CsGy3G035360 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G035360
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	ribosomal RNA small subunit methyltransferase NEP1
Location	Gy14Chr3: 33906348 .. 33908825 (-)
RNA-Seq Expression	CsGy3G035360
Synteny	CsGy3G035360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACTAAGCTTCGACTACCGTCAAGGAAGTTCCTGCTCGGACGAACCATGGTTCGACCATTTGCGGCGAAGGGGAAGAAGAGAAAGAAGTCGGAGAAATACGACAGAGACGAAGATGCCGAAGAATCCACCTCTCCGTCCAAGAAAGTTATGTTGGAGAACGAACCTGATGAAGAACCAGCCAAGGAGGACTTTCATGAACTTGAAGGTATTCCTATTGCTCCGAAAGACCCCAAGAATGATAGCAATGCTGGTGTTATCTTCATCCTTGAAAGAGCTTCTCTGGAAGTTGCCAAAGTTGGGAAGGTAATGTATTGTTTTTCACTTACTGCTTTGAAGTTTTAGGATTTCCTTCATTTTGGGCGTTTAACAAAGTTATTTCATGCTTTTTATGAATTTTAAGAAGCTAATTATTGATTTTATATTCTTGGATTTCCATGTTTCGTGCTTATAGAATTACCAGCTGTTGAATTCTGATGACCACTCCAATTATTTGCGGAGGAATAACAGAAATCCTGGGGATTATAGACCTGATATCTTGCATCAAGTAAGTTGTTGTAGCTCATTGTTGTTTTTTCCCCAATGAAATAGGGAATTGTTTTATGGAATGAAAAATATAATTTTGTATGTTGATTATTTGGGTTTCAGTAGTGATATTAAATGTAAATGATTCAGGCGCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGAAGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGAAATTAAACCATACGTTCGTCTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTGTAAGTGGATTTGCTTGTTCTAATTTTGCTGGACATCTCTGTTATTTGAGTGTGTTGTAATCAATGCAATTTCCCCTTTTATAGACCTTTCCATTGATCTTTTGACAAATGCTTCGCAGTGCAATTGCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCTTTCGGGTGATAAAGAACCCTGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGTAAGCCAATGCATGTCTTCCTCTTTTGTGGGTTTTGGTAGAAACTTTTCATACTCTTTTCTTGCATACCAGGCTTCTCGCATAGTTCGGATAAGTTGGTCAAGGTGCGAAATTATCTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTATCTTCAAACCTCCTAACTGAAAATTACACTTTTTAATGCTTCATTTTTAGATGTATAACGTATGACAACTTCCCTTTATTGCTATGTATTAGGTGGGTGCAATGGCTCATGGGAAAATTGAGACTGATTACACGGATGATCTATTAGCAAGTAAGTTCGTTTACTTTTGCGTGTTTATTCAAGTAATCACATGGGAGTAAATTACCACATAACTATATTTACCTTTAACTTGAAAGTTTTTGACACACTGCGCTCCAAATTACCCTGTCTAACCTATGTTAACCATGGGTTCCAACTACACTACGGAACTCATTGTCAAACTTAAAAACATAATAACACAACACTATTTTGGATATATTGTTGGTATGCCAGGTTAGTTTGGGGCGGAGTGTCTCAAAATTTTCAAGTACTTGTGATTTAGTTATTCATCTGCAGTATGAGATAGAAATTATCATTTAGAAAATGGGTATCAACAGATATTAGCTAGAAAAGGTCTGAGTAAGAGGAAAAAGTCTATAAAGTATCAACAGAGAGAAGTTCGGGGGGCAAAAGTCTATAAAGTAAGAGGAAAAGCAGTACGGTAGAAGGGTTTTAAAGTTCTAACTATTTAAAAAGCATTTCCCAAGATGTCATAGAGTGGATATTGCTTCATAATTGTAACATTTTTATTAGTTAGCAATTGCTCAAACTTCTACTGTTATTCTTGGGTAGTATAAATTTTGTATGAAGTTAAATCCATTGCCTTGGCCTTGGGAATCCTAAATTCTTCAATTTATGCTATATTTGTGCAGTTTCTGAATATCCTCTTAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGAACTCTGCTTACAACTCCATCAAAATCAGTGCCTCAACTATCTTGTTTCATATGTTTAGTTATTATTTCAGAAAATATGATCCAGCAGAGTTTTTAGGTTTATTAGTGGAACCATAATAGATCAATATTCCATTTTTTAAATTAAAATATTAATACCTCTTCTAAATTTAATTGAAAGCATAGAACTTTTAGCTGTAAGAAGTGATTGTACTGAATTTTGTCTGAGTTCTTTGCTGTTATCACTTGTGAAGTAAAAGTTTCAACTTATTTATGTCCATTCAATAGGTTGAAATTGAAATCGAGGGTATGTAAGAATTGATCCACGAACTCAGTTTTTTTCCCCTTCCAATATTTGAGATTAGTTGTATTTCAATGGTAACAAAG

