CsGy3G039200 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G039200
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	B box-type domain-containing protein
Location	Gy14Chr3: 36929645 .. 36930825 (+)
RNA-Seq Expression	CsGy3G039200
Synteny	CsGy3G039200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAAGTGTGAGCTATGTGGGCATCAAGCCAGGATGTTCTGCGAGTCCGATCAAGCTAACCTCTGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAACATTCTCGCACCCTTCTTTGTCATGTGTGCCAGTCGCCGACTCCATGGGCCGCCTCTGGTCGGAAACTTACACCCACCGTTTCTGTGTGTGAGGGATGTGTTCAAGTCCATGACGGTAAATGCGACCAGGAGCGTCGTAGGGAAAACGAGGTGGAAGTTGATGACGGCGATGATTTTGTCGATGATGAAGGATTCGATAGTTATGAGGGAGGTGATAGTGAGGAATACGATGATGGGGAAGAGGATGACGATGAGGAAGAAGACGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCCTATGCATCTTCTTCATCACCACCGCCGCCTCCGACAGTGACTTCTAGCAGCGAGGGTGAGATTTCAGCCGGCGCTGGTGTCGCCTCGAAGCGGATGAGAGAATACGGCGTCGATCTCGATTCCGATGTATGTATTTTTTAGGTTTTGTTTTCTCGCTATTGCCTTTTCTTCTGTGTTATCTTTTTCCTTAGTCTGTGTTGAAGGAATTCGTTCGGGATTTCGGAATTTCTTGTTCATTCATTCGCTCTTCTGGAACCGTTGTTTTGATAAATACATCAAAAATCCACGGTTTTCACTTCTCCAAGTGAATCTGACTCAAGATTTAGACCGAATCATTATGTTATATTACCTTTTTAACCTATGATTTTGATACGAATTGTGACTAATATGCCGATCTGAAACATAGTTTTCATTTTTCTTAGTTGTTAAGTTTCCAGTGATCCAAATAGGGTTCTTAATAATCTTTTACCACTTGAATGCAGGATGAAATCGAGTCTTGTTCTGCACCACCGAGTACAAGGCCATTTTTCAACGACGAAGCAACTTCATCAAGTTCCCTTAGGCCACTAAAGCAAGCAAGAGTTACAGGACCGACCCAATCAATCACATCCACTCCAGATGATGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCGTCTTCCCACCGACATTAACGATGCTTCCAAAATGATCTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA

mRNA sequence

ATGATTAAGTGTGAGCTATGTGGGCATCAAGCCAGGATGTTCTGCGAGTCCGATCAAGCTAACCTCTGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAACATTCTCGCACCCTTCTTTGTCATGTGTGCCAGTCGCCGACTCCATGGGCCGCCTCTGGTCGGAAACTTACACCCACCGTTTCTGTGTGTGAGGGATGTGTTCAAGTCCATGACGGTAAATGCGACCAGGAGCGTCGTAGGGAAAACGAGGTGGAAGTTGATGACGGCGATGATTTTGTCGATGATGAAGGATTCGATAGTTATGAGGGAGGTGATAGTGAGGAATACGATGATGGGGAAGAGGATGACGATGAGGAAGAAGACGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCCTATGCATCTTCTTCATCACCACCGCCGCCTCCGACAGTGACTTCTAGCAGCGAGGGTGAGATTTCAGCCGGCGCTGGTGTCGCCTCGAAGCGGATGAGAGAATACGGCGTCGATCTCGATTCCGATGATGAAATCGAGTCTTGTTCTGCACCACCGAGTACAAGGCCATTTTTCAACGACGAAGCAACTTCATCAAGTTCCCTTAGGCCACTAAAGCAAGCAAGAGTTACAGGACCGACCCAATCAATCACATCCACTCCAGATGATGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCGTCTTCCCACCGACATTAACGATGCTTCCAAAATGATCTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA

Coding sequence (CDS)

