CsGy3G032675 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G032675
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 31861461 .. 31862209 (+)
RNA-Seq ExpressionCsGy3G032675
SyntenyCsGy3G032675
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATATTTTAATTAACGTTCATCTTTCACAATAAATAGGGAAGCTCTCCAGAGGAAAGAATATAGAAGCAAAAAAGAAAACTTGAGAAAAGAGTTAAAAGAGAAAACACGAGAGCCAAAGATGGAGGGGAAGAAGCTAGCTTTGGTGGTGCTGATGGTGATGACGATATTTACGTGCTCTTTAGCTCAGGATGCCTTAAACGACGACAAACGTCAGTTCGAGAAAAATGAAAACAAAGAGTACATTCAGCTATTCTCCGATGGCAGTAACGACAAAGGAGTAAGGTACAAAGACGATTACTCAAGAAAGATGATGAAAGAGGCACCAACACCGACACCAACACCGCCGCCACCACCCATCTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCGATTGCGATGAACCCTGCTTTTGCAACATTCCAATGGGTGCAACAAGGGGAAATTGTGTTTTGTATTAATTAATTCCTTTCCATGTTACATTATGCATGCATGTAAGCTTAACTATTTGCTTTCATATTGATGAATGTGAACTGCAAATAATTATAAATAAAAGTGGAAAAGGTCAGTTAAGTACTGATCTTTTGCTAGTTATTATTATTATATATATCTATATATGAATTGTTTCATCTTTGTAAAGTTTTCTTTTCAAAACACCATTCACCTTTCGTACGTGAACTTTTTAAGGGTGTGTTCCAGGGAAAAGGTTATGGAAAAAGGGTTATATCCTTTCCTTGTTTGGTTCCCC

mRNA sequence

TAATATTTTAATTAACGTTCATCTTTCACAATAAATAGGGAAGCTCTCCAGAGGAAAGAATATAGAAGCAAAAAAGAAAACTTGAGAAAAGAGTTAAAAGAGAAAACACGAGAGCCAAAGATGGAGGGGAAGAAGCTAGCTTTGGTGGTGCTGATGGTGATGACGATATTTACGTGCTCTTTAGCTCAGGATGCCTTAAACGACGACAAACGTCAGTTCGAGAAAAATGAAAACAAAGAGTACATTCAGCTATTCTCCGATGGCAGTAACGACAAAGGAGTAAGGTACAAAGACGATTACTCAAGAAAGATGATGAAAGAGGCACCAACACCGACACCAACACCGCCGCCACCACCCATCTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCGATTGCGATGAACCCTGCTTTTGCAACATTCCAATGGGTGCAACAAGGGGAAATTGTGTTTTGTATTAATTAATTCCTTTCCATGTTACATTATGCATGCATGTAAGCTTAACTATTTGCTTTCATATTGATGAATGTGAACTGCAAATAATTATAAATAAAAGTGGAAAAGGTCAGTTAAGTACTGATCTTTTGCTAGTTATTATTATTATATATATCTATATATGAATTGTTTCATCTTTGTAAAGTTTTCTTTTCAAAACACCATTCACCTTTCGTACGTGAACTTTTTAAGGGTGTGTTCCAGGGAAAAGGTTATGGAAAAAGGGTTATATCCTTTCCTTGTTTGGTTCCCC

Coding sequence (CDS)

ATGGAGGGGAAGAAGCTAGCTTTGGTGGTGCTGATGGTGATGACGATATTTACGTGCTCTTTAGCTCAGGATGCCTTAAACGACGACAAACGTCAGTTCGAGAAAAATGAAAACAAAGAGTACATTCAGCTATTCTCCGATGGCAGTAACGACAAAGGAGTAAGGTACAAAGACGATTACTCAAGAAAGATGATGAAAGAGGCACCAACACCGACACCAACACCGCCGCCACCACCCATCTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCGATTGCGATGAACCCTGCTTTTGCAACATTCCAATGGGTGCAACAAGGGGAAATTGTGTTTTGTATTAA

Protein sequence

MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY*
Homology
[Close]
BLAST of CsGy3G032675 vs. NCBI nr
Match: KGN59161.1 (hypothetical protein Csa_002402 [Cucumis sativus])

HSP 1 Score: 242 bits (617), Expect = 9.12e-81
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60
           MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY
Sbjct: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60

Query: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113
           SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY
Sbjct: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113

[Close]
BLAST of CsGy3G032675 vs. NCBI nr
Match: TYK30388.1 (hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 190 bits (483), Expect = 2.60e-60
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKD 60
           MEGKKLALVV+M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+
Sbjct: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKN 60

Query: 61  DYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113
           DYSRKM+KEAPTPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  DYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114

[Close]
BLAST of CsGy3G032675 vs. NCBI nr
Match: KAA0043852.1 (hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (440), Expect = 6.61e-54
Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 12  MVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKDDYSRKMMKEAP 71
           M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+DYSRKM+KEAP
Sbjct: 1   MTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAP 60

Query: 72  TPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113
           TPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  TPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 103

[Close]
BLAST of CsGy3G032675 vs. NCBI nr
Match: KAG6580718.1 (hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 105 bits (263), Expect = 4.97e-27
Identity = 58/115 (50.43%), Postives = 70/115 (60.87%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60
           MEGKK+ALVVL+V   FT +LA++                  QL +DGSND+    + D 
Sbjct: 1   MEGKKVALVVLLVTMAFTSALARN------------------QLIADGSNDRAGSDEYDE 60

Query: 61  SRKMMKEAP--TPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113
             KM + AP   P P P P P CFGNFCGGGLL CDEPCFC IPMG+ RG+CV +
Sbjct: 61  LIKMAEGAPEAAPEPAPSPRPSCFGNFCGGGLLPCDEPCFCFIPMGSQRGSCVDF 97

[Close]
BLAST of CsGy3G032675 vs. ExPASy TrEMBL
Match: A0A0A0LGQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 4.41e-81
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60
           MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY
Sbjct: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60

Query: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113
           SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY
Sbjct: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113

[Close]
BLAST of CsGy3G032675 vs. ExPASy TrEMBL
Match: A0A5D3E3L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9509G00010 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 1.26e-60
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKD 60
           MEGKKLALVV+M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+
Sbjct: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKN 60

Query: 61  DYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113
           DYSRKM+KEAPTPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  DYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114

[Close]
BLAST of CsGy3G032675 vs. ExPASy TrEMBL
Match: A0A5A7TKL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001870 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 3.20e-54
Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 12  MVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKDDYSRKMMKEAP 71
           M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+DYSRKM+KEAP
Sbjct: 1   MTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAP 60

Query: 72  TPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113
           TPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  TPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 103

The following BLAST results are available for this feature:
BLAST of CsGy3G032675 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G032675 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59161.19.12e-81100.00hypothetical protein Csa_002402 [Cucumis sativus][more]
TYK30388.12.60e-6079.13hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa][more]
KAA0043852.16.61e-5477.88hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa][more]
KAG6580718.14.97e-2750.43hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CsGy3G032675 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGQ34.41e-81100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1[more]
A0A5D3E3L21.26e-6079.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TKL83.20e-5477.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of CsGy3G032675 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G032675.1CsGy3G032675.1mRNA