mRNA sequence

GCACTAAGCTTCGACTACCGTCAAGGAAGTTCCTGCTCGGACGAACCATGGTTCGACCATTTGCGGCGAAGGGGAAGAAGAGAAAGAAGTCGGAGAAATACGACAGAGACGAAGATGCCGAAGAATCCACCTCTCCGTCCAAGAAAGTTATGTTGGAGAACGAACCTGATGAAGAACCAGCCAAGGAGGACTTTCATGAACTTGAAGGTATTCCTATTGCTCCGAAAGACCCCAAGAATGATAGCAATGCTGGTGTTATCTTCATCCTTGAAAGAGCTTCTCTGGAAGTTGCCAAAGTTGGGAAGAATTACCAGCTGTTGAATTCTGATGACCACTCCAATTATTTGCGGAGGAATAACAGAAATCCTGGGGATTATAGACCTGATATCTTGCATCAAGCGCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGAAGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGAAATTAAACCATACGTTCGTCTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTTGCAATTGCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCTTTCGGGTGATAAAGAACCCTGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGCTTCTCGCATAGTTCGGATAAGTTGGTCAAGGTGCGAAATTATCTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACTGATTACACGGATGATCTATTAGCAATTTCTGAATATCCTCTTAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGAACTCTGCTTACAACTCCATCAAAATCAGTGCCTCAACTATCTTGTTTCATATGTTTAGTTATTATTTCAGAAAATATGATCCAGCAGAGTTTTTAGGTTTATTAGTGGAACCATAATAGATCAATATTCCATTTTTTAAATTAAAATATTAATACCTCTTCTAAATTTAATTGAAAGCATAGAACTTTTAGCTGTAAGAAGTGATTGTACTGAATTTTGTCTGAGTTCTTTGCTGTTATCACTTGTGAAGTAAAAGTTTCAACTTATTTATGTCCATTCAATAGGTTGAAATTGAAATCGAGGGTATGTAAGAATTGATCCACGAACTCAGTTTTTTTCCCCTTCCAATATTTGAGATTAGTTGTATTTCAATGGTAACAAAG

Coding sequence (CDS)

ATGGTTCGACCATTTGCGGCGAAGGGGAAGAAGAGAAAGAAGTCGGAGAAATACGACAGAGACGAAGATGCCGAAGAATCCACCTCTCCGTCCAAGAAAGTTATGTTGGAGAACGAACCTGATGAAGAACCAGCCAAGGAGGACTTTCATGAACTTGAAGGTATTCCTATTGCTCCGAAAGACCCCAAGAATGATAGCAATGCTGGTGTTATCTTCATCCTTGAAAGAGCTTCTCTGGAAGTTGCCAAAGTTGGGAAGAATTACCAGCTGTTGAATTCTGATGACCACTCCAATTATTTGCGGAGGAATAACAGAAATCCTGGGGATTATAGACCTGATATCTTGCATCAAGCGCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGAAGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGAAATTAAACCATACGTTCGTCTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTTGCAATTGCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCTTTCGGGTGATAAAGAACCCTGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGCTTCTCGCATAGTTCGGATAAGTTGGTCAAGGTGCGAAATTATCTGGATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACTGATTACACGGATGATCTATTAGCAATTTCTGAATATCCTCTTAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGA

