CsGy3G033670 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G033670
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	GTP-binding protein like
Location	Gy14Chr3: 32625662 .. 32625980 (+)
RNA-Seq Expression	CsGy3G033670
Synteny	CsGy3G033670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTACTAGAGAAGTTTACGAACAGAAGCTAAGAAGAGGCAATCTCTACCATGAACCCACTACGAATCCAGGGCTCGGATCGCCTCGTTGCCCTCGCTGTTTTTCTCTTCTTAAACCCGACCCTGTATTTGTCTCTTCTTCTTCTTCTTCTATTAAGCACCTTCTACTACTTAAGTTTTTTAGTTTTGGGATTCATGTTTGAGTTTTACTATGTTTTGATTCAGGATAAAAGTGAATGGGCCATCAATCCTGTTCTCCACGGTGTTACTGCTGTGGTGAGTTGCCATCGTTCCGATCTTCGATTTTATTTGCTTTGA

mRNA sequence

ATGGGTACTAGAGAAGTTTACGAACAGAAGCTAAGAAGAGGCAATCTCTACCATGAACCCACTACGAATCCAGGGCTCGGATCGCCTCGTTGCCCTCGCTGTTTTTCTCTTCTTAAACCCGACCCTGTATTTGTCTCTTCTTCTTCTTCTTCTATTAAGCACCTTCTACTACTTAAGTTTTTTAGTTTTGGGATTCATGATAAAAGTGAATGGGCCATCAATCCTGTTCTCCACGGTGTTACTGCTGTGGTGAGTTGCCATCGTTCCGATCTTCGATTTTATTTGCTTTGA

Coding sequence (CDS)

ATGGGTACTAGAGAAGTTTACGAACAGAAGCTAAGAAGAGGCAATCTCTACCATGAACCCACTACGAATCCAGGGCTCGGATCGCCTCGTTGCCCTCGCTGTTTTTCTCTTCTTAAACCCGACCCTGTATTTGTCTCTTCTTCTTCTTCTTCTATTAAGCACCTTCTACTACTTAAGTTTTTTAGTTTTGGGATTCATGATAAAAGTGAATGGGCCATCAATCCTGTTCTCCACGGTGTTACTGCTGTGGTGAGTTGCCATCGTTCCGATCTTCGATTTTATTTGCTTTGA

Protein sequence

MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKFFSFGIHDKSEWAINPVLHGVTAVVSCHRSDLRFYLL*

Homology

[Close]

BLAST of CsGy3G033670 vs. NCBI nr
Match: KAE8651129.1 (hypothetical protein Csa_002251 [Cucumis sativus])

HSP 1 Score: 169 bits (428), Expect = 2.16e-51
Identity = 82/91 (90.11%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYEQKLRRGNLYHEPT NPGLGSPRCPRCFSLLKPDPVFVSSSSS IKHLLLLKF
Sbjct: 1  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPVFVSSSSS-IKHLLLLKF 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
          FSFGIHDKSEWAINPVLHGVTAV       L
Sbjct: 61 FSFGIHDKSEWAINPVLHGVTAVAGSGLGGL 90

[Close]

BLAST of CsGy3G033670 vs. NCBI nr
Match: XP_011652076.1 (uncharacterized protein LOC101220824 [Cucumis sativus])

HSP 1 Score: 117 bits (294), Expect = 2.47e-31
Identity = 59/91 (64.84%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYEQKLRRGNLYHEPT NPGLGSPRCPRCFSLLKPDP                  
Sbjct: 1  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
                DKSEWAINPVLHGVTAV       L
Sbjct: 61 ------DKSEWAINPVLHGVTAVAGSGLGGL 67

[Close]

BLAST of CsGy3G033670 vs. NCBI nr
Match: XP_038904167.1 (uncharacterized protein LOC120090522 [Benincasa hispida] >XP_038904168.1 uncharacterized protein LOC120090522 [Benincasa hispida])

HSP 1 Score: 116 bits (291), Expect = 8.34e-31
Identity = 58/91 (63.74%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYE+KLRRGNLYHEPT NPGLGSPRCPRCFSLLKPDP                  
Sbjct: 1  MGTREVYEEKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
                DKSEWAINPVLHGVTAV       L
Sbjct: 61 ------DKSEWAINPVLHGVTAVAGSGLGGL 67

[Close]

BLAST of CsGy3G033670 vs. NCBI nr
Match: XP_023538973.1 (uncharacterized protein LOC111799746 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 114 bits (284), Expect = 8.82e-30
Identity = 57/91 (62.64%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYEQKLRRGNLYHEPT NPGLGSPRCPRCFSLLKPDP                  
Sbjct: 1  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
                DKSEWAINPVLH  TAV       L
Sbjct: 61 ------DKSEWAINPVLHSTTAVAGSGLGGL 67

[Close]

BLAST of CsGy3G033670 vs. NCBI nr
Match: XP_008443017.1 (PREDICTED: uncharacterized protein LOC103486742 [Cucumis melo])

HSP 1 Score: 112 bits (280), Expect = 3.87e-29
Identity = 56/91 (61.54%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYEQKLR GNLYHEPT NPGLGSPRCPRCFSLLKPDP                  
Sbjct: 1  MGTREVYEQKLRSGNLYHEPTMNPGLGSPRCPRCFSLLKPDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
                DKSEWA+NPVLH VTAV       L
Sbjct: 61 ------DKSEWAVNPVLHDVTAVAGSGLGGL 67

[Close]

BLAST of CsGy3G033670 vs. ExPASy TrEMBL
Match: A0A0A0LEC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G798610 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 1.19e-31
Identity = 59/91 (64.84%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYEQKLRRGNLYHEPT NPGLGSPRCPRCFSLLKPDP                  
Sbjct: 1  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
                DKSEWAINPVLHGVTAV       L
Sbjct: 61 ------DKSEWAINPVLHGVTAVAGSGLGGL 67

[Close]

BLAST of CsGy3G033670 vs. ExPASy TrEMBL
Match: A0A1S3B6K8 (uncharacterized protein LOC103486742 OS=Cucumis melo OX=3656 GN=LOC103486742 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 1.87e-29
Identity = 56/91 (61.54%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYEQKLR GNLYHEPT NPGLGSPRCPRCFSLLKPDP                  
Sbjct: 1  MGTREVYEQKLRSGNLYHEPTMNPGLGSPRCPRCFSLLKPDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
                DKSEWA+NPVLH VTAV       L
Sbjct: 61 ------DKSEWAVNPVLHDVTAVAGSGLGGL 67

[Close]

BLAST of CsGy3G033670 vs. ExPASy TrEMBL
Match: A0A6J1L0N8 (uncharacterized protein LOC111498779 OS=Cucurbita maxima OX=3661 GN=LOC111498779 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 3.46e-29
Identity = 56/91 (61.54%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYEQKLRRGNLYHEPT NPGLGSPRCPRCFSLLKPDP                  
Sbjct: 1  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
                D SEWAINPVLH  TAV       L
Sbjct: 61 ------DTSEWAINPVLHSTTAVAGSGLGGL 67

[Close]

BLAST of CsGy3G033670 vs. ExPASy TrEMBL
Match: A0A6J1FZY6 (uncharacterized protein LOC111449402 OS=Cucurbita moschata OX=3662 GN=LOC111449402 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 1.40e-28
Identity = 55/91 (60.44%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYEQKLRRGNLYHEPT NPGLGSPRCPRCFSLL+PDP                  
Sbjct: 1  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVSCHRSDL 91
                D SEWAINPVLH  TAV       L
Sbjct: 61 ------DTSEWAINPVLHSTTAVAGSGLGGL 67

[Close]

BLAST of CsGy3G033670 vs. ExPASy TrEMBL
Match: A0A6J1DD33 (uncharacterized protein LOC111019374 OS=Momordica charantia OX=3673 GN=LOC111019374 PE=4 SV=1)

HSP 1 Score: 107 bits (266), Expect = 2.47e-27
Identity = 53/85 (62.35%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTREVYE+KLRRGNLYHEPT NPGLGSPRCPRCFSLL  DP                  
Sbjct: 1  MGTREVYEEKLRRGNLYHEPTMNPGLGSPRCPRCFSLLNSDP------------------ 60

Query: 61 FSFGIHDKSEWAINPVLHGVTAVVS 85
                DKSEWAINPVLH  TAV  
Sbjct: 61 ------DKSEWAINPVLHDATAVAG 61

[Close]

BLAST of CsGy3G033670 vs. TAIR 10
Match: AT2G41945.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-16
Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTR+VYE+KLRRGNL ++PT NPGLGS RCPRC SLL P+                   
Sbjct: 1  MGTRQVYEEKLRRGNLDYDPTMNPGLGSARCPRCLSLLNPN------------------- 59

Query: 61 FSFGIHDKSEWAINPVLHGVTAV 84
                +K EW I PVLH   AV
Sbjct: 61 -----SEKGEWTITPVLHDAAAV 59

[Close]

BLAST of CsGy3G033670 vs. TAIR 10
Match: AT2G41945.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-16
Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTR+VYE+KLRRGNL ++PT NPGLGS RCPRC SLL P+                   
Sbjct: 1  MGTRQVYEEKLRRGNLDYDPTMNPGLGSARCPRCLSLLNPN------------------- 59

Query: 61 FSFGIHDKSEWAINPVLHGVTAV 84
                +K EW I PVLH   AV
Sbjct: 61 -----SEKGEWTITPVLHDAAAV 59

[Close]

BLAST of CsGy3G033670 vs. TAIR 10
Match: AT2G41945.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-16
Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 1  MGTREVYEQKLRRGNLYHEPTTNPGLGSPRCPRCFSLLKPDPVFVSSSSSSIKHLLLLKF 60
          MGTR+VYE+KLRRGNL ++PT NPGLGS RCPRC SLL P+                   
Sbjct: 1  MGTRQVYEEKLRRGNLDYDPTMNPGLGSARCPRCLSLLNPN------------------- 59

Query: 61 FSFGIHDKSEWAINPVLHGVTAV 84
                +K EW I PVLH   AV
Sbjct: 61 -----SEKGEWTITPVLHDAAAV 59

The following BLAST results are available for this feature:

BLAST of CsGy3G033670 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G033670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651129.1	2.16e-51	90.11	hypothetical protein Csa_002251 [Cucumis sativus]	[more]
XP_011652076.1	2.47e-31	64.84	uncharacterized protein LOC101220824 [Cucumis sativus]	[more]
XP_038904167.1	8.34e-31	63.74	uncharacterized protein LOC120090522 [Benincasa hispida] >XP_038904168.1 unchara...	[more]
XP_023538973.1	8.82e-30	62.64	uncharacterized protein LOC111799746 [Cucurbita pepo subsp. pepo]	[more]
XP_008443017.1	3.87e-29	61.54	PREDICTED: uncharacterized protein LOC103486742 [Cucumis melo]	[more]

BLAST of CsGy3G033670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEC4	1.19e-31	64.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G798610 PE=4 SV=1	[more]
A0A1S3B6K8	1.87e-29	61.54	uncharacterized protein LOC103486742 OS=Cucumis melo OX=3656 GN=LOC103486742 PE=...	[more]
A0A6J1L0N8	3.46e-29	61.54	uncharacterized protein LOC111498779 OS=Cucurbita maxima OX=3661 GN=LOC111498779...	[more]
A0A6J1FZY6	1.40e-28	60.44	uncharacterized protein LOC111449402 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]
A0A6J1DD33	2.47e-27	62.35	uncharacterized protein LOC111019374 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]

BLAST of CsGy3G033670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41945.1	2.2e-16	49.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G41945.2	2.2e-16	49.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G41945.3	2.2e-16	49.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34459	OS01G0264500 PROTEIN	coord: 1..85
None	No IPR available	PANTHER	PTHR34459:SF2	TRANSMEMBRANE PROTEIN	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G033670.2	CsGy3G033670.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity