAGAGCCAAAGTGGCGGAGAGAGTTGAAAAACTGACAGCAGTAAGAATTGGAGGGCCTCTGTTGCCAGCGCTACCGCCGCCGCCGCAGCCGATGACGTCGTCGCCGTTTCATCTCATTGGAAACCACCAAGAATTGCCTCCTCCAACGGCGTTTCATCTCGCCGGAAACCAACGTGTCGCGACGGGGTTAGGGTTTTTCTAG

Coding sequence (CDS)

ATGGAGAAATTAAACGCCATTCCGATGAAAAAAACTCTCGGCCGTCAAAAGATAGAAATAAAAAAGTTAGAAAAGAAGAGCAGCAAACAAGTCACGTTTTCGAAACGTCGTGCCGGACTTTTCAAGAAAGCTGGCGAGCTCTCCGTTCTTTGTGGAGCAGAGGTAGCCATTATCGTCTTCTCTCCCAATGATAAGCTTTTTTGTTTCGGTCATCCTGATGTCGATGTGCTTTTGGATCGTTATCTCACCGGAAATTTGTCGCCGCCGAAGCCAGCGGAGAGTTACATTCCTGTAGCGGAGTTTAATCGTGATTTCGCTGATTTTGCATTGGAGTTTGAGGCAGAGAAGAAACGAGCGGCGGAATTGATTCGCGCGGCCGAGGATTCGAGGAAGAACGGCGGATTTTGGTGGCAGGAGGCGGTGGAAGGGTTGCGATTGGAGGAACTGAAAGATTTCCGATCAGCATTGATGGATTTGAGAGCCAAAGTGGCGGAGAGAGTTGAAAAACTGACAGCAGTAAGAATTGGAGGGCCTCTGTTGCCAGCGCTACCGCCGCCGCCGCAGCCGATGACGTCGTCGCCGTTTCATCTCATTGGAAACCACCAAGAATTGCCTCCTCCAACGGCGTTTCATCTCGCCGGAAACCAACGTGTCGCGACGGGGTTAGGGTTTTTCTAG

Protein sequence

MEKLNAIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQPMTSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF*

Homology

[Close]

BLAST of CsGy3G040510 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.1e-29
Identity = 72/163 (44.17%), Postives = 101/163 (61.96%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68
           +KK+ GRQKIE+ K++ +S+ QVTFSKRR+GLFKKA EL  LCGAEVAI+VFSP  K+F 
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 69  FGHPDVDVLLDRYLTGNLSPP--------KPAESYIPVAEFNRDFADFALEFEAEKKRAA 128
           FGHP+VD ++DR++  N  PP        +       V + N        + E EKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 129 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKV 164
           EL +  E ++  G  WW++ VE L L +L+ F+  L +L+  V
Sbjct: 122 ELKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVV 163

[Close]

BLAST of CsGy3G040510 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 70/159 (44.03%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 10  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCF 69
           K+++GRQKI + K++K+S +QVTFSKRRAGLFKKA EL  LCGAE+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 70  GHPDVDVLLDRYLT-GNLSPPKPAE---SYIPVAEFNRDFADFALEFEAEKKRAAELIRA 129
           GHP V+ +LDRY++  N+S  +  +   S     E N        E E EKK+   +   
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 130 AEDS-RKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKV 164
            ++S R++   WW++ VE + + +L++ + AL +LR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of CsGy3G040510 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-23
Identity = 70/167 (41.92%), Postives = 99/167 (59.28%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68
           +KKTLGR+K+EI K+ K+S+ QVTFSKR+AGLFKKA E   LC A++A+IVFSP  K+F 
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 69  FGHPDVDVLLDRY---LTGNLSPPKPAESY--IPVAEFNRDFADFALEFEAEKKRAAELI 128
           FGHP+VDVLLD +   + G+ +     ESY  + V   N+ + +   E E E+K      
Sbjct: 62  FGHPNVDVLLDHFRGCVVGH-NNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRA 121

Query: 129 RAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKL 171
           +  E   +N   WW ++   L L +       L DL+  V E+  +L
Sbjct: 122 Q-NERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQL 166

[Close]

BLAST of CsGy3G040510 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 62/165 (37.58%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 10  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCF 69
           +K LGR+KIE+ K+  +S+ QVTFSKRR+GLFKK  EL  LC AE+AIIVFSP+ K + F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 70  GHPDVDVLLD----RYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRA 129
           GHP+V+ LLD    R +  N +    + + + +   N    +   E E E++    +++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQ- 122

Query: 130 AEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKL 171
            E   K+   WW+ +   L L +    +  L  L+ +V E+V +L
Sbjct: 123 NERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of CsGy3G040510 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 58/168 (34.52%), Postives = 100/168 (59.52%), Query Frame = 0