Protein sequence

MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG*

Homology

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BLAST of CsGy3G035360 vs. ExPASy Swiss-Prot
Match: O35130 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus musculus OX=10090 GN=Emg1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.8e-48
Identity = 98/205 (47.80%), Postives = 136/205 (66.34%), Query Frame = 0


Query: 70  VIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAK 129
           +I +LE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +
Sbjct: 43  LIVVLEGASLETVKVGKTYELLNCDRHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNR 102

Query: 130 AGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKN 189
           AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL KLS+ AA   +KL +VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 162

Query: 190 PVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLA 249
           PV+ + P  C K+G S S + +  +R   + V     +VFVVGA AHGK+  +YT+ +++
Sbjct: 163 PVSDHFPVGCMKIGTSFSVEDISDIR---ELVPSSDPVVFVVGAFAHGKVSVEYTEKMVS 222

Query: 250 ISEYPLSASCCIADICKDLAEKWNV 275
           IS YPLSA+   A +     E W V
Sbjct: 223 ISNYPLSAALTCAKVTTAFEEVWGV 243

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BLAST of CsGy3G035360 vs. ExPASy Swiss-Prot
Match: Q92979 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Homo sapiens OX=9606 GN=EMG1 PE=1 SV=4)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-47
Identity = 106/241 (43.98%), Postives = 148/241 (61.41%), Query Frame = 0


Query: 39  EPDEEPAKEDFHELEGIPIAPKDPKNDSNAGV-----IFILERASLEVAKVGKNYQLLNS 98
           +P E    E   + + +P  PK P+  +   +     I +LE ASLE  KVGK Y+LLN 
Sbjct: 9   KPRERSGGEQAQDWDALP--PKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKTYELLNC 68

Query: 99  DDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVR 158
           D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R
Sbjct: 69  DKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQ-VYIHTQKNVLIEVNPQTR 128

Query: 159 LPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVK 218
           +PRT  RF G+M+QLL KLS+ AA   +KL +VIKNPV+ + P  C K+G S S   +  
Sbjct: 129 IPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSD 188

Query: 219 VRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWN 275
           VR   + V     +VFVVGA AHGK+  +YT+ +++IS YPLSA+   A +     E W 
Sbjct: 189 VR---ELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWG 243

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BLAST of CsGy3G035360 vs. ExPASy Swiss-Prot
Match: Q9W4J5 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Drosophila melanogaster OX=7227 GN=CG3527 PE=3 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-46
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 0


Query: 64  NDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIF 123
           N +   +I +LE A LE  KV   ++LLN DDH+  +R+N R+PG  RPDI HQ LL +F
Sbjct: 37  NATEKRLIIVLEGAQLETVKVHNTFELLNCDDHAGIMRKNQRDPGSCRPDITHQCLLMLF 96

Query: 124 DSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKL 183
           DS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF G+M+QLL K  I A     +L
Sbjct: 97  DSPLNRAGLLQ-VFVRTEHNVLIEINPQTRIPRTFKRFAGLMVQLLHKFQIRANDSSRRL 156

Query: 184 FRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYL-----DAVKDDVDLVFVVGAMAHGK 243
             VIKNP+T ++P  C+K   S S   L   R+ +      +   D  +V V+GA AHG 
Sbjct: 157 MSVIKNPITDHVPVGCKKYAMSFSGKLLPNCRDLVPHGDETSASYDEPVVIVIGAFAHGV 216

Query: 244 IETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV 275
           ++TDYT++L +IS YPLSA+   + IC    E W V
Sbjct: 217 LKTDYTEELFSISNYPLSAAIACSKICSAFEEVWGV 251

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BLAST of CsGy3G035360 vs. ExPASy Swiss-Prot
Match: Q06287 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EMG1 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.1e-45
Identity = 99/230 (43.04%), Postives = 141/230 (61.30%), Query Frame = 0