ATGATTAAGTGTGAGCTATGTGGGCATCAAGCCAGGATGTTCTGCGAGTCCGATCAAGCTAACCTCTGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAACATTCTCGCACCCTTCTTTGTCATGTGTGCCAGTCGCCGACTCCATGGGCCGCCTCTGGTCGGAAACTTACACCCACCGTTTCTGTGTGTGAGGGATGTGTTCAAGTCCATGACGGTAAATGCGACCAGGAGCGTCGTAGGGAAAACGAGGTGGAAGTTGATGACGGCGATGATTTTGTCGATGATGAAGGATTCGATAGTTATGAGGGAGGTGATAGTGAGGAATACGATGATGGGGAAGAGGATGACGATGAGGAAGAAGACGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCCTATGCATCTTCTTCATCACCACCGCCGCCTCCGACAGTGACTTCTAGCAGCGAGGGTGAGATTTCAGCCGGCGCTGGTGTCGCCTCGAAGCGGATGAGAGAATACGGCGTCGATCTCGATTCCGATGATGAAATCGAGTCTTGTTCTGCACCACCGAGTACAAGGCCATTTTTCAACGACGAAGCAACTTCATCAAGTTCCCTTAGGCCACTAAAGCAAGCAAGAGTTACAGGACCGACCCAATCAATCACATCCACTCCAGATGATGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCGTCTTCCCACCGACATTAACGATGCTTCCAAAATGATCTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA

Protein sequence

MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYDDGEEDDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDSDDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR*

Homology

[Close]

BLAST of CsGy3G039200 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09
Identity = 36/78 (46.15%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 4  CELCGHQARM-FCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKL 63
          C+ CG Q  M +C SD A LC  CD  VH AN L  +HSRTL+C  C +     AS R  
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQ---PASVRCS 64

Query: 64 TPTVSVCEGC-VQVHDGK 80
             VS+C+ C    HDGK
Sbjct: 65 DERVSLCQNCDWSGHDGK 79

[Close]

BLAST of CsGy3G039200 vs. ExPASy Swiss-Prot
Match: Q9SSE5 (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.1e-09
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 4  CELCGHQARM-FCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKL 63
          C+ CG Q  M +C SD A LC  CD  VH AN L  +HSRTL+C  C +     A+ R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 64 TPTVSVCEGC 73
             VS+C+ C
Sbjct: 65 EERVSLCQNC 71

[Close]

BLAST of CsGy3G039200 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.3e-09
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 2  IKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPT 54
          + CELCG  A ++CE+D A LC  CD  VH ANFL  +H R ++C  C+  T
Sbjct: 30 VSCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]

BLAST of CsGy3G039200 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-08
Identity = 32/78 (41.03%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 4  CELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKLT 63
          CELCG +A + C +D A LC  CD K H +NFL A+H R ++C  C+S T    SG  L 
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLLP 64

Query: 64 -PTVSVCEGCVQVHDGKC 81
           P  + C  C +     C
Sbjct: 65 WPPRTTC--CSESSSSSC 80

[Close]

BLAST of CsGy3G039200 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-08
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 3  KCELCG-HQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRK 62
          +C+ CG  +A ++C+SD A LC +CD  VH AN L  +H+R+LLC  C S  P A     
Sbjct: 4  RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKC-SLQPTAV--HC 63

Query: 63 LTPTVSVCEGC 73
          +   VS+C+GC
Sbjct: 64 MNENVSLCQGC 71

[Close]

BLAST of CsGy3G039200 vs. NCBI nr
Match: XP_004146838.1 (zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus] >KGN59860.1 hypothetical protein Csa_002023 [Cucumis sativus])

HSP 1 Score: 532 bits (1370), Expect = 2.89e-190
Identity = 272/274 (99.27%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR
Sbjct: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYDDGEE 120
           KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEE DDGEE
Sbjct: 61  KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEDDDGEE 120

Query: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180
           DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS
Sbjct: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180

Query: 181 DDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV 240
           DDEIESCSAP STRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV
Sbjct: 181 DDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV 240

Query: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
           VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR
Sbjct: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]

BLAST of CsGy3G039200 vs. NCBI nr
Match: XP_008454616.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo] >KAA0036743.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa] >TYJ95810.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa])

HSP 1 Score: 511 bits (1317), Expect = 3.47e-182
Identity = 260/274 (94.89%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           M KCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSR+LLCHVCQSPTPWAASGR
Sbjct: 1   MKKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYDDGEE 120
           KLTPTVSVCEGCV+VHDGKC+Q+RRR+NEVEVDDGDDFVD EGFDSYEGGDS+E DDGE+
Sbjct: 61  KLTPTVSVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGFDSYEGGDSQEDDDGED 120

Query: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180
           DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS
Sbjct: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180

Query: 181 DDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV 240
           DDEIESCSAP STRPFFNDEATSSSSLRPLKQARV GP QS TSTPDDEACKAELKSTAV
Sbjct: 181 DDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAV 240