Query: 13  LGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCFGHP 72
           +GR+KI+++ ++  +++QVTFSKRR GLFKKA EL+ LC AE+ I+VFSP  K F +G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 73  DVDVLLDRYL----TGNLSPPKPAESYIPVAEFNRDFADFA-LEFEAEKKR---AAELIR 132
           ++D + +R++      +    + + +Y P  +   +  D    E EAEK+R   + E + 
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 133 AAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTA 173
           +A D R      ++E++E L L+EL +++  L  +  ++  +V  L A
Sbjct: 121 SAGDER------FKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of CsGy3G040510 vs. NCBI nr
Match: XP_004147877.3 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN59988.1 hypothetical protein Csa_002516 [Cucumis sativus])

HSP 1 Score: 439 bits (1128), Expect = 5.18e-155
Identity = 222/225 (98.67%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MEKLNAIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60
           MEKLN IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF
Sbjct: 1   MEKLNTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120
           SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFAD ALEFEAEKKRAA
Sbjct: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAA 120

Query: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180
           ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

Query: 181 PALPPPPQPMTSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           PALPPPPQPMTSS FHLIGNHQELPPPTAFHLAGNQRVATGLGFF
Sbjct: 181 PALPPPPQPMTSSSFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225

[Close]

BLAST of CsGy3G040510 vs. NCBI nr
Match: XP_008466532.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 419 bits (1076), Expect = 5.64e-147
Identity = 213/232 (91.81%), Postives = 218/232 (93.97%), Query Frame = 0


Query: 1   MEKLNAIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60
           MEKL+ IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF
Sbjct: 1   MEKLHTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120
           SPNDK+FCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA
Sbjct: 61  SPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120

Query: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180
           ELIRAAEDSRKNGGFWWQEA EG+RLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

Query: 181 PALPPPPQPM-------TSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           PALPPPPQP        +SS FHL GNHQ+LPPP AFHLAGN RVATGLGFF
Sbjct: 181 PALPPPPQPQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATGLGFF 232

[Close]

BLAST of CsGy3G040510 vs. NCBI nr
Match: KAA0041553.1 (agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK19701.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 407 bits (1045), Expect = 2.25e-142
Identity = 207/224 (92.41%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK+FC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 128
           FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

Query: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 188
           SRKNGGFWWQEA EG+RLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ
Sbjct: 121 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

Query: 189 PM-------TSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           P        +SS FHL GNHQ+LPPP AFHLAGN RVATGLGFF
Sbjct: 181 PQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATGLGFF 224

[Close]

BLAST of CsGy3G040510 vs. NCBI nr
Match: XP_038875004.1 (agamous-like MADS-box protein AGL62 [Benincasa hispida])

HSP 1 Score: 367 bits (942), Expect = 1.00e-126
Identity = 186/221 (84.16%), Postives = 195/221 (88.24%), Query Frame = 0


Query: 1   MEKLNAIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60
           MEKL +IPMKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVF
Sbjct: 1   MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVF 60

Query: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120
           SPNDK+FCFGHPDV+ LLDRYL  NLSPPKPAESYIPV EFNRDFAD ALEFE EKKRA 
Sbjct: 61  SPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRAT 120

Query: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180
           +LIRAAEDSRKNG FWWQE VEG+RL+ELK FRSALMDLRA+VAERVEKLTA RIGG LL
Sbjct: 121 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLL 180

Query: 181 PALPPPPQPMTSSPFHLIGNHQELPPPTAFHLAGNQRVATG 221
           PALPPPPQ MTSS FHL GN Q LPPPT F LAGN     G
Sbjct: 181 PALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 221

[Close]

BLAST of CsGy3G040510 vs. NCBI nr
Match: KAG7013413.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362 bits (928), Expect = 1.14e-124
Identity = 186/222 (83.78%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 6   AIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 65
           +IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK
Sbjct: 10  SIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 69

Query: 66  LFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRA 125
           +FCFGHPDVDVLLDRYLTGNLSPPKPAESY+PVAEFNRDFAD  LEFEAEKKRA ELI+A
Sbjct: 70  VFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 129

Query: 126 AEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP 185
           +E+SR +GGFWW+EAVEGLRLEELK+FRS+LMDLRAKVAE+VEKLTAVRIGGPLLPALPP
Sbjct: 130 SEESRNSGGFWWEEAVEGLRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPP 189

Query: 186 PP--QPMTSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           PP  QPMT               P +FHLAGN  VATGLGFF
Sbjct: 190 PPPPQPMT---------------PPSFHLAGNHHVATGLGFF 216

[Close]