Query: 55  IPIAPK--DPKNDSNAGVIFILERASLEVAKVGKN------YQLLNSDDHSNYLRRNNRN 114
           +P AP     K+     +I +L  ASLE  K+  N      Y LLN DDH   L++  R+
Sbjct: 24  VPQAPPVLTSKDKITKRMIVVLAMASLETHKISSNGPGGDKYVLLNCDDHQGLLKKMGRD 83

Query: 115 PGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVML 174
             + RPDI HQ LL + DS I KAG+L+ VY++T +G+LIE+ P VR+PRT KRF G+M+
Sbjct: 84  ISEARPDITHQCLLTLLDSPINKAGKLQ-VYIQTSRGILIEVNPTVRIPRTFKRFSGLMV 143

Query: 175 QLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVD 234
           QLL KLSI +    EKL +VIKNP+T +LP  CRK+  S  +  +++V++Y++ + DD  
Sbjct: 144 QLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDA-PVIRVQDYIEKLDDDES 203

Query: 235 LVFVVGAMAHGK--IETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV 275
           +   VGAMA GK     +Y D+ + +S YPLSAS   +  C    + WN+
Sbjct: 204 ICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWNI 251

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BLAST of CsGy3G035360 vs. ExPASy Swiss-Prot
Match: Q9XX15 (Ribosomal RNA small subunit methyltransferase nep-1 OS=Caenorhabditis elegans OX=6239 GN=Y39A1A.14 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.7e-45
Identity = 95/202 (47.03%), Postives = 131/202 (64.85%), Query Frame = 0


Query: 73  ILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGR 132
           +LE  SLE AKVG  Y +L+SD H+N+LR+  ++P DYRPDILHQ LL + DS + +AG+
Sbjct: 31  VLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCLLNLLDSPLNRAGK 90

Query: 133 LKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVT 192
           L+ V+ +T K +L+++ P  R+PRT  RF G+M+QLL KLSI AA   +KL  V+KNPV+
Sbjct: 91  LR-VFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAETTQKLMSVVKNPVS 150

Query: 193 QYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISE 252
            +LP   RKM  S +  +L  + N L A + D  LV ++G +A GKI  DY D    IS 
Sbjct: 151 NHLPVGSRKMLMSFNVPELT-MANKLVAPETDEPLVLIIGGIARGKIVVDYNDSETKISN 210

Query: 253 YPLSASCCIADICKDLAEKWNV 275
           YPLSA+   A +   L E W +
Sbjct: 211 YPLSAALTCAKVTSGLEEIWGI 230

[Close]

BLAST of CsGy3G035360 vs. NCBI nr
Match: XP_004136640.2 (ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus] >KAE8651185.1 hypothetical protein Csa_001834 [Cucumis sativus])

HSP 1 Score: 539 bits (1388), Expect = 5.63e-193
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK 60
           MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK
Sbjct: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK 60

Query: 61  DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120
           DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL
Sbjct: 61  DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120

Query: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180
           AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR
Sbjct: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180

Query: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE 240
           EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE
Sbjct: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE 240

Query: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275

[Close]

BLAST of CsGy3G035360 vs. NCBI nr
Match: XP_008443268.1 (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo] >KAA0053876.1 ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo var. makuwa] >TYK25528.1 ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo var. makuwa])

HSP 1 Score: 524 bits (1350), Expect = 3.49e-187
Identity = 265/275 (96.36%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK 60
           MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PK
Sbjct: 1   MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPK 60

Query: 61  DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120
           DPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL
Sbjct: 61  DPKTDNNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120

Query: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180
           AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR
Sbjct: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180

Query: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE 240
           EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIE
Sbjct: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIE 240

Query: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275

[Close]

BLAST of CsGy3G035360 vs. NCBI nr
Match: XP_038905075.1 (ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida])

HSP 1 Score: 500 bits (1287), Expect = 1.40e-177
Identity = 252/275 (91.64%), Postives = 263/275 (95.64%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK 60
           MVRPFAAKGKKRKKSEKYDRD+D  EST P+KK   ENEPDEEP KEDFHELEGIPI PK
Sbjct: 1   MVRPFAAKGKKRKKSEKYDRDDDDGESTVPAKKPTAENEPDEEPPKEDFHELEGIPIVPK 60

Query: 61  DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120
           DP +D +AGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LR+NNRNPGDYRPDILHQALL
Sbjct: 61  DPNSDKHAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRKNNRNPGDYRPDILHQALL 120

Query: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180
           AIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR
Sbjct: 121 AIFDSRIAKAGRLKAVYVKTEKGLLIEVKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180

Query: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE 240
           EKLFRVIKNPVTQYLPAN RKMGFSHSSDKLVK+RNYLDAV+DDVDLVFVVGAMAHGKIE
Sbjct: 181 EKLFRVIKNPVTQYLPANSRKMGFSHSSDKLVKMRNYLDAVEDDVDLVFVVGAMAHGKIE 240

Query: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           TDYTDDLLAISEYPLSASCCIADICKDLAEKWN+G
Sbjct: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNIG 275

[Close]

BLAST of CsGy3G035360 vs. NCBI nr
Match: KAG7017643.1 (Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 495 bits (1274), Expect = 1.55e-175
Identity = 252/279 (90.32%), Postives = 267/279 (95.70%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIP 60
           MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIP
Sbjct: 1   MVRPFAAKGKKRKKTERYDRDDDGEESTASAKKAMVENEPDEQPENEAAEENFHELEGIP 60

Query: 61  IAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILH 120
           I PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPDILH
Sbjct: 61  IVPKDPKSDSKAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILH 120

Query: 121 QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA 180
           QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA
Sbjct: 121 QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA 180

Query: 181 AGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAH 240
           AGKREKLFRVIKNPVTQYLP+N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAH
Sbjct: 181 AGKREKLFRVIKNPVTQYLPSNSRKMGFSHSSDKLVKVRTYLDAVEDDVDLVFVVGAMAH 240

Query: 241 GKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           GKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Sbjct: 241 GKIETGYTDDLLAISEYPLSASCCIADICKDLADKWNVG 279

[Close]

BLAST of CsGy3G035360 vs. NCBI nr
Match: XP_022935622.1 (ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata] >KAG6580885.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 495 bits (1274), Expect = 1.55e-175
Identity = 252/279 (90.32%), Postives = 267/279 (95.70%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIP 60
           MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIP
Sbjct: 1   MVRPFAAKGKKRKKAERYDRDDDGEESTASAKKAMVENEPDEQPENEAAEENFHELEGIP 60

Query: 61  IAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILH 120
           I PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPDILH
Sbjct: 61  IVPKDPKSDSKAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILH 120

Query: 121 QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA 180
           QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA
Sbjct: 121 QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA 180

Query: 181 AGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAH 240
           AGKREKLFRVIKNPVTQYLP+N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAH
Sbjct: 181 AGKREKLFRVIKNPVTQYLPSNSRKMGFSHSSDKLVKVRTYLDAVEDDVDLVFVVGAMAH 240

Query: 241 GKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           GKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Sbjct: 241 GKIETGYTDDLLAISEYPLSASCCIADICKDLADKWNVG 279

[Close]

BLAST of CsGy3G035360 vs. ExPASy TrEMBL
Match: A0A0A0LFI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821550 PE=3 SV=1)

HSP 1 Score: 539 bits (1388), Expect = 8.86e-193
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK 60
           MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK
Sbjct: 33  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK 92

Query: 61  DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120
           DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL
Sbjct: 93  DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 152

Query: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180
           AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR
Sbjct: 153 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 212

Query: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE 240
           EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE
Sbjct: 213 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE 272

Query: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 273 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 307

[Close]

BLAST of CsGy3G035360 vs. ExPASy TrEMBL
Match: A0A5D3DPQ6 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006800 PE=3 SV=1)

HSP 1 Score: 524 bits (1350), Expect = 1.69e-187
Identity = 265/275 (96.36%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK 60
           MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PK
Sbjct: 1   MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPK 60

Query: 61  DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120
           DPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL
Sbjct: 61  DPKTDNNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120

Query: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180
           AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR
Sbjct: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180

Query: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE 240
           EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIE
Sbjct: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIE 240

Query: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275

[Close]

BLAST of CsGy3G035360 vs. ExPASy TrEMBL
Match: A0A1S3B7L0 (ribosomal RNA small subunit methyltransferase NEP1 OS=Cucumis melo OX=3656 GN=LOC103486891 PE=3 SV=1)

HSP 1 Score: 524 bits (1350), Expect = 1.69e-187
Identity = 265/275 (96.36%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK 60
           MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PK
Sbjct: 1   MVRPFAAKGKKRKKAEKYDRDEDGEESSSPAKKVMVENEPDEEPPKEDFHELEGIPIVPK 60

Query: 61  DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120
           DPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL
Sbjct: 61  DPKTDNNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL 120

Query: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180
           AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR
Sbjct: 121 AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR 180

Query: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE 240
           EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIE
Sbjct: 181 EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKMRNYLDAVKDDVDLVFVVGAMAHGKIE 240

Query: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Sbjct: 241 TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275

[Close]

BLAST of CsGy3G035360 vs. ExPASy TrEMBL
Match: A0A6J1F634 (ribosomal RNA small subunit methyltransferase nep-1 OS=Cucurbita moschata OX=3662 GN=LOC111442430 PE=3 SV=1)

HSP 1 Score: 495 bits (1274), Expect = 7.50e-176
Identity = 252/279 (90.32%), Postives = 267/279 (95.70%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIP 60
           MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIP
Sbjct: 1   MVRPFAAKGKKRKKAERYDRDDDGEESTASAKKAMVENEPDEQPENEAAEENFHELEGIP 60

Query: 61  IAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILH 120
           I PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPDILH
Sbjct: 61  IVPKDPKSDSKAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILH 120

Query: 121 QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA 180
           QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA
Sbjct: 121 QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA 180

Query: 181 AGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAH 240
           AGKREKLFRVIKNPVTQYLP+N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAH
Sbjct: 181 AGKREKLFRVIKNPVTQYLPSNSRKMGFSHSSDKLVKVRTYLDAVEDDVDLVFVVGAMAH 240

Query: 241 GKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           GKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Sbjct: 241 GKIETGYTDDLLAISEYPLSASCCIADICKDLADKWNVG 279

[Close]

BLAST of CsGy3G035360 vs. ExPASy TrEMBL
Match: A0A6J1J0G6 (ribosomal RNA small subunit methyltransferase nep-1 OS=Cucurbita maxima OX=3661 GN=LOC111482341 PE=3 SV=1)

HSP 1 Score: 493 bits (1268), Expect = 6.16e-175
Identity = 251/279 (89.96%), Postives = 266/279 (95.34%), Query Frame = 0


Query: 1   MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIP 60
           MVRPFAAKGKKRKK+E+YDRD+D EES + +KK M+ENEPDE+P    A+E+FHELEGIP
Sbjct: 1   MVRPFAAKGKKRKKTERYDRDDDGEESIASAKKAMVENEPDEQPENEAAEENFHELEGIP 60

Query: 61  IAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILH 120
           I PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDHSN+LRRNNRNPGDYRPDILH
Sbjct: 61  IVPKDPKSDSKAGVIFVLERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILH 120

Query: 121 QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA 180
           QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA
Sbjct: 121 QALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA 180

Query: 181 AGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAH 240
           AGKREKLFRVIKNPVTQYLP+N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAH
Sbjct: 181 AGKREKLFRVIKNPVTQYLPSNSRKMGFSHSSDKLVKVRTYLDAVEDDVDLVFVVGAMAH 240

Query: 241 GKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG 275
           GKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Sbjct: 241 GKIETGYTDDLLAISEYPLSASCCIADICKDLADKWNVG 279

[Close]

BLAST of CsGy3G035360 vs. TAIR 10
Match: AT3G57000.1 (nucleolar essential protein-related )

HSP 1 Score: 299.7 bits (766), Expect = 2.5e-81
Identity = 167/300 (55.67%), Postives = 212/300 (70.67%), Query Frame = 0


Query: 1   MVRPFAAKGKKRK-KSEKYDRDED-------------AEESTSPSKK---VMLENEPDEE 60
           MVRP+  K  KRK + E+YD++ED             A ES+  +KK      E + DEE
Sbjct: 1   MVRPYGIKVNKRKEREERYDKEEDEVEEQPKFEQKQKARESSKKAKKESTSRAEEDNDEE 60

Query: 61  -------PAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH 120
                   A ED   + GIPI    P N   +G++F+LE+ASLEVAKVGK YQLLNSDDH
Sbjct: 61  EVTVEATAAAEDI--VGGIPIVLNAP-NKEKSGIVFVLEKASLEVAKVGKTYQLLNSDDH 120

Query: 121 SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPR 180
           +N+L++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PR
Sbjct: 121 ANFLKKNNRNPADYRPDITHQALLMILDSPVNKAGRLKAVYVRTEKGVLFEVKPHVRIPR 180

Query: 181 TQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQ-YLPANCRKMGFSHSSDKLVKVR 240
           T KRF G+MLQLLQKLSITA   REKL R +KNP+ + +LP N  ++GFSHSS+KLV ++
Sbjct: 181 TFKRFAGIMLQLLQKLSITAVNSREKLLRCVKNPIEEHHLPVNSHRIGFSHSSEKLVNMQ 240

Query: 241 NYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV 275
            +L  V  DD D VFVVGAMAHGKI+ +Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Sbjct: 241 KHLATVCDDDRDTVFVVGAMAHGKIDCNYIDEFVSVSEYPLSAAYCISRICEALATNWNI 297

The following BLAST results are available for this feature:

BLAST of CsGy3G035360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O35130	7.8e-48	47.80	Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus musculus OX=10090 GN=E...	[more]
Q92979	3.0e-47	43.98	Ribosomal RNA small subunit methyltransferase NEP1 OS=Homo sapiens OX=9606 GN=EM...	[more]
Q9W4J5	1.1e-46	44.91	Ribosomal RNA small subunit methyltransferase NEP1 OS=Drosophila melanogaster OX...	[more]
Q06287	2.1e-45	43.04	Ribosomal RNA small subunit methyltransferase NEP1 OS=Saccharomyces cerevisiae (...	[more]
Q9XX15	4.7e-45	47.03	Ribosomal RNA small subunit methyltransferase nep-1 OS=Caenorhabditis elegans OX...	[more]

BLAST of CsGy3G035360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136640.2	5.63e-193	100.00	ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus] >KAE865118...	[more]
XP_008443268.1	3.49e-187	96.36	PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo] >KA...	[more]
XP_038905075.1	1.40e-177	91.64	ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]	[more]
KAG7017643.1	1.55e-175	90.32	Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrospe...	[more]
XP_022935622.1	1.55e-175	90.32	ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata] >KAG658...	[more]

BLAST of CsGy3G035360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFI3	8.86e-193	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821550 PE=3 SV=1	[more]
A0A5D3DPQ6	1.69e-187	96.36	Ribosomal RNA small subunit methyltransferase NEP1 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3B7L0	1.69e-187	96.36	ribosomal RNA small subunit methyltransferase NEP1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1F634	7.50e-176	90.32	ribosomal RNA small subunit methyltransferase nep-1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1J0G6	6.16e-175	89.96	ribosomal RNA small subunit methyltransferase nep-1 OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of CsGy3G035360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57000.1	2.5e-81	55.67	nucleolar essential protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	PFAM	PF03587	EMG1	coord: 72..267 e-value: 1.3E-66 score: 224.2
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	PANTHER	PTHR12636	NEP1/MRA1	coord: 8..274
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	CDD	cd18088	Nep1-like	coord: 70..265 e-value: 5.44474E-96 score: 279.03
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 70..274 e-value: 4.7E-82 score: 276.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..50
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 62..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G035360.2	CsGy3G035360.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070475	rRNA base methylation
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0070037	rRNA (pseudouridine) methyltransferase activity