CsGy3G034910 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G034910
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 33531194 .. 33531857 (-)
RNA-Seq ExpressionCsGy3G034910
SyntenyCsGy3G034910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATAGAGAAGATGACTTTTCTCACAAGGGTATGGTTTGAGTTTGACCTAAAAATTCTTCTTTTACAGATCATCATGTGCATTGGTCTCGCATGGCTTCCTTTAGAAGCCGGCACGTCCATATGTCATTCAACCAAAAACAAATACTTTAAAATGGATTTCCCTCTTTCGCCTTTAAACCGCCATCACAGCTCTCACCTGATCCAACGATGGCGATGCCTTCAGGATCAGCCATCCATGTATTGTGGACCCACAGACAACCTTGCCGTTGAAAAAGTTTCGGATTTTTTTTCTTGGGTTTTCAGTCATAATTGGCAGCCCGGAAGGAAACGGATAGTTTCATCATTTTTTCGATACGAAAATCGATTGGAGAGAGACACTGAGATTTTCGTGGTGAAATTAAACGCTGGAATTCCGGGTACGTTTTAATTTCTTCACATCTTTAAAGGGATTTCGGGTTCTGCTCTGTTCTTCTTTAGGACAAATAATCGTGGGTACTTTTTCTTAATCGAAAATTTGATCATAATCTTGTTAGTTTTTTATTTGGGGATGTGATTTTATCGATCTAGACTGAAGGGGTTTTGGCGTTTCGTTGCCTTGTTTGACTTTTGATGTAGTGACCGGAAATTTTCAATTTGTAGGCTGGGAAATTTGGCTTTGA

mRNA sequence

ATGATGATAGAGAAGATGACTTTTCTCACAAGGGTATGGTTTGAGTTTGACCTAAAAATTCTTCTTTTACAGATCATCATGTGCATTGGTCTCGCATGGCTTCCTTTAGAAGCCGGCACGTCCATATGTCATTCAACCAAAAACAAATACTTTAAAATGGATTTCCCTCTTTCGCCTTTAAACCGCCATCACAGCTCTCACCTGATCCAACGATGGCGATGCCTTCAGGATCAGCCATCCATGTATTGTGGACCCACAGACAACCTTGCCGTTGAAAAAGTTTCGGATTTTTTTTCTTGGGTTTTCAGTCATAATTGGCAGCCCGGAAGGAAACGGATAGTTTCATCATTTTTTCGATACGAAAATCGATTGGAGAGAGACACTGAGATTTTCGTGGTGAAATTAAACGCTGGAATTCCGGGCTGGGAAATTTGGCTTTGA

Coding sequence (CDS)

ATGATGATAGAGAAGATGACTTTTCTCACAAGGGTATGGTTTGAGTTTGACCTAAAAATTCTTCTTTTACAGATCATCATGTGCATTGGTCTCGCATGGCTTCCTTTAGAAGCCGGCACGTCCATATGTCATTCAACCAAAAACAAATACTTTAAAATGGATTTCCCTCTTTCGCCTTTAAACCGCCATCACAGCTCTCACCTGATCCAACGATGGCGATGCCTTCAGGATCAGCCATCCATGTATTGTGGACCCACAGACAACCTTGCCGTTGAAAAAGTTTCGGATTTTTTTTCTTGGGTTTTCAGTCATAATTGGCAGCCCGGAAGGAAACGGATAGTTTCATCATTTTTTCGATACGAAAATCGATTGGAGAGAGACACTGAGATTTTCGTGGTGAAATTAAACGCTGGAATTCCGGGCTGGGAAATTTGGCTTTGA

Protein sequence

MMIEKMTFLTRVWFEFDLKILLLQIIMCIGLAWLPLEAGTSICHSTKNKYFKMDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKRIVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL*
Homology
[Close]
BLAST of CsGy3G034910 vs. NCBI nr
Match: KGN59400.1 (hypothetical protein Csa_001971 [Cucumis sativus])

HSP 1 Score: 211 bits (537), Expect = 3.03e-68
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 53  MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR 112
           MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR
Sbjct: 1   MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR 60

Query: 113 IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL 146
           IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL
Sbjct: 61  IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL 94

[Close]
BLAST of CsGy3G034910 vs. NCBI nr
Match: KAG7027726.1 (Protein EFR3-like B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.6 bits (166), Expect = 3.33e-10
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 68  LIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKRI 113
           +IQ+WRCLQ+QPS++CGPTDNLAVEKV D F +VFS    P   R+
Sbjct: 1   MIQQWRCLQNQPSLHCGPTDNLAVEKVGDSFLYVFSFRGIPATARL 46

[Close]
BLAST of CsGy3G034910 vs. ExPASy TrEMBL
Match: A0A0A0LBJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816130 PE=4 SV=1)

HSP 1 Score: 211 bits (537), Expect = 1.47e-68
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 53  MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR 112
           MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR
Sbjct: 1   MDFPLSPLNRHHSSHLIQRWRCLQDQPSMYCGPTDNLAVEKVSDFFSWVFSHNWQPGRKR 60

Query: 113 IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL 146
           IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL
Sbjct: 61  IVSSFFRYENRLERDTEIFVVKLNAGIPGWEIWL 94

The following BLAST results are available for this feature:
BLAST of CsGy3G034910 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G034910 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59400.13.03e-68100.00hypothetical protein Csa_001971 [Cucumis sativus][more]
KAG7027726.13.33e-1063.04Protein EFR3-like B, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CsGy3G034910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBJ91.47e-68100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816130 PE=4 SV=1[more]
BLAST of CsGy3G034910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G034910.2CsGy3G034910.2mRNA