BLAST of CsGy3G040510 vs. ExPASy TrEMBL
Match: A0A0A0LE01 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 439 bits (1128), Expect = 2.51e-155
Identity = 222/225 (98.67%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MEKLNAIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60
           MEKLN IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF
Sbjct: 1   MEKLNTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120
           SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFAD ALEFEAEKKRAA
Sbjct: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAA 120

Query: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180
           ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

Query: 181 PALPPPPQPMTSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           PALPPPPQPMTSS FHLIGNHQELPPPTAFHLAGNQRVATGLGFF
Sbjct: 181 PALPPPPQPMTSSSFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225

[Close]

BLAST of CsGy3G040510 vs. ExPASy TrEMBL
Match: A0A1S3CRI8 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 2.73e-147
Identity = 213/232 (91.81%), Postives = 218/232 (93.97%), Query Frame = 0


Query: 1   MEKLNAIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60
           MEKL+ IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF
Sbjct: 1   MEKLHTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120
           SPNDK+FCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA
Sbjct: 61  SPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120

Query: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180
           ELIRAAEDSRKNGGFWWQEA EG+RLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

Query: 181 PALPPPPQPM-------TSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           PALPPPPQP        +SS FHL GNHQ+LPPP AFHLAGN RVATGLGFF
Sbjct: 181 PALPPPPQPQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATGLGFF 232

[Close]

BLAST of CsGy3G040510 vs. ExPASy TrEMBL
Match: A0A5D3D807 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001020 PE=4 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 1.09e-142
Identity = 207/224 (92.41%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK+FC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 128
           FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

Query: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 188
           SRKNGGFWWQEA EG+RLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ
Sbjct: 121 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

Query: 189 PM-------TSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           P        +SS FHL GNHQ+LPPP AFHLAGN RVATGLGFF
Sbjct: 181 PQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATGLGFF 224

[Close]

BLAST of CsGy3G040510 vs. ExPASy TrEMBL
Match: A0A6J1H4M6 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111460353 PE=4 SV=1)

HSP 1 Score: 361 bits (926), Expect = 1.11e-124
Identity = 185/222 (83.33%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 6   AIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 65
           +IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK
Sbjct: 10  SIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 69

Query: 66  LFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRA 125
           +FCFGHPDVDVLLDRYLTGNLSPPKPAESY+PVAEFNRDFAD  LEFEAEKKRA ELI+A
Sbjct: 70  VFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 129

Query: 126 AEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP 185
           +E+SR +GGFWW+EAVEG+RLEELK+FRS+LMDLRAKVAE+VEKLTAVRIGGPLLPALPP
Sbjct: 130 SEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPP 189

Query: 186 PP--QPMTSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           PP  QPMT               P +FHLAGN  VATGLGFF
Sbjct: 190 PPPTQPMT---------------PPSFHLAGNHHVATGLGFF 216

[Close]

BLAST of CsGy3G040510 vs. ExPASy TrEMBL
Match: A0A6J1KVC9 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 PE=4 SV=1)

HSP 1 Score: 359 bits (922), Expect = 4.22e-124
Identity = 182/220 (82.73%), Postives = 196/220 (89.09%), Query Frame = 0


Query: 6   AIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 65
           +IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK
Sbjct: 10  SIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 69

Query: 66  LFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRA 125
           +FCFGHP+VDVLLDRYLTGNLSPPKPAESY+PVAEFNRDFAD  LEFEAEKKRA ELI+A
Sbjct: 70  VFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 129

Query: 126 AEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP 185
           +E+SR +GGFWW+EAVEG+RLEELK+FRS+LMDLRAKVAE+VEKLTAVRIGGPLLPALPP
Sbjct: 130 SEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPP 189

Query: 186 PPQPMTSSPFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225
           PP PM                P +FHLAGN  VATGLGFF
Sbjct: 190 PPPPMM---------------PPSFHLAGNHHVATGLGFF 214

[Close]

BLAST of CsGy3G040510 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-30
Identity = 72/163 (44.17%), Postives = 101/163 (61.96%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68
           +KK+ GRQKIE+ K++ +S+ QVTFSKRR+GLFKKA EL  LCGAEVAI+VFSP  K+F 
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 69  FGHPDVDVLLDRYLTGNLSPP--------KPAESYIPVAEFNRDFADFALEFEAEKKRAA 128
           FGHP+VD ++DR++  N  PP        +       V + N        + E EKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 129 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKV 164
           EL +  E ++  G  WW++ VE L L +L+ F+  L +L+  V
Sbjct: 122 ELKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVV 163

[Close]