Query: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
           VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR
Sbjct: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]

BLAST of CsGy3G039200 vs. NCBI nr
Match: XP_038899463.1 (nucleolin [Benincasa hispida])

HSP 1 Score: 464 bits (1195), Expect = 1.94e-163
Identity = 244/284 (85.92%), Postives = 257/284 (90.49%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           M KCELCG QARMFCESDQANLCWDCDEKVHCANFLVAKHSR+LLCHVCQSPTPWAASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCD----QERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYD 120
           KLTPTVSVCEGCV+VH GKC+    QERRR+NE EVD+GD FVD EGFDSYEGGDSEE D
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCERGVYQERRRDNEEEVDEGDGFVDGEGFDSYEGGDSEEDD 120

Query: 121 DGEEDDDE------EEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKR 180
           DG++D+DE      EE+DEDGENQVVPWSYASSSS PPPP  TSSSEGEISA AGVASKR
Sbjct: 121 DGDDDEDEDEEDEEEEEDEDGENQVVPWSYASSSSLPPPPAATSSSEGEISAAAGVASKR 180

Query: 181 MREYGVDLDSDDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEA 240
           MREYGVDLDS+DEIE  SAP  TRPFFNDEATSSSSLRPLKQARVTGPTQS TS PDDEA
Sbjct: 181 MREYGVDLDSEDEIECSSAPQGTRPFFNDEATSSSSLRPLKQARVTGPTQSATSNPDDEA 240

Query: 241 CKAELKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
           CKA++KSTAVVRSIQRLQNRLPT+INDASKMIFGICKMSRDQNR
Sbjct: 241 CKAKIKSTAVVRSIQRLQNRLPTNINDASKMIFGICKMSRDQNR 284

[Close]

BLAST of CsGy3G039200 vs. NCBI nr
Match: XP_022139730.1 (protein BFR2 [Momordica charantia])

HSP 1 Score: 443 bits (1139), Expect = 6.11e-155
Identity = 233/282 (82.62%), Postives = 252/282 (89.36%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           M KCELCG QARMFCESDQANLCWDCDEKVHCANFLVAKHSR+LLCHVCQSPTPW ASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWTASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQ----ERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYD 120
           KLTPTVSVCEGCV+VH GKC+Q    ERRR+NE  VDDGDD  D EGF+SYEGGDSEE D
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEQGAYQERRRDNEDVVDDGDDLEDGEGFESYEGGDSEEDD 120

Query: 121 DGEEDDDEEE----DDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMR 180
           + EE+++EEE    +DEDGENQVVPWSYAS SSPPPPPTVTSSSEGE+SAGAGV SKRMR
Sbjct: 121 EEEEEEEEEEGEEEEDEDGENQVVPWSYASYSSPPPPPTVTSSSEGEVSAGAGVTSKRMR 180

Query: 181 EYGVDLDSDDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACK 240
           +YGVDLDSDDEIES SA   TRPFFNDEATSSSSLRPLKQARVTG +QS ++ PDD ACK
Sbjct: 181 DYGVDLDSDDEIESSSARQGTRPFFNDEATSSSSLRPLKQARVTGRSQSASTIPDDAACK 240

Query: 241 AELKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
            EL+STAVVRSIQRLQ+RLP+DINDASK+IFGICKMSRDQNR
Sbjct: 241 PELESTAVVRSIQRLQSRLPSDINDASKVIFGICKMSRDQNR 282

[Close]

BLAST of CsGy3G039200 vs. NCBI nr
Match: XP_023535120.1 (protein BFR2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438 bits (1126), Expect = 5.23e-153
Identity = 232/279 (83.15%), Postives = 249/279 (89.25%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           M KCELCG QARMFCESDQANLCWDCDE VHCANFLVAKHSR+LLCH CQSPTPWAASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQ----ERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYD 120
           KLTPTVSVCEGCV+VH GKC++    ERRR+NE EVDDGDDF D EGF SYEGGDSEE D
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEEGRYLERRRDNEEEVDDGDDFDDGEGFGSYEGGDSEEDD 120

Query: 121 DGEEDDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGV 180
           D +E+++E+EDDEDGENQVVPWS ASSSSPPPPPTVTSSSEGEIS GAGV SKRMRE  V
Sbjct: 121 DDDEEEEEDEDDEDGENQVVPWSCASSSSPPPPPTVTSSSEGEISTGAGVTSKRMRECDV 180

Query: 181 DLDSDDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQS-ITSTPDDEACKAEL 240
           DL+SDD+IE  SA  STRPFFN+EATSSSS RPLKQARVTGPTQS  T+TPDDEA KA+L
Sbjct: 181 DLESDDDIECSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTPDDEAYKADL 240

Query: 241 KSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
           KS +VVRSIQ+LQNR PTDINDASKMIFGICKMSRDQNR
Sbjct: 241 KSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 279

[Close]

BLAST of CsGy3G039200 vs. ExPASy TrEMBL
Match: A0A0A0LCX6 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850640 PE=4 SV=1)

HSP 1 Score: 532 bits (1370), Expect = 1.40e-190
Identity = 272/274 (99.27%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR
Sbjct: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYDDGEE 120
           KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEE DDGEE
Sbjct: 61  KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEDDDGEE 120

Query: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180
           DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS
Sbjct: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180

Query: 181 DDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV 240
           DDEIESCSAP STRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV
Sbjct: 181 DDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV 240

Query: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
           VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR
Sbjct: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]

BLAST of CsGy3G039200 vs. ExPASy TrEMBL
Match: A0A5D3B734 (Zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00930 PE=4 SV=1)

HSP 1 Score: 511 bits (1317), Expect = 1.68e-182
Identity = 260/274 (94.89%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           M KCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSR+LLCHVCQSPTPWAASGR
Sbjct: 1   MKKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYDDGEE 120
           KLTPTVSVCEGCV+VHDGKC+Q+RRR+NEVEVDDGDDFVD EGFDSYEGGDS+E DDGE+
Sbjct: 61  KLTPTVSVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGFDSYEGGDSQEDDDGED 120

Query: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180
           DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS
Sbjct: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180

Query: 181 DDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV 240
           DDEIESCSAP STRPFFNDEATSSSSLRPLKQARV GP QS TSTPDDEACKAELKSTAV
Sbjct: 181 DDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAV 240

Query: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
           VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR
Sbjct: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]

BLAST of CsGy3G039200 vs. ExPASy TrEMBL
Match: A0A1S3BZT7 (zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103494983 PE=4 SV=1)

HSP 1 Score: 511 bits (1317), Expect = 1.68e-182
Identity = 260/274 (94.89%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           M KCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSR+LLCHVCQSPTPWAASGR
Sbjct: 1   MKKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYDDGEE 120
           KLTPTVSVCEGCV+VHDGKC+Q+RRR+NEVEVDDGDDFVD EGFDSYEGGDS+E DDGE+
Sbjct: 61  KLTPTVSVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGFDSYEGGDSQEDDDGED 120

Query: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180
           DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS
Sbjct: 121 DDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDS 180

Query: 181 DDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAELKSTAV 240
           DDEIESCSAP STRPFFNDEATSSSSLRPLKQARV GP QS TSTPDDEACKAELKSTAV
Sbjct: 181 DDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAV 240

Query: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
           VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR
Sbjct: 241 VRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]

BLAST of CsGy3G039200 vs. ExPASy TrEMBL
Match: A0A6J1CD44 (protein BFR2 OS=Momordica charantia OX=3673 GN=LOC111010576 PE=4 SV=1)

HSP 1 Score: 443 bits (1139), Expect = 2.96e-155
Identity = 233/282 (82.62%), Postives = 252/282 (89.36%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           M KCELCG QARMFCESDQANLCWDCDEKVHCANFLVAKHSR+LLCHVCQSPTPW ASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWTASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQ----ERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYD 120
           KLTPTVSVCEGCV+VH GKC+Q    ERRR+NE  VDDGDD  D EGF+SYEGGDSEE D
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEQGAYQERRRDNEDVVDDGDDLEDGEGFESYEGGDSEEDD 120

Query: 121 DGEEDDDEEE----DDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMR 180
           + EE+++EEE    +DEDGENQVVPWSYAS SSPPPPPTVTSSSEGE+SAGAGV SKRMR
Sbjct: 121 EEEEEEEEEEGEEEEDEDGENQVVPWSYASYSSPPPPPTVTSSSEGEVSAGAGVTSKRMR 180

Query: 181 EYGVDLDSDDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACK 240
           +YGVDLDSDDEIES SA   TRPFFNDEATSSSSLRPLKQARVTG +QS ++ PDD ACK
Sbjct: 181 DYGVDLDSDDEIESSSARQGTRPFFNDEATSSSSLRPLKQARVTGRSQSASTIPDDAACK 240

Query: 241 AELKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
            EL+STAVVRSIQRLQ+RLP+DINDASK+IFGICKMSRDQNR
Sbjct: 241 PELESTAVVRSIQRLQSRLPSDINDASKVIFGICKMSRDQNR 282

[Close]

BLAST of CsGy3G039200 vs. ExPASy TrEMBL
Match: A0A6J1IMI6 (protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111476916 PE=4 SV=1)

HSP 1 Score: 432 bits (1112), Expect = 3.43e-151
Identity = 232/280 (82.86%), Postives = 248/280 (88.57%), Query Frame = 0


Query: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60
           M KCELCG QARMFCESDQANLCWDCDE VHCANFLVAKHSR+LLCH CQSPTPWAASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVQVHDGKCDQ----ERRRENEVEVDDGDDFVDDEGFDSYEGGDSEE-- 120
           KLTPTVSVCEGCV+VH GKC +    ERRR+NE EVDDGDDF D EGF+SYEGGDSEE  
Sbjct: 61  KLTPTVSVCEGCVEVHRGKCGEGRYIERRRDNEEEVDDGDDFDDGEGFESYEGGDSEEDE 120

Query: 121 YDDGEEDDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREY 180
           YDD  E++DEE DDEDGENQVVPWS ASSSSPPPPPTVTSSSEGEIS GAGV SKRMR+ 
Sbjct: 121 YDDELEEEDEE-DDEDGENQVVPWSCASSSSPPPPPTVTSSSEGEISTGAGVTSKRMRKC 180

Query: 181 GVDLDSDDEIESCSAPPSTRPFFNDEATSSSSLRPLKQARVTGPTQSITSTPDDEACKAE 240
            VDL+SDD IE  SA  STRPFFN+EATSSSS RPLKQ+RVTGPTQS ++TPDDEA KA+
Sbjct: 181 DVDLESDDGIECSSARQSTRPFFNEEATSSSSYRPLKQSRVTGPTQSPSTTPDDEAYKAD 240

Query: 241 LKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274
           LKST+VVRSIQ+LQNR PTDINDASKMIFGICKMSRDQNR
Sbjct: 241 LKSTSVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 279

[Close]

BLAST of CsGy3G039200 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 156.0 bits (393), Expect = 4.4e-38
Identity = 102/211 (48.34%), Postives = 125/211 (59.24%), Query Frame = 0


Query: 3   KCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKL 62
           KC+LC   ARM+CESDQA+LCWDCD KVH ANFLVAKH+R LLC  CQS TPW A+G +L
Sbjct: 4   KCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLRL 63

Query: 63  TPTVSVCEGCV---------------------QVHDGKCDQERRRENEVEVDDGDDFVDD 122
            PT SVCE CV                     +V+  + +++R RE+  + DD + + DD
Sbjct: 64  GPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAESYDDD 123

Query: 123 EGFDSYEGGDSEEYDDGEEDDDEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEIS 182
           E  D     D E  DD +EDDDE+ DDE+ ENQVVPWS A+      PP ++SSS    S
Sbjct: 124 EEEDE----DEEYSDDEDEDDDEDGDDEEAENQVVPWSAAAQ----VPPVMSSSSSDGGS 183

Query: 183 AGAGVASKRMREYGVDLDSDDEIESCSAPPS 193
            G+     R RE    L SDDEI S SA  S
Sbjct: 184 GGSVTKRTRARENSDLLCSDDEIGSSSAQGS 206

[Close]

BLAST of CsGy3G039200 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-26
Identity = 89/205 (43.41%), Postives = 116/205 (56.59%), Query Frame = 0


Query: 3   KCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKL 62
           KCELC   ARM+CESDQA+LCWDCD KVH ANFLVAKH R LLC  CQS TPW ASG  L
Sbjct: 5   KCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNL 64

Query: 63  TPTVSVCEGCVQVHDGKCDQERRRENEVEVDDGDDFVDDEGFDSYEGGDSEEYDDGEEDD 122
            PTVS+CE C+          R++ N   +   D  ++ E         +E YD   E+ 
Sbjct: 65  GPTVSICESCL---------ARKKNNNSSLAGRDQNLNQEEEIIGCNDGAESYD---EES 124

Query: 123 DEEEDDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGVDLDSDD 182
           DE+E++E+ ENQVVP     ++     P V+SSS   +S+G G    +     +DL+  D
Sbjct: 125 DEDEEEEEVENQVVP-----AAVEQELPVVSSSS--SVSSGEGDQVVKRTRLDLDLNLSD 184

Query: 183 EIESCSAPPSTRPFFNDEATSSSSL 208
           E E+ S P   +    DE  S S++
Sbjct: 185 E-ENQSRP--LKRLSRDEGLSRSTV 187

[Close]

BLAST of CsGy3G039200 vs. TAIR 10
Match: AT5G48250.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 65.5 bits (158), Expect = 7.8e-11
Identity = 36/78 (46.15%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 4  CELCGHQARM-FCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKL 63
          C+ CG Q  M +C SD A LC  CD  VH AN L  +HSRTL+C  C +     AS R  
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQ---PASVRCS 64

Query: 64 TPTVSVCEGC-VQVHDGK 80
             VS+C+ C    HDGK
Sbjct: 65 DERVSLCQNCDWSGHDGK 79

[Close]

BLAST of CsGy3G039200 vs. TAIR 10
Match: AT3G07650.1 (CONSTANS-like 9 )

HSP 1 Score: 62.8 bits (151), Expect = 5.1e-10
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 4  CELCGHQARM-FCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKL 63
          C+ CG Q  M +C SD A LC  CD  VH AN L  +HSRTL+C  C +     A+ R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 64 TPTVSVCEGC 73
             VS+C+ C
Sbjct: 65 EERVSLCQNC 71

[Close]

BLAST of CsGy3G039200 vs. TAIR 10
Match: AT3G07650.2 (CONSTANS-like 9 )

HSP 1 Score: 62.8 bits (151), Expect = 5.1e-10
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 4  CELCGHQARM-FCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGRKL 63
          C+ CG Q  M +C SD A LC  CD  VH AN L  +HSRTL+C  C +     A+ R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 64 TPTVSVCEGC 73
             VS+C+ C
Sbjct: 65 EERVSLCQNC 71

The following BLAST results are available for this feature:

BLAST of CsGy3G039200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUA9	1.1e-09	46.15	Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE...	[more]
Q9SSE5	7.1e-09	44.29	Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1...	[more]
Q1G3I2	9.3e-09	48.08	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
Q9LJB7	1.2e-08	41.03	B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1	[more]
O23379	1.2e-08	43.66	Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CsGy3G039200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146838.1	2.89e-190	99.27	zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus] >KGN59860.1 hypothetical p...	[more]
XP_008454616.1	3.47e-182	94.89	PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo] >KAA0036743.1 zinc...	[more]
XP_038899463.1	1.94e-163	85.92	nucleolin [Benincasa hispida]	[more]
XP_022139730.1	6.11e-155	82.62	protein BFR2 [Momordica charantia]	[more]
XP_023535120.1	5.23e-153	83.15	protein BFR2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G039200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCX6	1.40e-190	99.27	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850640 ...	[more]
A0A5D3B734	1.68e-182	94.89	Zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BZT7	1.68e-182	94.89	zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103494983 PE=4...	[more]
A0A6J1CD44	2.96e-155	82.62	protein BFR2 OS=Momordica charantia OX=3673 GN=LOC111010576 PE=4 SV=1	[more]
A0A6J1IMI6	3.43e-151	82.86	protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111476916 PE=4 SV=1	[more]

BLAST of CsGy3G039200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27310.1	4.4e-38	48.34	B-box type zinc finger family protein	[more]
AT5G54470.1	1.0e-26	43.41	B-box type zinc finger family protein	[more]
AT5G48250.1	7.8e-11	46.15	B-box type zinc finger protein with CCT domain	[more]
AT3G07650.1	5.1e-10	44.29	CONSTANS-like 9	[more]
AT3G07650.2	5.1e-10	44.29	CONSTANS-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 3..45 e-value: 3.9E-7 score: 39.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 2..42 e-value: 1.1E-5 score: 25.5
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..45 score: 9.655472
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..133
None	No IPR available	PANTHER	PTHR31717:SF60	OS08G0178800 PROTEIN	coord: 3..236
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 3..236
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 3..45 e-value: 5.83622E-12 score: 57.3075

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G039200.1	CsGy3G039200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding