CsGy3G032490 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTATGTTCTCCCTTCTCTTCTTACTTTCCATTATATAAATTTCCCCCACAATTTGTGAATAAAGATGAAAACAAAAACTTCTTTCTCTCTTCACCTTCTTAACAAAAAAAAATATGTTGAAGAATAGGGTGCCATCTTTGAAGAAAGTAGCCAAAGGGAACAACGGGGAGCGACGACATGAGGATTCTCTACTAGCGTCGGAGATGGAGGCGGACGGGGGACGATGCCCTACACCGAGGGGGTGTGTGGCTTTGTATGTGGGAGAAGAATGCAGGAGATTTGTGGTACCAACTAGGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGATAAAACCTATAAGGAGTTTGGATTTAATCAGAAAAGTGGTCTTGTGGTTTCTTGTAGTGTTTTTGCTTTCCAAGAGATTTTGAACACTATTGAAGCCAATCATGGTAGCTTCCATTTTGGTGAACTTGTTCATGAGTTCCTTTGATCCAAGCTTTATGGGGTTCTTTTTTGTTAGTGTTTGAGTGGAAATAGAAAAAAT CTTTATGTTCTCCCTTCTCTTCTTACTTTCCATTATATAAATTTCCCCCACAATTTGTGAATAAAGATGAAAACAAAAACTTCTTTCTCTCTTCACCTTCTTAACAAAAAAAAATATGTTGAAGAATAGGGTGCCATCTTTGAAGAAAGTAGCCAAAGGGAACAACGGGGAGCGACGACATGAGGATTCTCTACTAGCGTCGGAGATGGAGGCGGACGGGGGACGATGCCCTACACCGAGGGGGTGTGTGGCTTTGTATGTGGGAGAAGAATGCAGGAGATTTGTGGTACCAACTAGGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGATAAAACCTATAAGGAGTTTGGATTTAATCAGAAAAGTGGTCTTGTGGTTTCTTGTAGTGTTTTTGCTTTCCAAGAGATTTTGAACACTATTGAAGCCAATCATGGTAGCTTCCATTTTGGTGAACTTGTTCATGAGTTCCTTTGATCCAAGCTTTATGGGGTTCTTTTTTGTTAGTGTTTGAGTGGAAATAGAAAAAAT ATGTTGAAGAATAGGGTGCCATCTTTGAAGAAAGTAGCCAAAGGGAACAACGGGGAGCGACGACATGAGGATTCTCTACTAGCGTCGGAGATGGAGGCGGACGGGGGACGATGCCCTACACCGAGGGGGTGTGTGGCTTTGTATGTGGGAGAAGAATGCAGGAGATTTGTGGTACCAACTAGGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGATAAAACCTATAAGGAGTTTGGATTTAATCAGAAAAGTGGTCTTGTGGTTTCTTGTAGTGTTTTTGCTTTCCAAGAGATTTTGAACACTATTGAAGCCAATCATGGTAGCTTCCATTTTGGTGAACTTGTTCATGAGTTCCTTTGA MLKNRVPSLKKVAKGNNGERRHEDSLLASEMEADGGRCPTPRGCVALYVGEECRRFVVPTRFLCHPLFKMVLDKTYKEFGFNQKSGLVVSCSVFAFQEILNTIEANHGSFHFGELVHEFL* Homology
BLAST of CsGy3G032490 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-08 Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08 Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08 Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.5e-08 Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.7e-08 Identity = 26/74 (35.14%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of CsGy3G032490 vs. NCBI nr
Match: KAA0043872.1 (auxin-responsive protein SAUR15-like [Cucumis melo var. makuwa]) HSP 1 Score: 228 bits (580), Expect = 6.55e-75 Identity = 112/120 (93.33%), Postives = 116/120 (96.67%), Query Frame = 0
BLAST of CsGy3G032490 vs. NCBI nr
Match: KAG6596577.1 (Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175 bits (443), Expect = 4.90e-54 Identity = 87/120 (72.50%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of CsGy3G032490 vs. NCBI nr
Match: KAE8651093.1 (hypothetical protein Csa_002638 [Cucumis sativus]) HSP 1 Score: 120 bits (302), Expect = 3.60e-33 Identity = 70/120 (58.33%), Postives = 70/120 (58.33%), Query Frame = 0
BLAST of CsGy3G032490 vs. NCBI nr
Match: XP_007145296.1 (hypothetical protein PHAVU_007G227100g [Phaseolus vulgaris] >ESW17290.1 hypothetical protein PHAVU_007G227100g [Phaseolus vulgaris]) HSP 1 Score: 122 bits (305), Expect = 6.46e-33 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of CsGy3G032490 vs. NCBI nr
Match: XP_015898653.1 (auxin-induced protein 15A [Ziziphus jujuba]) HSP 1 Score: 121 bits (304), Expect = 8.90e-33 Identity = 64/126 (50.79%), Postives = 83/126 (65.87%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy TrEMBL
Match: A0A0A0LAX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777530 PE=3 SV=1) HSP 1 Score: 246 bits (628), Expect = 1.56e-82 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy TrEMBL
Match: A0A5A7TKN6 (Auxin-responsive protein SAUR15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002080 PE=3 SV=1) HSP 1 Score: 228 bits (580), Expect = 3.17e-75 Identity = 112/120 (93.33%), Postives = 116/120 (96.67%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy TrEMBL
Match: A0A2N9IKH4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54048 PE=3 SV=1) HSP 1 Score: 122 bits (306), Expect = 2.14e-33 Identity = 65/126 (51.59%), Postives = 82/126 (65.08%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy TrEMBL
Match: V7BJR9 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G227100g PE=3 SV=1) HSP 1 Score: 122 bits (305), Expect = 3.13e-33 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of CsGy3G032490 vs. ExPASy TrEMBL
Match: A0A6P4AQB8 (auxin-induced protein 15A OS=Ziziphus jujuba OX=326968 GN=LOC107432098 PE=3 SV=1) HSP 1 Score: 121 bits (304), Expect = 4.31e-33 Identity = 64/126 (50.79%), Postives = 83/126 (65.87%), Query Frame = 0
BLAST of CsGy3G032490 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.4 bits (241), Expect = 8.1e-21 Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = 0
BLAST of CsGy3G032490 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 75.5 bits (184), Expect = 3.3e-14 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CsGy3G032490 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 75.5 bits (184), Expect = 3.3e-14 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CsGy3G032490 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13 Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of CsGy3G032490 vs. TAIR 10
Match: AT3G20220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 64.7 bits (156), Expect = 5.9e-11 Identity = 37/95 (38.95%), Postives = 59/95 (62.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|