BLAST of CsGy3G040510 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-27
Identity = 70/159 (44.03%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 10  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCF 69
           K+++GRQKI + K++K+S +QVTFSKRRAGLFKKA EL  LCGAE+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 70  GHPDVDVLLDRYLT-GNLSPPKPAE---SYIPVAEFNRDFADFALEFEAEKKRAAELIRA 129
           GHP V+ +LDRY++  N+S  +  +   S     E N        E E EKK+   +   
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 130 AEDS-RKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKV 164
            ++S R++   WW++ VE + + +L++ + AL +LR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of CsGy3G040510 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24
Identity = 70/167 (41.92%), Postives = 99/167 (59.28%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68
           +KKTLGR+K+EI K+ K+S+ QVTFSKR+AGLFKKA E   LC A++A+IVFSP  K+F 
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 69  FGHPDVDVLLDRY---LTGNLSPPKPAESY--IPVAEFNRDFADFALEFEAEKKRAAELI 128
           FGHP+VDVLLD +   + G+ +     ESY  + V   N+ + +   E E E+K      
Sbjct: 62  FGHPNVDVLLDHFRGCVVGH-NNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRA 121

Query: 129 RAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKL 171
           +  E   +N   WW ++   L L +       L DL+  V E+  +L
Sbjct: 122 Q-NERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQL 166

[Close]

BLAST of CsGy3G040510 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 105.9 bits (263), Expect = 4.3e-23
Identity = 65/181 (35.91%), Postives = 99/181 (54.70%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68
           ++ T GRQKIE+KK+E +S+ QVTFSKRR GLFKKA EL  L GAE+ +IVFSP  K+F 
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 69  FGHPDVDVLLDRYLTGN--------------LSPPKPAESYIPVAEFNRDFADFALEFEA 128
           FGHP V  L+ R+   N              L   +P  +   +   N    +     E 
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRN---IQYLNNILTEVLANQEK 121

Query: 129 EKKRAAELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVR 176
           EK++   ++   ++SR+  G W+++ V+ L + E     SAL D++ K+   + + + V 
Sbjct: 122 EKQKRM-VLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVN 178

[Close]

BLAST of CsGy3G040510 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 104.8 bits (260), Expect = 9.5e-23
Identity = 62/165 (37.58%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 10  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCF 69
           +K LGR+KIE+ K+  +S+ QVTFSKRR+GLFKK  EL  LC AE+AIIVFSP+ K + F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 70  GHPDVDVLLD----RYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRA 129
           GHP+V+ LLD    R +  N +    + + + +   N    +   E E E++    +++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQ- 122

Query: 130 AEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKL 171
            E   K+   WW+ +   L L +    +  L  L+ +V E+V +L
Sbjct: 123 NERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

The following BLAST results are available for this feature:

BLAST of CsGy3G040510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	5.1e-29	44.17	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	2.4e-26	44.03	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O80807	2.4e-23	41.92	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9LMM8	1.3e-21	37.58	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O64703	1.4e-18	34.52	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of CsGy3G040510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147877.3	5.18e-155	98.67	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN59988.1 hypothetical p...	[more]
XP_008466532.1	5.64e-147	91.81	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
KAA0041553.1	2.25e-142	92.41	agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK19701.1 agamo...	[more]
XP_038875004.1	1.00e-126	84.16	agamous-like MADS-box protein AGL62 [Benincasa hispida]	[more]
KAG7013413.1	1.14e-124	83.78	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of CsGy3G040510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE01	2.51e-155	98.67	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE...	[more]
A0A1S3CRI8	2.73e-147	91.81	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4...	[more]
A0A5D3D807	1.09e-142	92.41	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1H4M6	1.11e-124	83.33	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11146035...	[more]
A0A6J1KVC9	4.22e-124	82.73	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 ...	[more]

BLAST of CsGy3G040510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	3.6e-30	44.17	AGAMOUS-like 62	[more]
AT2G24840.1	1.7e-27	44.03	AGAMOUS-like 61	[more]
AT1G65360.1	1.7e-24	41.92	AGAMOUS-like 23	[more]
AT4G36590.1	4.3e-23	35.91	MADS-box transcription factor family protein	[more]
AT1G01530.1	9.5e-23	37.58	AGAMOUS-like 28	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..129
None	No IPR available	PANTHER	PTHR11945:SF665	AGAMOUS-LIKE MADS-BOX PROTEIN AGL62	coord: 11..176
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 11..176
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 15..35 score: 51.12 coord: 35..50 score: 77.25 coord: 50..71 score: 47.35
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 13..72 e-value: 1.9E-33 score: 127.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 23..69 e-value: 8.7E-24 score: 82.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 15..69
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 13..73 score: 27.235252
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 25..90 e-value: 9.3E-27 score: 94.7
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 14..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G040510.1	CsGy3G040510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity